FC876281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876281 vs. ExPASy Swiss-Prot
Match: FLA1_ARATH (Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana GN=FLA1 PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 2.761e-72 Identity = 116/169 (68.64%), Postives = 144/169 (85.21%), Query Frame = 1 Query: 136 AHNITRILAGHPSFSTFNHYLSVTHLADEINRKTTITVCAIDNAGMSELLSKHPSITTVKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGSAPGSSGFVNITDLKGGKVGFGAKDNGGKLDALFVKSVEEKPYNISVIQISKVLSSDVAEAPAPGPAELISLGL 642 AHN+TR+LA HPSFS+F+H+L+ THLADEINR+ TITVCA+DNA MS L SK +++T+KN+LSLH+LLDYFG KKLHQI +G+ALAAT+FQATG+APG+SGFVNITDL+GGKVGFG +GG L + FVKS+EE PYNIS+IQIS+VL S+ A AP P PAE+ G+ Sbjct: 24 AHNVTRLLANHPSFSSFSHFLTQTHLADEINRRRTITVCAVDNAAMSALTSKGYTLSTLKNILSLHVLLDYFGTKKLHQIRDGSALAATLFQATGAAPGTSGFVNITDLRGGKVGFG--PDGGDLSSFFVKSIEEVPYNISIIQISRVLPSETAAAPTPAPAEMNLTGI 190 HSP 2 Score: 51.6026 bits (122), Expect = 2.761e-72 Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 3 Query: 630 LTGIMSAHGCKQFADALLANADASKTYXDAAIGGM 734 LTGIMSAHGCK FA+ LL N ASKTY ++ GGM Sbjct: 187 LTGIMSAHGCKVFAETLLTNPGASKTYQESLEGGM 221
BLAST of FC876281 vs. ExPASy Swiss-Prot
Match: FLA2_ARATH (Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana GN=FLA2 PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 9.322e-61 Identity = 108/165 (65.45%), Postives = 134/165 (81.21%), Query Frame = 1 Query: 136 AHNITRILAGHPSFSTFNHYLSVTHLADEINRKTTITVCAIDNAGMSELLSKHPSITTVKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGSAPGSSGFVNITDLKGGKVGFGAKDNGGKLDALFVKSVEEKPYNISVIQISKVLSSDVAEAPAPGPAELI 630 AHNITRILA P FSTFNHYLS THLADEINR+ TITV A+DN+ MS +LS S+ ++N+LSLH+L+DYFG KKLHQIT+G+ A+MFQ+TGSA G+SG++NITD+KGGKV FG +D+ KL A +VKSV EKPYNISV+ IS+VL+S AEAP P++LI Sbjct: 26 AHNITRILAKDPDFSTFNHYLSATHLADEINRRQTITVLAVDNSAMSSILSNGYSLYQIRNILSLHVLVDYFGTKKLHQITDGSTSTASMFQSTGSATGTSGYINITDIKGGKVAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSPEAEAPTASPSDLI 190 HSP 2 Score: 31.5722 bits (70), Expect = 9.322e-61 Identity = 15/35 (42.86%), Postives = 21/35 (60.00%), Query Frame = 3 Query: 630 LTGIMSAHGCKQFADALLANADASKTYXDAAIGGM 734 LT I+ GCK F+D +L + A KT+ D GG+ Sbjct: 191 LTTILEKQGCKAFSD-ILKSTGADKTFQDTVDGGL 224
BLAST of FC876281 vs. ExPASy Swiss-Prot
Match: FLA8_ARATH (Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana GN=FLA8 PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 7.345e-48 Identity = 89/160 (55.62%), Postives = 123/160 (76.88%), Query Frame = 1 Query: 136 AHNITRILAGHPSFSTFNHYLSVTHLADEINRKTTITVCAIDNAGMSELLSKHPSITTVKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGSAPGSSGFVNITDLKGGKVGFGAKDNGGKLDALFVKSVEEKPYNISVIQI-SKVLSSDVAEAPAP 612 +HNIT+ILA P +S+FN YLS T LADEIN +TTITV ++N MS L KHP ++ +K+ LSL +LLDY+ +KLH+I+ GT L+ T++Q TG+APG+ GFVNITDLKGGKVGFG+ +G KLD+ + KSV++ PYNIS+++I + +++ V APAP Sbjct: 25 SHNITQILADSPDYSSFNSYLSQTKLADEINSRTTITVLVLNNGAMSALAGKHP-LSVIKSALSLLVLLDYYDPQKLHKISKGTTLSTTLYQTTGNAPGNLGFVNITDLKGGKVGFGSAASGSKLDSSYTKSVKQIPYNISILEIDAPIIAPGVLTAPAP 183 HSP 2 Score: 28.4906 bits (62), Expect = 7.345e-48 Identity = 14/35 (40.00%), Postives = 21/35 (60.00%), Query Frame = 3 Query: 630 LTGIMSAHGCKQFADALLANADASKTYXDAAIGGM 734 +TG++ GCK FA+ LL ++ KTY A G+ Sbjct: 190 ITGLLEKAGCKTFAN-LLVSSGVLKTYESAVEKGL 223
BLAST of FC876281 vs. ExPASy Swiss-Prot
Match: FLA10_ARATH (Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana GN=FLA10 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.127e-45 Identity = 89/162 (54.94%), Postives = 119/162 (73.46%), Query Frame = 1 Query: 139 HNITRILAGHPSFSTFNHYLSVTHLADEINRKTTITVCAIDNAGMSELLSKHPSITTVKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGSAPGSSGFVNITDLKGGKVGFGAKDNGGKLDALFVKSVEEKPYNISVIQI-SKVLSSDVAEAPAPGPA 621 HNIT+IL+ P +S+FN+YLS T LADEIN +TTITV ++N MS L KHP ++ VKN LSL +LLDY+ KLHQ++ GT L T++Q TG A G+ GFVN+TDLKGGKVGFG+ G KLD+ + KSV++ PYNISV++I + +++ + APAP A Sbjct: 26 HNITQILSDTPEYSSFNNYLSQTKLADEINSRTTITVLVLNNGAMSSLAGKHP-LSVVKNALSLLVLLDYYDPLKLHQLSKGTTLTTTLYQTTGHALGNLGFVNVTDLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEINAPIIAPGILTAPAPSSA 186 HSP 2 Score: 25.409 bits (54), Expect = 1.127e-45 Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 3 Query: 630 LTGIMSAHGCKQFADALLANADASKTYXDAAIGGM 734 +TG++ GCK FA+ LL ++ KT+ G+ Sbjct: 191 ITGLLEKAGCKTFAN-LLVSSGVIKTFESTVEKGL 224
BLAST of FC876281 vs. ExPASy Swiss-Prot
Match: FLA14_ARATH (Fasciclin-like arabinogalactan protein 14 OS=Arabidopsis thaliana GN=FLA14 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.953e-29 Identity = 72/166 (43.37%), Postives = 95/166 (57.23%), Query Frame = 1 Query: 142 NITRILAGHPSFSTFNHYLSVTHLADEINRKTTITVCAIDNAGMSELLSKHPSITTVKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGSAPGSSGFVNITDLKGGKVGFGAKDNGGKLDALFVKSVEEKPYNISVIQISKVLSSDVA--EAPAPGPAELIS 633 NIT IL H FS FN LS T LA IN++ TITV + N +S L + S+ +K +LSLHI+LDY+ KKL ++ T L T+FQ++G A G GF+N T +K G V FG+ G LDA +V P+NISV+ IS + DV AP P +S Sbjct: 25 NITNILNEHDDFSNFNQLLSETQLASTINKRQTITVLVVSNGALSSLSGQPTSV--IKKILSLHIVLDYYDQKKLKNLSKKTVLLTTLFQSSGLARGQQGFLNATVMKNGDVAFGSAVPGSSLDAQLQDTVAALPFNISVLHISSAIMIDVKGDNAPTASPLSPVS 188
BLAST of FC876281 vs. ExPASy Swiss-Prot
Match: FLA3_ARATH (Fasciclin-like arabinogalactan protein 3 OS=Arabidopsis thaliana GN=FLA3 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.360e-21 Identity = 58/161 (36.02%), Postives = 88/161 (54.66%), Query Frame = 1 Query: 136 AHNITRILAGHPSFSTFNHYLSVTHLADEINRKTTITVCAIDNAGMSELLSKHPSITTVKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGSAPGSSGFVNITDLKGGKVGFGAKDNGGKLDALFVKSVEEKPYNISVIQISKVLSSDVAEAPAPGP 618 A NITR+L +P FST L+ T L IN++ TITV A++N + + + VKN+L H++LDYF KL + + L T++Q+TG +GF+N T GK+ FG+ G A ++ +V PYN+SV+QIS + + +P P Sbjct: 24 AVNITRVLEKYPEFSTMTELLAKTELTPIINKRQTITVLALNNDAIGSISGRPEE--EVKNILMNHVVLDYFDELKLKALKEKSTLLTTLYQSTGLGQQQNGFLNCTK-SNGKIYFGSGVKGAPQTAEYITTVFRNPYNLSVVQISMPIVAPGLGSPVKVP 181
BLAST of FC876281 vs. ExPASy Swiss-Prot
Match: FLA5_ARATH (Fasciclin-like arabinogalactan protein 5 OS=Arabidopsis thaliana GN=FLA5 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17 Identity = 56/186 (30.11%), Postives = 92/186 (49.46%), Query Frame = 1 Query: 136 AHNITRILAGHPSFSTFNHYLSVTHLADEINRKTTITVCAIDNAGMSELLSKHPSITTVKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGSAPGSSGFVNITDLKGGKVGFGAKDNGGKLDALFVKSVEEKPYNISVIQISKVLSS------------------------DVAEAPAPGPA 621 A+NIT + FST T L I++ TITV A+ N +S + ++ S ++N+L H++LDY+ KL + + + T++Q TG +GF+N++ K G+V FG++ L+A +V +V PYN+S+IQI+ + + D + PAPGPA Sbjct: 24 ANNITLAFQKYSKFSTMRDLFIKTKLIAAIDKYQTITVLAVSNDAISSITNR--SEVELRNILMTHVILDYYDELKLQGMREKSIMLTTLYQTTGLGEQMNGFLNVSKSK-GRVYFGSEVKNSPLNAEYVSTVYHNPYNLSIIQITMPIVAPGLSLAIFPPPPPYVHVAPYPTPMDASVVPAPGPA 206 The following BLAST results are available for this feature:
BLAST of FC876281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876281 ID=FC876281; Name=FC876281; organism=Citrus clementina; type=EST; length=734bpback to top |