FC876423
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876423 vs. ExPASy Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2) HSP 1 Score: 337.035 bits (863), Expect = 5.048e-92 Identity = 166/219 (75.80%), Postives = 194/219 (88.58%), Query Frame = 3 Query: 3 VKLELTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLRNWKDSLKALQTCDDILPYAEELNITKRCIESLAVKASTDPNLFGWPVVEHGGPMQSPGGSVLWNGISTGARPKNSTSDWWYEDVSTLSLPLYKRLIDVMESRGIRQEIIAGSLTFYAKKYLPGLNRRQG--DSSTRLA-PVALGAPPSEEEQKLLLEEIDKLLPVQKGLVSA*F 650 VKLELTASNVVYLRCAAEHLEMTEE+G+GNLI+QTETF NQVVL++WKDS+KAL +CD++L YA+ELNITK+CIESLA++ASTDPNLFGWPVVEHGGPMQSPGGSVLWNGISTGARPK+++SDWWYED S LS PL+KRLI VMESRGIR++IIAGSLT+Y +K+LPGL RR+G +SS R + P+ G SEEEQK LLEEI +LL +QKGLV F Sbjct: 92 VKLELTASNVVYLRCAAEHLEMTEEHGEGNLISQTETFFNQVVLKSWKDSIKALHSCDEVLEYADELNITKKCIESLAMRASTDPNLFGWPVVEHGGPMQSPGGSVLWNGISTGARPKHTSSDWWYEDASMLSFPLFKRLITVMESRGIREDIIAGSLTYYTRKHLPGLKRRRGGPESSGRFSTPLGSGNVLSEEEQKNLLEEIQELLRMQKGLVPTKF 310
BLAST of FC876423 vs. ExPASy Swiss-Prot
Match: NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.803e-34 Identity = 91/267 (34.08%), Postives = 134/267 (50.19%), Query Frame = 3 Query: 9 LELTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLRNWKDSLKALQTCDDILPYAEELNITKRCIESLAVKASTDPNLFGWPVV--------EHGGPMQSPGG-------SVLWN-GISTGARPKNST--------SDWWYEDVSTLSLPLYKRLIDVMESRGIRQEIIAGSLTFYAKKYLPGLNRRQGDSSTRLAP----------------------------VALGAPPSEEEQKLLLEEIDKLLPVQKGLVSA*FL 653 ++LTA+N+ LRCAAE+LEMTEE +GNLI +TE FL+ VVL +W+DS+ L++C+ + P+AE L I +RC ES+A KA +P W GGP GG S WN G G K S+ +DWW+EDVS L + + R++ ++ +G+R ++I ++T YA K+LPGL + +T P V EQ++++E I + P Q+ VS FL Sbjct: 124 VDLTAANISGLRCAAEYLEMTEEMEEGNLIFKTEAFLSYVVLSSWRDSIAVLKSCEALSPWAENLQIVRRCSESIAWKACANPRGVRWAYTGAGAGSGGARGGPAAIRGGGGSGGTASPRWNVGGGGGGESKESSPSRQAVPPADWWFEDVSVLRIDHFVRVVTAIKVKGMRFDLIGAAITHYASKWLPGLTKDAPLGATHDEPWAQASAAGVGGGGLHMMIISGAGGGKDDVLAACSAPSREQRMVVESIISITPPQRDSVSCGFL 390
BLAST of FC876423 vs. ExPASy Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.635e-32 Identity = 79/201 (39.30%), Postives = 118/201 (58.71%), Query Frame = 3 Query: 3 VKLELTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLRNWKDSLKALQTCDDILPYAEELNITKRCIESLAVKASTDPNLFGWPVVEHGGPMQSP------GGSVLWN---GISTGARPKNSTS------DWWYEDVSTLSLPLYKRLIDVMESRGIRQEIIAGSLTFYAKKYLPGLNRRQGDSSTRLAPVALG 560 V ++LTA+N+ LRCAAE+LEMTE+ +GNLI +TE FL+ VVL +W+DS+ L++C+ + P+AE L I +RC ES+A KA ++P W + G SP G S WN S P +T+ DWW+EDVS L + + R+I ++ +G+R E++ + YA K+LPGL + G + A+G Sbjct: 115 VPVDLTATNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRW---AYTGKAPSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNSQPVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELLGAVIMHYAGKWLPGLIKEGGVAIAPAMSSAIG 312
BLAST of FC876423 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.267e-26 Identity = 72/219 (32.88%), Postives = 116/219 (52.97%), Query Frame = 3 Query: 3 VKLELTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLRNWKDSLKALQTCDDILPYAEELNITKRCIESLAVKASTDPNLFGWPVVEHGGPMQSPGGSVLWNGISTGARPKNSTSDWWYEDVSTLSLPLYKRLIDVMESRGIRQEIIAGSLTFYAKKYLPGLNRRQGDSSTRLAPVALGAPPSEEEQKLLLEEIDKLLPVQKGLVSA*FLFG 659 + E+T+SNV L C +++LEMTEEY NL ++TE +L +V +N + ++ L+ + +LP A+ELNI RCI+++A KA + + +E+ S G + +S + DWW ED+S L + LY+R+++ M+ RG+R E I SL YA++ L E ++ ++E I LLPV+ +V FLFG Sbjct: 105 INFEITSSNVAQLFCVSDYLEMTEEYSKDNLASRTEEYLESIVCKNLEMCVQVLKQSEILLPLADELNIIGRCIDAIASKACAEQIASSFSRLEY-----SSSGRL---HMSRQVKSSGDGGDWWIEDLSVLRIDLYQRVMNAMKCRGVRPESIGASLVSYAEREL---------------------TKRSEHEQTIVETIVTLLPVENLVVPISFLFG 294
BLAST of FC876423 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21 Identity = 58/217 (26.73%), Postives = 100/217 (46.08%), Query Frame = 3 Query: 3 VKLELTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLRNWKDSLKALQTCDDILPYAEELNITKRCIESLAVKASTDPNLFGWPVVEHGGPMQSPGGSVLWNGISTGARPKNSTSDWWYEDVSTLSLPLYKRLIDVMESRGIRQEIIAGSLTFYAKKYLPGLNRRQGDSSTRLAPVALGAPPSEEEQKLLLEEIDKLLPVQKGLVSA*FL 653 V E+T NV L CAAE L+MT++Y D NL +T+ FL+QV L + ++ L++C+ +LP + +L I +RC++ + KA + P + +WW E++ L + + ++ M+ RG++ +A ++ Y +K L L R + + +Q+ L++ I LLP KGL FL Sbjct: 94 VNFEITVQNVAALHCAAEFLQMTDKYCDNNLAGRTQDFLSQVALSSLSGAIVVLKSCEILLPISRDLGIVRRCVDVVGAKACNEAMF-----------------------------PCRTPPNWWTEELCILDVDFFSDVVSSMKQRGVKPSSLASAIITYTEKSLRDLVRDHSGRGVKYSDPGDNESDERSQQRDLVQSIVSLLPSDKGLFPVNFL 281 The following BLAST results are available for this feature:
BLAST of FC876423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876423 ID=FC876423; Name=FC876423; organism=Citrus clementina; type=EST; length=659bpback to top |