FC876427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: TDT_ARATH (Tonoplast dicarboxylate transporter OS=Arabidopsis thaliana GN=TDT PE=2 SV=2) HSP 1 Score: 349.362 bits (895), Expect = 1.154e-95 Identity = 173/238 (72.69%), Postives = 197/238 (82.77%), Query Frame = 3 Query: 6 EPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNLPEVPLQSTLVR----KYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMXTLLFIIPSMKQKGEKLMDWNNAEATLEHILL 707 EP+N PLLLLGIC TTAFVSMWMHNVAAAV+MMPVATGILQ LP + +V K+ +AVVLGVIYSAAVGGMSTLTGTGVNLILVGMWK+YFPEA+PISFS WF FGFPLAL IFV LW +LC+ YC +G+G ALS YL K++L+RELD+LGPM FAEKMVLAVFG L+ LWMTR+ITDDIPGWG +F RAGDGT SV+M TLLFIIPS +KGEKLMDWN + +I+L Sbjct: 157 EPLNAPLLLLGICATTAFVSMWMHNVAAAVMMMPVATGILQRLPSSSSTTEVVHPAVGKFSRAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKSYFPEADPISFSQWFFFGFPLALCIFVVLWCVLCVMYCPKGAGQALSPYLHKSHLRRELDLLGPMNFAEKMVLAVFGGLVVLWMTRNITDDIPGWGRIFAGRAGDGTVSVMMATLLFIIPSNIKKGEKLMDWNKCKKLPWNIVL 394
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A5_HUMAN (Solute carrier family 13 member 5 OS=Homo sapiens GN=SLC13A5 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.043e-28 Identity = 85/258 (32.95%), Postives = 126/258 (48.84%), Query Frame = 3 Query: 18 PPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNLP-------------------EVPLQSTLV-------------RKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANP-ISFSTWFCFGFPLALVIFVALWAILCLFYC------SRGSGPALSEYLDKANLK---RELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALF-----NDRAGDGTASVVMXTLLFIIPSMKQK 650 P L+LG G TA +SMW+ N A +M+P+ ILQ + E+P + ++ CKA+ L + Y+A++GG +TLTGTG N++L+G FP++ ++F++WF F FP LV+ + W L Y S G G S+ +KA LK E LGP++FAE VL F +L+ LW +R +PGW + D T ++ + TLLFI+PS K K Sbjct: 121 PARLMLGFMGVTALLSMWISNTATTAMMVPIVEAILQQMEATSAATEAGLELVDKGKAKELPGSQVIFEGPTLGQQEDQERKRLCKAMTLCICYAASIGGTATLTGTGPNVVLLGQMNELFPDSKDLVNFASWFAFAFPNMLVMLLFAWLWLQFVYMRFNFKKSWGCG-LESKKNEKAALKVLQEEYRKLGPLSFAEINVLICFFLLVILWFSRD-PGFMPGWLTVAWVEGETKYVSDATVAIFVATLLFIVPSQKPK 376 HSP 2 Score: 20.7866 bits (42), Expect = 1.043e-28 Identity = 7/17 (41.18%), Postives = 9/17 (52.94%), Query Frame = 1 Query: 664 WIGTMQKLPWNIYCFRG 714 W T +K+PW I G Sbjct: 399 WKVTQEKVPWGIVLLLG 415
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A3_HUMAN (Solute carrier family 13 member 3 OS=Homo sapiens GN=SLC13A3 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.076e-28 Identity = 90/305 (29.51%), Postives = 133/305 (43.61%), Query Frame = 3 Query: 12 MNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL-----------------------------------------------PEVPL--------QSTLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFY---CSRGSGPALSEYLDKAN------LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMXTLLFIIPSMK-------------QKGEKLMDWNNAEATL 692 + P L+LG+ TT+F+SMW+ N A+ +M+P+A IL++L EVPL + R K ++ + YSA++GG +TLTGT NLIL+G K++FP+ + ++F +WF F FPL L+ +A W + Y RG SE A ++ E LGP+ FAE+ V +F M L TR IPGW +LFN D V + T+LF PS + + E L+ W A+ T+ Sbjct: 122 VQPARLILGMMVTTSFLSMWLSNTASTAMMLPIANAILKSLFGQKEVRKDPSQESEENTAAVRRNGLHTVPTEMQFLASTEAKDHPGETEVPLDLPADSRKEDEYRRNIWKGFLISIPYSASIGGTATLTGTAPNLILLGQLKSFFPQCDVVNFGSWFIFAFPLMLLFLLAGWLWISFLYGGLSFRGWRKNKSEIRTNAEDRARAVIREEYQNLGPIKFAEQAVFILFCMFAILLFTRD-PKFIPGWASLFNPGFLSDAVTGVAIVTILFFFPSQRPSLKWWFDFKAPNTETEPLLTWKKAQETV 425
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A2_MOUSE (Solute carrier family 13 member 2 OS=Mus musculus GN=Slc13a2 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.458e-27 Identity = 83/264 (31.44%), Postives = 128/264 (48.48%), Query Frame = 3 Query: 12 MNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL-------------PEVPLQSTLVRK---------------------------YCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPE-ANPISFSTWFCFGFPLALVIFVALWAILCLFYC------SRGSGPALSEYLDKA--NLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWG-ALFNDRAG-----DGTASVVMXTLLFIIPS 638 + P LLLLG TAF+SMW+ N A +M+P+ +L+ L P LQ +K + + + L + YSA++GG++TLTGT NL+L G + FPE +N ++F++WF F FP +++ + W L + + + G G E A +K + +LGPM+FAEK V +F +L+ LW TR PGWG F ++ G DGT ++ + ++FIIPS Sbjct: 119 VRPALLLLGFMLVTAFLSMWISNTATTAMMLPIGYAVLEQLQGSQKDVEEGNSNPSFELQEASPQKEETKLDNGQAVSVSSEPRAQKTKEHHRFSQGLSLCICYSASIGGIATLTGTTPNLVLQGQVNSIFPENSNVVNFASWFGFAFPTMVILLLLAWLWLQVLFLGVNFRKNFGFGEGEEERKQAAFQVIKTQHRLLGPMSFAEKAVTFLFVLLVVLWFTRE-PGFFPGWGDTAFANKKGQSMVSDGTVAIFISLIMFIIPS 381 HSP 2 Score: 20.4014 bits (41), Expect = 1.458e-27 Identity = 7/17 (41.18%), Postives = 8/17 (47.06%), Query Frame = 1 Query: 664 WIGTMQKLPWNIYCFRG 714 W K+PWNI G Sbjct: 405 WKTVNDKMPWNILILLG 421
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A2_RABIT (Solute carrier family 13 member 2 OS=Oryctolagus cuniculus GN=SLC13A2 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.757e-27 Identity = 83/272 (30.51%), Postives = 134/272 (49.26%), Query Frame = 3 Query: 12 MNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL-----------------------------------------PEVPLQS-----TLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPE-ANPISFSTWFCFGFPLALVIFVALWAILCLFYCS----RGSGPALSEYLDKAN------LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGAL-FNDRAG-----DGTASVVMXTLLFIIPS 638 + P LL+LG TAF+SMW+ N A+ +M+P+A +LQ L P VPL+S ++ + + L V YSA++GG++TLTGT NL+L G + FP+ N ++F++WF F FP+ +++ + W L + + + G E+ + ++ + +LGPM+FAEK V +F +L+ LW TR GWG L F+D +G DG+AS+++ LF++PS Sbjct: 119 VRPALLILGFMVVTAFLSMWISNTASTAMMVPIAHAVLQELNNTQSNVEEGSDNPTFELQEPSPQKETSKVDEKDNGQAQPLPAVPLESGEHMTQEQLRFSQGMSLCVCYSASIGGIATLTGTTPNLVLQGQMTSLFPQNPNVVNFASWFGFAFPIMVILLLLSWLWLQILFLGINFRKNFGIREQEHEQQRKQAAYRVIQTQYRLLGPMSFAEKAVFILFVILVLLWFTRE-PGFFHGWGNLVFSDASGRVMVSDGSASILIGVFLFMVPS 389
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A3_RAT (Solute carrier family 13 member 3 OS=Rattus norvegicus GN=Slc13a3 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27 Identity = 85/303 (28.05%), Postives = 132/303 (43.56%), Query Frame = 3 Query: 12 MNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQN-----------------------------------------------------LPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYCS---RGSGPALSEYLD------KANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMXTLLFIIPSMK-------------QKGEKLMDWNNAEATL 692 + P L+LG+ TT+F+SMW+ N A+ +M+P+A+ IL++ LP+ + R K ++ + YSA++GG +TLTGT NLIL+G K++FP+ + ++F +WF F FPL L+ + W + Y RG S+ D KA ++ E LGP+ FAE+ V +F + L +R IPGW +LF D V + T+LF PS K + E L+ W A+ T+ Sbjct: 122 VQPARLILGMMVTTSFLSMWLSNTASTAMMLPIASAILKSLFGQRDTRKDLPREGEDSTAAVRGNGLRTVPTEMQFLASSEGGHAEDVEAPLELPDDSKEEEHRRNIWKGFLISIPYSASIGGTATLTGTAPNLILLGQLKSFFPQCDVVNFGSWFIFAFPLMLLFLLVGWLWISFLYGGMSWRGWRKKNSKLQDVAEDKAKAVIQEEFQNLGPIKFAEQAVFILFCLFAILLFSRD-PKFIPGWASLFAPGFVSDAVTGVAIVTILFFFPSQKPSLKWWFDFKAPNSETEPLLSWKKAQETV 423
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A3_MOUSE (Solute carrier family 13 member 3 OS=Mus musculus GN=Slc13a3 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.537e-26 Identity = 83/303 (27.39%), Postives = 130/303 (42.90%), Query Frame = 3 Query: 12 MNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQN-----------------------------------------------------LPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFY---------CSRGSGPALSEYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMXTLLFIIPSMK-------------QKGEKLMDWNNAEATL 692 + P L+LG+ TT+F+SMW+ N A+ +M+P+A+ IL++ LP+ + R K ++ + YSA++GG +TLTGT NLIL+G K++FP+ + ++F +WF F FPL L+ + W + Y + A +E KA ++ E LGP+ FAE+ V +F L +R IPGW +LF D V + T+LF PS K + E L+ W A+ T+ Sbjct: 122 VQPARLILGMMVTTSFLSMWLSNTASTAMMLPIASAILKSLFGQREARKDLPREGDESTAAVQGNGLRTVPTEMQFLASSEGGHTEDAEAPMELPDDSKEEEHRRNIWKGFLISIPYSASIGGTATLTGTAPNLILLGQLKSFFPQCDVVNFGSWFIFAFPLMLLFLLVGWLWISFLYGGMSWRSWRKKKSKIRADAEDQAKAVIQEEFQNLGPIKFAEQAVFILFCTFAILLFSRD-PKFIPGWASLFAPGFVSDAVTGVAIVTILFFFPSQKPSLKWWFDFKAPNSETEPLLSWKKAQETV 423
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A5_RAT (Solute carrier family 13 member 5 OS=Rattus norvegicus GN=Slc13a5 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 9.907e-26 Identity = 80/263 (30.42%), Postives = 123/263 (46.77%), Query Frame = 3 Query: 18 PPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL---------------------------PEVPLQSTLVRKY--------CKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPI-SFSTWFCFGFPLALVIFVALWAILCLFY-----------CSRGSGPALSEYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALF-----NDRAGDGTASVVMXTLLFIIPSMKQK 650 P L+LG TAF+SMW+ N A +M+P+ +L+ + +V + V+K KA+ L V Y+A++GG +TLTGTG N++L+G + FP++ + +F++WF F P L++ V W L FY C R +E + L E LGP+++AE VL FG+LI LW +R +PGW ++ D T ++ + LLFI+PS K K Sbjct: 121 PSRLMLGFMFVTAFLSMWISNTATTAMMIPIVEAMLEQMVATNVAVDASQRTMELLDKNKASELPGSQVVFEDPSVQKQEDEETKNMYKAMNLCVCYAASIGGTATLTGTGPNVVLLGQMQELFPDSKDVMNFASWFAFALPNMLLMLVMAWLWLLCFYMRPNLKKTCICCGRKKKD--TEKIASKVLYEEYRKLGPLSYAECNVLFCFGLLIILWFSRD-PGFMPGWLSIAWIEGNTKHVTDATVAIFVAILLFIVPSQKPK 380 HSP 2 Score: 20.7866 bits (42), Expect = 9.907e-26 Identity = 7/17 (41.18%), Postives = 9/17 (52.94%), Query Frame = 1 Query: 664 WIGTMQKLPWNIYCFRG 714 W T +K+PW I G Sbjct: 403 WKVTQEKVPWGIVLLLG 419
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A2_HUMAN (Solute carrier family 13 member 2 OS=Homo sapiens GN=SLC13A2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.841e-25 Identity = 80/269 (29.74%), Postives = 123/269 (45.72%), Query Frame = 3 Query: 12 MNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL---------------PEVPLQSTLVRK------------------------------YCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPE-ANPISFSTWFCFGFPLALVIFVALWAILCLFYC------SRGSGPALSEYLDKAN--LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRA------GDGTASVVMXTLLFIIPS 638 + P L+LG TAF+SMW+ N A + +M+P+A +L L P LQ +K + + L V YSA++GG++TLTGT NL+L G + FP+ N ++F++WF F FP +++ + W L + + + G G + E A ++ E +LGPM FAEK + +F +L+ LW TR GWG L A DGT ++ + ++FIIPS Sbjct: 119 VRPAPLILGFMLVTAFLSMWISNTATSAMMVPIAHAVLDQLHSSQASSNVEEGSNNPTFELQEPSPQKEVTKLDNGQALPVTSASSEGRAHLSQKHLHLTQCMSLCVCYSASIGGIATLTGTAPNLVLQGQINSLFPQNGNVVNFASWFSFAFPTMVILLLLAWLWLQILFLGFNFRKNFGIGEKMQEQQQAAYCVIQTEHRLLGPMTFAEKAISILFVILVLLWFTRE-PGFFLGWGNLAFPNAKGESMVSDGTVAIFIGIIMFIIPS 386 HSP 2 Score: 22.3274 bits (46), Expect = 2.841e-25 Identity = 8/17 (47.06%), Postives = 9/17 (52.94%), Query Frame = 1 Query: 664 WIGTMQKLPWNIYCFRG 714 W QK+PWNI G Sbjct: 410 WKTVNQKMPWNIVLLLG 426
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A2_RAT (Solute carrier family 13 member 2 OS=Rattus norvegicus GN=Slc13a2 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 1.381e-24 Identity = 81/261 (31.03%), Postives = 123/261 (47.13%), Query Frame = 3 Query: 24 LLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL-------------PEVPLQSTLVRK---------------------------YCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPE-ANPISFSTWFCFGFPLALVIFVALWAILCLFYC------SRGSGPALSEYLDKA--NLKRELDMLGPMAFAEKMVLAV-FGMLIALWMTRSITDDIPGWG-ALFNDRAG-----DGTASVVMXTLLFIIPS 638 LLLLG TAF+SMW+ N A +M+P+ +L+ L P LQ +K + + + L + YSA++GG+ LTGT NL+L G + FP+ AN ++F++WF F FP +++ + W L + + + G G E A +K + +LGPM+FAEK V F +L+ LW TR PGWG +F + G DGT ++ + ++FIIPS Sbjct: 122 LLLLGFMLVTAFLSMWISNTATTAMMVPIGHAVLEQLQASKKDVEGGNNNPTFELQEECPQKEVTKLDNGQPVSAPSEPRTQKTQEHHRFSQGLSLCICYSASIGGIDNLTGTTPNLVLQGQVNSLFPQNANVVNFASWFGFAFPTMIILLLLAWLWLQVLFLGVNFRKNFGFGEGEEERKQAAFQVIKTQYRLLGPMSFAEKTCSTVLFVLLVVLWFTRE-PGFFPGWGDTVFANEKGQSMPSDGTVAIFISLVMFIIPS 381 HSP 2 Score: 20.4014 bits (41), Expect = 1.381e-24 Identity = 7/17 (41.18%), Postives = 8/17 (47.06%), Query Frame = 1 Query: 664 WIGTMQKLPWNIYCFRG 714 W K+PWNI G Sbjct: 405 WKTVNDKMPWNIVILLG 421 The following BLAST results are available for this feature:
BLAST of FC876427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876427 ID=FC876427; Name=FC876427; organism=Citrus clementina; type=EST; length=721bpback to top |