FC876454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_CUCSA (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 1.181e-72 Identity = 130/131 (99.24%), Postives = 131/131 (100.00%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 1 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_CITSI (50S ribosomal protein L2, chloroplastic OS=Citrus sinensis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 1.181e-72 Identity = 130/131 (99.24%), Postives = 131/131 (100.00%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 1 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2B_COFAR (50S ribosomal protein L2-B, chloroplastic OS=Coffea arabica GN=rpl2-B PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 4.489e-72 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSA 438 MAIHLYKTSTPSTRNG VDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRR EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGA+IGDTIVSGTEVPIKMGNALPLSA Sbjct: 1 MAIHLYKTSTPSTRNGTVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRTEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGALIGDTIVSGTEVPIKMGNALPLSA 132
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_VITVI (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera GN=rpl2-A PE=3 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 1.000e-71 Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 MAIHLYKTSTPSTRN AVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 1 MAIHLYKTSTPSTRNRAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2B_SOYBN (50S ribosomal protein L2-B, chloroplastic OS=Glycine max GN=rpl2-B PE=3 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.706e-71 Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 MAIHLYKTSTPSTRNGAVDSQVKSNPRN+LIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEK+IYGRIVTIEYDPNRNAYICLIHYGDGEK+YILHPRGAIIGDTIVSGTEVPIKMGNALPLS Sbjct: 1 MAIHLYKTSTPSTRNGAVDSQVKSNPRNHLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKNIYGRIVTIEYDPNRNAYICLIHYGDGEKKYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 131
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_GOSHI (50S ribosomal protein L2, chloroplastic OS=Gossypium hirsutum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 2.910e-71 Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 MAIHLYKTSTP TRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITA HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 1 MAIHLYKTSTPGTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2A_COFAR (50S ribosomal protein L2-A, chloroplastic OS=Coffea arabica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 2.910e-71 Identity = 127/131 (96.95%), Postives = 129/131 (98.47%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 MAIHLYKTSTPSTRNG VDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRR EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGA+IGDTIVSGTEVPIKMGNALPL+ Sbjct: 1 MAIHLYKTSTPSTRNGTVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRTEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGALIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2A_CHLSC (50S ribosomal protein L2-A, chloroplastic OS=Chloranthus spicatus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 2.910e-71 Identity = 129/132 (97.73%), Postives = 129/132 (97.73%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSA 438 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQH CGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPI MGNALPLSA Sbjct: 1 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNALPLSA 132
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_PANGI (50S ribosomal protein L2, chloroplastic OS=Panax ginseng GN=rpl2-A PE=3 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 3.800e-71 Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 MAIHLYKTSTPSTRN AVDSQVKSNPRNNLIYGQH CGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 1 MAIHLYKTSTPSTRNRAVDSQVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2A_SOYBN (50S ribosomal protein L2-A, chloroplastic OS=Glycine max GN=rpl2-A PE=3 SV=2) HSP 1 Score: 268.47 bits (685), Expect = 3.800e-71 Identity = 127/131 (96.95%), Postives = 131/131 (100.00%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 MAIHLYKTSTPSTRNGAVDSQVKSNPRN+LIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEK+IYGRIVTIEYDPNRNAYICLIHYGDGEK+YILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 1 MAIHLYKTSTPSTRNGAVDSQVKSNPRNHLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKNIYGRIVTIEYDPNRNAYICLIHYGDGEKKYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131 The following BLAST results are available for this feature:
BLAST of FC876454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876454 ID=FC876454; Name=FC876454; organism=Citrus clementina; type=EST; length=903bpback to top |