FC877928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877928 vs. ExPASy Swiss-Prot
Match: DTL_MOUSE (Denticleless protein homolog OS=Mus musculus GN=Dtl PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 2.687e-35 Identity = 91/279 (32.62%), Postives = 133/279 (47.67%), Query Frame = 1 Query: 136 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHQENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKA------------ASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQACPHAESS---SAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPI 927 G PP +FC HI AV++E+G+V L+++ + C +E W+AH NA+FDL W+ + ++TA+GDQT K WD + G GH S+KS+ + +G RDG+ IWD RC N + F + GAH + + S+ K + S+T VL+ +DE ++ +A AV+ I+K WD R Q P A S TR G SSL DS G L A+C D IY++N+ L P+ Sbjct: 47 GVPVPPFGCTFCTAPSMEHILAVANEEGFVRLYNTESQTSKKTCFKE---------WMAHWNAVFDLAWVPGELKLVTAAGDQTAKFWDVRAGELMGTCKGHQCSLKSVAFPKFQKAVFSTGGRDGNIMIWDTRC------NKKDGFYRQVNQISGAHNTADKQTPSKPKKKQNSKGLAPAVDSQQSVTVVLF-QDENTLVSAGAVDGIIKVWDLRKNYTAYRQE-PIASKSFLYPGTSTRKLGYSSLVLDSTGSTLFANCTDDNIYMFNMTGLKTSPV 308
BLAST of FC877928 vs. ExPASy Swiss-Prot
Match: DTL_CHICK (Denticleless protein homolog OS=Gallus gallus GN=DTL PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.741e-34 Identity = 93/279 (33.33%), Postives = 135/279 (48.39%), Query Frame = 1 Query: 136 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHQENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLL--------SQSKRVSRRKAASM-----SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQACPHAES--SSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPI 927 G PP SF H+ AV++E+G+V L+D+ +N K +W AH NA+FDL W+ + I+TASGDQT K+WD + G GH S+KS+ + +G RDG+ +WD RC N + F + GAH + + KR + R A + S+T VL L+DE ++ +A AV+ ++K WD R A Q ++S TR G SSL DS G L A+C D IY++N+ L P+ Sbjct: 43 GMPVPPFGCSFSAAPNFEHVLAVANEEGFVRLYDTEA---------QNTTKLISKEWQAHSNAVFDLAWVPGEHRIVTASGDQTAKVWDVRAGELLGICKGHQCSLKSVAFSRFEKAVFCTGGRDGNIMVWDTRC------NKKDGFYRQVNQISGAHNVVDRQTPSKLRKKRQNLRGLAPLVDFQQSVTVVL-LQDEHTLISAGAVDGVIKVWDLRKNYAAYRQDPVPSKSFFYPGTSTRKLGYSSLVLDSTGANLFANCTDDSIYMFNMTSLKTFPV 305
BLAST of FC877928 vs. ExPASy Swiss-Prot
Match: DTL_HUMAN (Denticleless protein homolog OS=Homo sapiens GN=DTL PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 5.067e-34 Identity = 88/279 (31.54%), Postives = 132/279 (47.31%), Query Frame = 1 Query: 136 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHQENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAA------------SMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQACPHAESS---SAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPI 927 G PP +F H+ AV++E+G+V L+++ ++ K +W+AH NA+FDL W+ + ++TA+GDQT K WD + + G GH S+KS+ + +G RDG+ +WD RC N + F + GAH S + S+ K S+T VL+ +DE ++ +A AV+ I+K WD R Q P A S TR G SSL DS G L A+C D IY++N+ L P+ Sbjct: 47 GVPVPPFGCTFSSAPNMEHVLAVANEEGFVRLYNTE---------SQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQTAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRC------NKKDGFYRQVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLF-QDENTLVSAGAVDGIIKVWDLRKNYTAYRQE-PIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNMTGLKTSPV 308
BLAST of FC877928 vs. ExPASy Swiss-Prot
Match: DTL_XENTR (Denticleless protein homolog OS=Xenopus tropicalis GN=dtl PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.380e-31 Identity = 91/297 (30.64%), Postives = 143/297 (48.15%), Query Frame = 1 Query: 85 DVVTDFTEIGAVAVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHQENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAH--LLSQS-KRVSRRKA----------ASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQACPHAE--SSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIT 930 D T + E+GA PP +F SH+ AV++E+G V L+D+ + + ++ + +++AH NA+FD+ W+ + ++TASGDQT K+WD + G GH S+KS+ + +G RDG+ +WD RC N + F + GAH L Q+ +V +RK + S+T V++ +DE +I +A AV+ IVK WD R + Q A+ TR G S+L D G L ASC D +Y++N L P++ Sbjct: 38 DEHTSYGELGAAV--------PPFGCAFSTVPDMSHVLAVANEEGIVRLYDTECR---------DVQRLVVKEFMAHTNAVFDIAWVPGEHKLVTASGDQTAKLWDVKAGDLIGECKGHQCSLKSVAFSKFEKAVFSTGGRDGNIMVWDTRC------NKKDGFYRQVNQITGAHNALDKQTPSKVKKRKPYVRGLAPSVDSQQSVTVVIF-QDEHTIISAGAVDGIVKVWDLRKNYSAYRQDPVPAKLFPYPGNSTRKLGYSNLVLDPTGTNLFASCTDDNVYMFNATGLKTEPVS 310
BLAST of FC877928 vs. ExPASy Swiss-Prot
Match: L2DTL_DROME (Protein lethal(2)denticleless OS=Drosophila melanogaster GN=l(2)dtl PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 7.333e-25 Identity = 77/275 (28.00%), Postives = 129/275 (46.91%), Query Frame = 1 Query: 142 ETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHQENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTG--ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCK-----SSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRK-----AASMSITSVLYLKDEVSIATASAVNSIVKFWDTR-NLKAQITQACPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPI 927 E P + F HI A+++EDG ++L D+ ++ E+ + H NA+FDL W ++ASGD T ++W+ G + +GHT S+KS T+ + +G RDG+ IWD+R +S NC ++S +SQ K+ +R S SIT + + +D ++ + A + ++K WD R N A + P + A + G ++L D++G L A+CMD+ IY YN+ + P+ Sbjct: 50 EPPIFSAKFANCDGYRHILAIANEDGKITLQDTTQR-------NHQPEEQSLVGPQCHFNAVFDLEWAPGQMRFVSASGDHTARLWEVAGSGIRGLNSYVGHTRSVKSAAFKRTDPAVFATGGRDGAILIWDIRANLNMDLTSRVDNC----IYSGHTGGPGTPVSQRKQRTRTPKMAGGTTSSSITGLAF-QDNDTLISCGAGDGVIKVWDLRRNYTAYKKEPLPRHKLPYAGSSTFRGFTNLIVDASGTRLYANCMDNTIYCYNLASYSQRPL 312
BLAST of FC877928 vs. ExPASy Swiss-Prot
Match: CDT2_SCHPO (Cell division cycle protein cdt2 OS=Schizosaccharomyces pombe GN=cdt2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.648e-18 Identity = 76/260 (29.23%), Postives = 120/260 (46.15%), Query Frame = 1 Query: 178 SKNSHIFAVSDEDGYVSLFDSRRKLPSFACHQENAEKAR-ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKC------TGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSR---RKAASMSITSVLYLKDEVS-IATASAVNSIVKFWDTRNL-KAQITQACPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKG 921 + N + AV E G + LFDSR ++EN AR I W+AH NAIF + + K+D+ + T+SGDQT K++D ++C G H+ S+K + + LVS SRDGS WD+R + G H R+ + SITS +L S + ++ + NS +K WD R + + A E +++K R G++++ +G + A+ D IY Y+ L+ G Sbjct: 136 ANNESLLAVCTETGALELFDSRFYDRQ---NEENQPSARRIHGWLAHNNAIFSVNFSKDDSLLATSSGDQTSKVFDLSTQQCITRLGRRGVDGYHSHSVKQVNFCNDSPYNLVSCSRDGSIIFWDMRT--------------HGITIDGEHFQKPVLRIRKAHENSGRDCSITSATWLPQSTSQVISSCSANSALKLWDLRTVHTVRPLPAATTPELTTSK--RDFGVTNVCTSPDGERIYAASRDSIIYEYSSRHLNSG 376
BLAST of FC877928 vs. ExPASy Swiss-Prot
Match: PFS2_EMENI (Polyadenylation factor subunit 2 OS=Emericella nidulans GN=pfs2 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11 Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 1 Query: 310 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLR 537 AH +A+ DL W DT L+AS D T+KI+D + C L GH +KS HPT +LVSGS+D WD R Sbjct: 153 AHHDAVRDLAWSPSDTKFLSASDDTTLKIYDFTARTCDTVLTGHNWDVKSCDWHPTKG-LLVSGSKDHQVKFWDPR 227 The following BLAST results are available for this feature:
BLAST of FC877928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877928 ID=FC877928; Name=FC877928; organism=Citrus clementina; type=EST; length=935bpback to top |