FC878135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878135 vs. ExPASy Swiss-Prot
Match: PGES2_DANRE (Prostaglandin E synthase 2 OS=Danio rerio GN=ptges2 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.463e-38 Identity = 85/196 (43.37%), Postives = 114/196 (58.16%), Query Frame = 1 Query: 292 VVLYQYEACPFCNKVKAFLDYYRIPYKVVEVNPISKKEIKWSDYKKVPILKVDGE-QMVDSSDIM--------------------------------------DKLFQRIH------LDNASSQSDEEKKWRAWVDNHLVHVLSPNIYRTTSEALESFDYISTQGNFSFTEKLVAKYVGAAAMYFVSKKLKKRHNI 744 + LYQY+ CPFC+KV+AFLDY+R+PY++VEVNP+ ++EIKWS Y+KVPIL V+G Q+ DSS I+ +K + +H L EE KWR W D+ LVH++SPN+YRT +EAL SFDYI +G F E AKY GAAAM+ +SK+LK +HN+ Sbjct: 107 LTLYQYKTCPFCSKVRAFLDYHRLPYEIVEVNPVMRQEIKWSTYRKVPILMVNGTVQLNDSSVIISALKTYISSKDKKISEILACYPEMKSKNDRGKDVIEFGNKYWVMVHDADADQLYPGKDSRKEEIKWRTWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGSFEGFFAKYFGAAAMWIISKRLKYKHNL 302
BLAST of FC878135 vs. ExPASy Swiss-Prot
Match: PGES2_MOUSE (Prostaglandin E synthase 2 OS=Mus musculus GN=Ptges2 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.239e-37 Identity = 89/217 (41.01%), Postives = 120/217 (55.30%), Query Frame = 1 Query: 244 AKPQAKEQPRSEKFGDVVLYQYEACPFCNKVKAFLDYYRIPYKVVEVNPISKKEIKWSDYKKVPILKVDG----EQMVDSSDIMDKLFQRI-----------------------------------HLDNASSQS--------DEEKKWRAWVDNHLVHVLSPNIYRTTSEALESFDYISTQGNFSFTEKLVAKYVGAAAMYFVSKKLKKRHNITDE 753 A+ A + P S + LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL +Q+ DSS I+ L + LD +Q EE KWR W D+ LVH++SPN+YRT +EAL SFDYI +G F E +AKYVGAAAMY +SK+LK RH++ D+ Sbjct: 86 AERSAAQLPLSNSL-QLTLYQYKTCPFCSKVRAFLDFHSLPYQVVEVNPVRRTEIKFSSYRKVPILVAQEGDSLQQLNDSSVIISALKTYLVSGQPLEEVITYYPPMKAMNDQGKEVTEFCNKYWPMLDEKEAQQMYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPAEALASFDYIVREGKFGAVEAAMAKYVGAAAMYLISKRLKSRHHLQDD 301
BLAST of FC878135 vs. ExPASy Swiss-Prot
Match: PGES2_MACFA (Prostaglandin E synthase 2 OS=Macaca fascicularis GN=PTGES2 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.789e-36 Identity = 83/202 (41.09%), Postives = 113/202 (55.94%), Query Frame = 1 Query: 292 VVLYQYEACPFCNKVKAFLDYYRIPYKVVEVNPISKKEIKWSDYKKVPILKVD----GEQMVDSSDIM---------------------------------------------DKLFQRIHLDNASSQSDEEKKWRAWVDNHLVHVLSPNIYRTTSEALESFDYISTQGNFSFTEKLVAKYVGAAAMYFVSKKLKKRHNITD 750 + LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL +Q+ DSS I+ +K Q+++ + EE KWR W D+ LVH++SPN+YRT +EAL SFDYI +G F E VAKY+GAAAMY +SK+LK RH + D Sbjct: 102 LTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVLRAEIKFSSYRKVPILVAQEGESSQQLNDSSVIISALKTYLVSGQPLEEIITYYPAMKAVNDQGKEVTEFGNKYWLMLNEKEAQQVY--SGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGAVEGAVAKYMGAAAMYLISKRLKSRHRLQD 301
BLAST of FC878135 vs. ExPASy Swiss-Prot
Match: PGES2_HUMAN (Prostaglandin E synthase 2 OS=Homo sapiens GN=PTGES2 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.789e-36 Identity = 84/200 (42.00%), Postives = 112/200 (56.00%), Query Frame = 1 Query: 292 VVLYQYEACPFCNKVKAFLDYYRIPYKVVEVNPISKKEIKWSDYKKVPILKVD----GEQMVDSSDIMDKLFQRI-----------------------------------HLDNASSQS--------DEEKKWRAWVDNHLVHVLSPNIYRTTSEALESFDYISTQGNFSFTEKLVAKYVGAAAMYFVSKKLKKRHNITD 750 + LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL +Q+ DSS I+ L + L+ +Q EE KWR W D+ LVH++SPN+YRT +EAL SFDYI +G F E VAKY+GAAAMY +SK+LK RH + D Sbjct: 102 LTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPILVAQEGESSQQLNDSSVIISALKTYLVSGQPLEEIITYYPAMKAVNEQGKEVTEFGNKYWLMLNEKEAQQVYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGAVEGAVAKYMGAAAMYLISKRLKSRHRLQD 301 The following BLAST results are available for this feature:
BLAST of FC878135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878135 ID=FC878135; Name=FC878135; organism=Citrus clementina; type=EST; length=766bpback to top |