FC878141
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878141 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.035e-20 Identity = 81/245 (33.06%), Postives = 118/245 (48.16%), Query Frame = -1 Query: 64 CAGSTCVYGIEYGDNSFSAGFFAKETLTLTSSDVFPNFLFGCGQYNRXXXXXXXXXXXXXQ-DSISLVSQTSRKYKKYFSYCLPXXXXST-GHLTFGKAAGNGPSKTIKFTPLSTATADSSFYGLDIIGLSVGGKKLPIPISVFS-----SAGAIIDSGTVITRLPPAAYSALRSTFKKFMSKYPTAPALSILDTCYDF-SNYTSISVPVISFFFNRGVEVSIEGSAILIGSSPKQICLAFAGNS 774 C + C Y YGD S + G+ A ET T +S V PN FGCG+ N+ +SL SQ FSYC+ S+ L G AA P + T L ++ + ++Y + + G++VGG L IP S F + G IIDSGT +T LP AY+A+ F ++ + S L TC+ S+ +++ VP IS F+ GV +++ ILI + ICLA +S Sbjct: 164 CNNNECQYTYGYGDGSTTQGYMATETFTFETSSV-PNIAFGCGEDNQGFGQGNGAGLIGMGWGPLSLPSQLG---VGQFSYCMTSYGSSSPSTLALGSAASGVPEGSPS-TTLIHSSLNPTYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLSTCFQQPSDGSTVQVPEISMQFDGGV-LNLGEQNILISPAEGVICLAMGSSS 402 HSP 2 Score: 20.4014 bits (41), Expect = 1.035e-20 Identity = 6/14 (42.86%), Postives = 11/14 (78.57%), Query Frame = -3 Query: 2 VIGNVQQKTLEVVY 43 + GN+QQ+ +V+Y Sbjct: 408 IFGNIQQQETQVLY 421
BLAST of FC878141 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.625e-17 Identity = 74/254 (29.13%), Postives = 113/254 (44.49%), Query Frame = -1 Query: 49 TPQCAGSTCVYGIEYGDNSFSAGFFAKETLTLTSSDVFPNFLFGCGQYNR-XXXXXXXXXXXXXQDSISLVSQTSRKYKKYFSYCL-PXXXXSTGHLTFGKAAGNGPSKTIKFTPLSTATADSSFYGLDIIGLSVGGKKLPIPISVFS------SAGAIIDSGTVITRLPPAAYSALRSTFKKFMSKYPTAPALSILDTCYDF-SNYTSISVPVISFFFNRGVEVSIEGSAILIGSSPKQICLAFAGNSDDSDV 783 +P C+ + C Y YGD S + G ETLT S + PN FGCG+ N+ + +SL SQ FSYC+ P + +L G A N + T L ++ +FY + + GLSVG +LPI S F+ + G IIDSGT +T AY ++R F ++ + S D C+ S+ +++ +P F+ G ++ + I S ICLA +S + Sbjct: 160 SPTCSNNFCQYTYGYGDGSETQGSMGTETLTFGSVSI-PNITFGCGENNQGFGQGNGAGLVGMGRGPLSLPSQLD---VTKFSYCMTPIGSSTPSNLLLGSLA-NSVTAGSPNTTLIQSSQIPTFYYITLNGLSVGSTRLPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQINLPVVNGSSSGFDLCFQTPSDPSNLQIPTFVMHFDGG-DLELPSENYFISPSNGLICLAMGSSSQGMSI 407 HSP 2 Score: 21.1718 bits (43), Expect = 4.625e-17 Identity = 7/14 (50.00%), Postives = 11/14 (78.57%), Query Frame = -3 Query: 2 VIGNVQQKTLEVVY 43 + GN+QQ+ + VVY Sbjct: 407 IFGNIQQQNMLVVY 420 The following BLAST results are available for this feature:
BLAST of FC878141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878141 ID=FC878141; Name=FC878141; organism=Citrus clementina; type=EST; length=846bpback to top |