FC878146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878146 vs. ExPASy Swiss-Prot
Match: TOCC_ARATH (Tocopherol cyclase, chloroplastic OS=Arabidopsis thaliana GN=VTE1 PE=1 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 1.188e-90 Identity = 149/193 (77.20%), Postives = 170/193 (88.08%), Query Frame = 3 Query: 18 YHFDGSTRRFFEGWYFRVSIPERKQSFCIIYSVENPAFKKKLSSLEVAQHGPRFTGVGVQILGADDKYMCHYSEESSNFWGSRHELMLGNTFRADKGSQPPTKEVPPQEFNRRVLEGFQVTPLWHQGCIHDDGRTNFAETVKSARWEYSTRPVYGWGNVGSKQNSTAGWLAAFPVFEPHWQICMAGGLSTGII 596 YHFDG+ R+FFEGWYFRVSIPE+++SFC +YSVENPAF++ LS LEVA +GPRFTGVG QILGA+DKY+C Y ++S NFWG RHEL+LGNTF A G++ P KEVPP+EFNRRV EGFQ TP WHQG I DDGRT++AETVKSARWEYSTRPVYGWG+VG+KQ STAGW AAFPVFEPHWQICMAGGLSTG I Sbjct: 82 YHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYGPRFTGVGAQILGANDKYLCQYEQDSHNFWGDRHELVLGNTFSAVPGAKAPNKEVPPEEFNRRVSEGFQATPFWHQGHICDDGRTDYAETVKSARWEYSTRPVYGWGDVGAKQKSTAGWPAAFPVFEPHWQICMAGGLSTGWI 274
BLAST of FC878146 vs. ExPASy Swiss-Prot
Match: TOCC_MAIZE (Probable tocopherol cyclase, chloroplastic OS=Zea mays GN=SDX1 PE=2 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 3.703e-84 Identity = 141/193 (73.06%), Postives = 163/193 (84.46%), Query Frame = 3 Query: 18 YHFDGSTRRFFEGWYFRVSIPERKQSFCIIYSVENPAFKKKLSSLEVAQHGPRFTGVGVQILGADDKYMCHYSEESSNFWGSRHELMLGNTFRADKGSQPPTKEVPPQEFNRRVLEGFQVTPLWHQGCIHDDGRTNFAETVKSARWEYSTRPVYGWGNVGSKQNSTAGWLAAFPVFEPHWQICMAGGLSTGII 596 YHFDG+ R FFEGWYF+VSIPE +QSFC +YSVENP F+ +S L+ + PRFTGVG QILGADDKY+C +SE+S+NFWGSRHELMLGNTF ++K S PP EVPPQ+F+RRVLEG QVTP+WHQG I DDGR+N+ V++ARWEYSTRPVYGWG+V SKQ STAGWLAAFP FEPHWQICMA GLSTG I Sbjct: 71 YHFDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDKLLYRPRFTGVGAQILGADDKYICQFSEKSNNFWGSRHELMLGNTFISNKESTPPQGEVPPQDFSRRVLEGLQVTPIWHQGFIRDDGRSNYVPNVQTARWEYSTRPVYGWGDVKSKQLSTAGWLAAFPFFEPHWQICMARGLSTGWI 263 The following BLAST results are available for this feature:
BLAST of FC878146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878146 ID=FC878146; Name=FC878146; organism=Citrus clementina; type=EST; length=876bpback to top |