FC917841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917841 vs. ExPASy Swiss-Prot
Match: HEXB2_DICDI (Beta-hexosaminidase subunit B2 OS=Dictyostelium discoideum GN=hexb2 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.365e-33 Identity = 76/204 (37.25%), Postives = 115/204 (56.37%), Query Frame = 1 Query: 298 IWPLPAQFTSGNDTLSVDPALYLXXXXXXXXXXXXXEAFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLV--AKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPL 903 IWP+P + +G+ T+ + P + +A +RY +IF + + + S+ N +KI+V S++E LQ+G DESY + + + ++G II E TVYGA+RGLET Q+ FDY + + PW IQD PR+ RG+++DTSRH+ VDV+K+ IE+++Y K NV H H +D QSFPL Sbjct: 59 IWPMPKKVLNGDITVYISP--HFQFTTNLTKSTTLKKAMDRYYKLIFTEDSKSHSGISILNE-------------IKILVKSEDETLQIGFDESYEIYIDDSGDDGGKIIAE------TVYGAIRGLETLYQMIGFDYQREYYQIKHCPWIIQDSPRYPHRGVMLDTSRHFYSVDVLKEFIEALAYNKFNVFHWHAVDSQSFPL 241
BLAST of FC917841 vs. ExPASy Swiss-Prot
Match: HEXB1_DICDI (Beta-hexosaminidase subunit B1 OS=Dictyostelium discoideum GN=hexb1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.979e-28 Identity = 78/203 (38.42%), Postives = 105/203 (51.72%), Query Frame = 1 Query: 298 IWPLPAQFTSGNDTLSVDPALYLXXXXXXXXXXXXXEAFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKA-PWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPL 903 IWP P GN+++ + + +Y +IF + +NS S N K L I + S NE L+ G DESY L++ NE + +E NTVYG +RGLETF QL +++ S + P I DKPRF RG+++DTSRH+ VD I ++IES+SY K N LH HIID QSFPL Sbjct: 48 IWPAPFYGQFGNNSILISKEFNFTIISDSTLLLN--KTLSKYYNLIFTQD-NLINSSS--NTLNK----------LNINLKSKNEILKFGFDESYKLIIKNNEN------SKLEGNTVYGIMRGLETFYQLIKYNFSDNSYFIENCLPLIINDKPRFPHRGVMLDTSRHFYSVDTILKVIESLSYNKFNTLHWHIIDSQSFPL 229
BLAST of FC917841 vs. ExPASy Swiss-Prot
Match: HEXA2_DICDI (Beta-hexosaminidase subunit A2 OS=Dictyostelium discoideum GN=hexa2 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.951e-23 Identity = 63/165 (38.18%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 409 AFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPL 903 + RY+++ F V NN K S + L +++ SD+E L+LG+DESY LLV ++ I+ANT+YGA+RGLETF Q+ +D S + A + D P + +RGLL+D +RH+LP +++ II+SM Y K N +H H+ID +FP+ Sbjct: 66 SISRYQSLFFPF---------VSNNVLKDSSSNIE---LSLIIASDDETLELGIDESYFLLVNQDT-------YQIKANTIYGAMRGLETFKQMVVYDVVENSYSLTCAE--VVDYPTYQWRGLLVDNARHFLPKNMVLHIIDSMGYNKFNTMHWHLIDTVAFPV 209
BLAST of FC917841 vs. ExPASy Swiss-Prot
Match: HEXA1_DICDI (Beta-hexosaminidase subunit A1 OS=Dictyostelium discoideum GN=hexa1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22 Identity = 49/127 (38.58%), Postives = 82/127 (64.57%), Query Frame = 1 Query: 523 LKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPL 903 L + ++SD+E LQLG+DESY+L + + G ++A +YGA+RGLETF QL ++ S + I D PR+ +RG ++D++RHY+P ++I +I+S+ ++K N LH H++D +FP+ Sbjct: 84 LSVTIYSDDETLQLGIDESYSLSIEQ-------GSYQLKATNIYGAMRGLETFKQLIVYNELENSYSIVCVS--ISDSPRYPWRGFMVDSARHYIPKNMILHMIDSLGFSKFNTLHWHMVDAVAFPV 201
BLAST of FC917841 vs. ExPASy Swiss-Prot
Match: HEXB_HUMAN (Beta-hexosaminidase subunit beta OS=Homo sapiens GN=HEXB PE=1 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 1.619e-21 Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 571 DESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFD-YDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFP 900 DESYTLLV + A ++AN V+GALRGLETFSQL D Y T ++ I D PRF+ RG+LIDTSRHYLPV +I + +++M++ K NVLH HI+D+QSFP Sbjct: 146 DESYTLLVKEPV-------AVLKANRVWGALRGLETFSQLVYQDSYGTFTINEST----IIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFP 245
BLAST of FC917841 vs. ExPASy Swiss-Prot
Match: HEXB_RAT (Beta-hexosaminidase subunit beta OS=Rattus norvegicus GN=Hexb PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.371e-20 Identity = 58/111 (52.25%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 571 DESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFD-YDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFP 900 DESY+LLV + L ++AN V+GALRGLETFSQL D Y T ++ I D PRF RG+LIDTSRHYLPV I + +++M++ K NVLH HI+D+QSFP Sbjct: 124 DESYSLLVQEPVAL-------LKANEVWGALRGLETFSQLVYQDAYGTFTINEST----IADSPRFPHRGILIDTSRHYLPVKTIFKTLDAMAFNKFNVLHWHIVDDQSFP 223
BLAST of FC917841 vs. ExPASy Swiss-Prot
Match: HEXB_MOUSE (Beta-hexosaminidase subunit beta OS=Mus musculus GN=Hexb PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 3.053e-20 Identity = 58/127 (45.67%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 523 LKIVVHSDNEDL-QLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFP 900 + I + S+ E L DE+Y+LLV + A ++AN+V+GALRGLETFSQL D + + I D PRF RG+LIDTSRH+LPV I + +++M++ K NVLH HI+D+QSFP Sbjct: 108 VSITLESECESFPSLSSDETYSLLVQEPV-------AVLKANSVWGALRGLETFSQLVYQDSFGTFTINESS---IADSPRFPHRGILIDTSRHFLPVKTILKTLDAMAFNKFNVLHWHIVDDQSFP 224
BLAST of FC917841 vs. ExPASy Swiss-Prot
Match: HEXB_FELCA (Beta-hexosaminidase subunit beta OS=Felis catus GN=HEXB PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.988e-20 Identity = 73/173 (42.20%), Postives = 97/173 (56.07%), Query Frame = 1 Query: 406 EAFERYKAIIFEHEVEGVNSHSVFNNFRKRR----SWGFDIGTLKIVVHSDNE-DL--QLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFD-YDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFP 900 EAF RY IF + R+RR + ++ L + V D+E DL + DESYTLLV + A ++AN V+G LRGLETFSQL D Y T +V I D PRF RG+LIDT+RH+LPV I + +++M++ K NVLH HI+D+QSFP Sbjct: 70 EAFRRYHEYIFGFDK------------RQRRPAKPNSAIELQQLLVTVVLDSECDLFPNITSDESYTLLVKEPV-------AFLKANRVWGVLRGLETFSQLIYQDSYGTFTVNESD----IIDSPRFPHRGILIDTARHFLPVKSILKTLDAMAFNKFNVLHWHIVDDQSFP 219
BLAST of FC917841 vs. ExPASy Swiss-Prot
Match: HEXA_RAT (Beta-hexosaminidase subunit alpha OS=Rattus norvegicus GN=Hexa PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.988e-20 Identity = 62/165 (37.58%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 406 EAFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFP 900 EAF RY++++F G S + +K++ G +I + +V NE L E+YTL + ++ L + + TV+GALRGLETFSQL + + + I D PRF RG+L+DTSRHYLP+ I ++ M+Y K NV H H++D+ SFP Sbjct: 63 EAFRRYRSLLF-----GSGSWPRPSFSKKQQPLGKNILMVSVVTAECNEFPNLESVENYTLTINDDQCL-------LSSETVWGALRGLETFSQLV---WKSAEGTFFINKTKITDFPRFPHRGILLDTSRHYLPLSSILNTLDVMAYNKFNVFHWHLVDDSSFP 212
BLAST of FC917841 vs. ExPASy Swiss-Prot
Match: HEXA_MOUSE (Beta-hexosaminidase subunit alpha OS=Mus musculus GN=Hexa PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.988e-20 Identity = 63/165 (38.18%), Postives = 93/165 (56.36%), Query Frame = 1 Query: 406 EAFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFP 900 EAF RY+ ++F G F+N K+++ G +I + +V NE L E+YTL + ++ L + + TV+GALRGLETFSQL + + + I+D PRF RG+L+DTSRHYLP+ I ++ M+Y K NV H H++D+ SFP Sbjct: 63 EAFRRYRNLLFG---SGSWPRPSFSN--KQQTLGKNILVVSVVTAECNEFPNLESVENYTLTINDDQCL-------LASETVWGALRGLETFSQLV---WKSAEGTFFINKTKIKDFPRFPHRGVLLDTSRHYLPLSSILDTLDVMAYNKFNVFHWHLVDDSSFP 212 The following BLAST results are available for this feature:
BLAST of FC917841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >FC917841 ID=FC917841; Name=FC917841; organism=Citrus clementina; type=EST; length=904bpback to top |