FC918010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918010 vs. ExPASy Swiss-Prot
Match: HGL2_ARATH (Homeobox-leucine zipper protein GLABRA 2 OS=Arabidopsis thaliana GN=GL2 PE=2 SV=3) HSP 1 Score: 228.794 bits (582), Expect = 2.934e-59 Identity = 137/262 (52.29%), Postives = 161/262 (61.45%), Query Frame = 1 Query: 37 VDMSNNPPTSRTKDFFASPALSLSLAGIFRGAGASAAANNXXXXXXXXXXXXXXXXXXXXTTVEISSENSGHTRSRSDADFXXXXXXXXXXXXXXXXXXSXXXXXXXXX-YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSEIEKLREENKAMREAINKA--CCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLRAAVGKCPPGATSTSSCSAGNDQKKQNL 813 VDMS+ PT KDFF+SPALSLSLAGIFR A + + TVE+SSENSG TRSRS+ D + YHRHT +QIR MEALFKE+PHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK IQERHENSLLK+E+EKLREENKAMRE+ +KA CPNCG L +EN++LKAE++KLRAA+G+ P +SCS + + +L Sbjct: 5 VDMSSKQPT---KDFFSSPALSLSLAGIFRNASSGST-------NPEEDFLGRRVVDDEDRTVEMSSENSGPTRSRSEEDLEGEDHDDEEEEEEDGAAGNKGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGG-----------PDDLHLENSKLKAELDKLRAALGRTP--YPLQASCSDDQEHRLGSL 243
BLAST of FC918010 vs. ExPASy Swiss-Prot
Match: ROC9_ORYSJ (Homeobox-leucine zipper protein ROC9 OS=Oryza sativa subsp. japonica GN=ROC9 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.941e-51 Identity = 119/232 (51.29%), Postives = 141/232 (60.78%), Query Frame = 1 Query: 43 MSNNPPTSRTKDFFASPALSLSLAGIFRGAGASAAANNXXXXXXXXXXXXXXXXXXXXTTVEISSENSGHTRSRSDADFXXXXXXXXXXXXXXXXXXSXXXXXXXXXYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSEIEKLREENKAMREAINK-ACCPNCGMATTSRD-----TSMTTEEQQLRIENARLKAEV 720 M N P RTKDFFA+PALSL+LAG+F AA+ VEISSEN+G +S + YHRHTAEQIR MEALFKESPHPDE+QRQQ+SKQLGL+ RQVKFWFQNRRTQIK +QERHENSLLKSE+EKL++E++AMRE K + C NCG+ TS D T+ T EQ+LR+E A+LKAEV Sbjct: 1 MGTNRPRPRTKDFFAAPALSLTLAGVFGRKNGPAASGGDGVEEGDEEVQAAGE-----AAVEISSENAGPGCRQSQSG----GGSGEDGGHDDDDGEGSNKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQRQQVSKQLGLSARQVKFWFQNRRTQIKAVQERHENSLLKSELEKLQDEHRAMRELAKKPSRCLNCGVVATSSDAAAAATAADTREQRLRLEKAKLKAEV 223
BLAST of FC918010 vs. ExPASy Swiss-Prot
Match: ROC4_ORYSJ (Homeobox-leucine zipper protein ROC4 OS=Oryza sativa subsp. japonica GN=ROC4 PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 6.361e-38 Identity = 92/223 (41.26%), Postives = 115/223 (51.57%), Query Frame = 1 Query: 79 FFASPALSLSLAGIFRGAGASAAANNXXXXXXXXXXXXXXXXXXXXTTVEISSENSGHTRSRSDADFXXXXXXXXXXXXXXXXXXSXXXXXXXXXYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLRAAVGK 747 F +SPALSL+LA G + +E+ +E S D YHRHT +QI+E+EA+FKE PHPDEKQR +LSK+LGL PRQVKFWFQNRRTQ+K ERHENSLLK E +KLR EN ++REA + A C CG + S+ EE LR+ENARLK E+ ++ A K Sbjct: 13 FTSSPALSLALADAVAGRNSGGGGKMVTAAHGGVGGGGGGGRAKARDALEVENEMSRSGSDHLDVVSCGDAGGGGGDDDDDEDAEHGNPPKRKKRYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKMQLERHENSLLKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSL--EEHHLRVENARLKDELSRVCALAAK 233
BLAST of FC918010 vs. ExPASy Swiss-Prot
Match: ROC3_ORYSJ (Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. japonica GN=ROC3 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.361e-38 Identity = 81/146 (55.48%), Postives = 103/146 (70.55%), Query Frame = 1 Query: 364 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLRAAV-------GKCPPGATSTSSC 780 YHRHTA QI++MEALFKE PHPD+KQR +LS++LGL PRQVKFWFQNRRTQ+K Q+R +N +L++E E L+ +N ++ AI CPNCG A D M+ EEQQLRIENARLK E+++L G+ P +TS SC Sbjct: 138 YHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLAD--MSYEEQQLRIENARLKDELDRLACIATRYGGGGGRQPVLSTSALSC 281
BLAST of FC918010 vs. ExPASy Swiss-Prot
Match: ROC3_ORYSI (Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. indica GN=ROC3 PE=3 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 6.361e-38 Identity = 81/146 (55.48%), Postives = 103/146 (70.55%), Query Frame = 1 Query: 364 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLRAAV-------GKCPPGATSTSSC 780 YHRHTA QI++MEALFKE PHPD+KQR +LS++LGL PRQVKFWFQNRRTQ+K Q+R +N +L++E E L+ +N ++ AI CPNCG A D M+ EEQQLRIENARLK E+++L G+ P +TS SC Sbjct: 138 YHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLAD--MSYEEQQLRIENARLKDELDRLACIATRYGGGGGRQPVLSTSALSC 281
BLAST of FC918010 vs. ExPASy Swiss-Prot
Match: HDG11_ARATH (Homeobox-leucine zipper protein HDG11 OS=Arabidopsis thaliana GN=HDG11 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.361e-38 Identity = 76/128 (59.38%), Postives = 96/128 (75.00%), Query Frame = 1 Query: 364 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLRAAVGK 747 YHRHTA+QI+ +E+ FKE PHPDEKQR QLS++LGLAPRQ+KFWFQNRRTQ+K ER +NS LK+E +K+R EN A+REA+ A CPNCG S D +EQ+LRIENA L+ E+E++ K Sbjct: 36 YHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQLKAQHERADNSALKAENDKIRCENIAIREALKHAICPNCGGPPVSEDPYF--DEQKLRIENAHLREELERMSTIASK 161
BLAST of FC918010 vs. ExPASy Swiss-Prot
Match: ROC6_ORYSJ (Homeobox-leucine zipper protein ROC6 OS=Oryza sativa subsp. japonica GN=ROC6 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 2.417e-37 Identity = 82/150 (54.67%), Postives = 103/150 (68.67%), Query Frame = 1 Query: 364 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQ-ERHENSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLRAAVGK---------CPPGATSTSSCS 783 YHRHT +QI+E+EA+FKE PHPDEKQR +LS++L L RQVKFWFQNRRTQ+K Q ERHEN+LL+ E +KLR EN +REA+ C +CG A + S+ EEQ LRIENARLK E++++ A GK PG S +CS Sbjct: 126 YHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMKQTQIERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAVLGEVSL--EEQHLRIENARLKDELDRVCALAGKFLGRPISSISSPGPPSLQACS 273
BLAST of FC918010 vs. ExPASy Swiss-Prot
Match: ROC2_ORYSJ (Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp. japonica GN=ROC2 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.417e-37 Identity = 74/128 (57.81%), Postives = 95/128 (74.22%), Query Frame = 1 Query: 364 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLRAAVGK 747 YHRHT QI+EMEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K ERHENS L+S+ EKLR EN +EA++ A CPNCG + M+ +E LRIENARL+ E++++ A K Sbjct: 108 YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRAENMRYKEALSSASCPNCGGPAALGE--MSFDEHHLRIENARLREEIDRISAIAAK 233
BLAST of FC918010 vs. ExPASy Swiss-Prot
Match: HDG2_ARATH (Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana GN=HDG2 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.123e-37 Identity = 75/128 (58.59%), Postives = 95/128 (74.22%), Query Frame = 1 Query: 364 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLRAAVGK 747 YHRHT QI+EMEA FKE PHPD+KQR+QLS++L L P QVKFWFQN+RTQ+K ERHENS L++E EKLR +N REA+ A CPNCG T + M+ +E QLR+ENARL+ E++++ A K Sbjct: 68 YHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQNKRTQMKNHHERHENSHLRAENEKLRNDNLRYREALANASCPNCGGPTAIGE--MSFDEHQLRLENARLREEIDRISAIAAK 193
BLAST of FC918010 vs. ExPASy Swiss-Prot
Match: ROC7_ORYSJ (Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp. japonica GN=ROC7 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.200e-36 Identity = 72/128 (56.25%), Postives = 95/128 (74.22%), Query Frame = 1 Query: 364 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLRAAVGK 747 YHRHT QI+E+EA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+KT ERHEN+ L++E EKLR EN +EA+ A CPNCG + M+ +E LR+ENARL+ E++++ A K Sbjct: 92 YHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEKLRAENMRYKEALANASCPNCGGPAAIGE--MSFDEHHLRLENARLRDEIDRISAIAAK 217 The following BLAST results are available for this feature:
BLAST of FC918010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918010 ID=FC918010; Name=FC918010; organism=Citrus clementina; type=EST; length=833bpback to top |