FC918257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918257 vs. ExPASy Swiss-Prot
Match: U49A7_ARATH (UPF0497 membrane protein At5g40300 OS=Arabidopsis thaliana GN=At5g40300 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.094e-27 Identity = 62/124 (50.00%), Postives = 84/124 (67.74%), Query Frame = 3 Query: 585 IGSARKILRTNLTILKRAKRDNT----IKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLAYRLTAGHRKPRQILRYYLDFSLEQILTYLLLSA 944 + +R+ LR + + R++ I+K+LLGFRV FV LV+FSV+ +D+D+GWA DSFY YKEF +CLA NVI FVYSGF DL Y L+ R+ R LR++L+F L+Q+L YLL SA Sbjct: 92 VSESRRQLRPSFSSSSSTPRESKWASLIRKALLGFRVIAFVSCLVSFSVMVSDRDKGWAHDSFYNYKEFRFCLAANVIGFVYSGFMICDLVYLLSTSIRRSRHNLRHFLEFGLDQMLAYLLASA 215
BLAST of FC918257 vs. ExPASy Swiss-Prot
Match: U497A_ARATH (UPF0497 membrane protein At2g36330 OS=Arabidopsis thaliana GN=At2g36330 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.830e-24 Identity = 53/107 (49.53%), Postives = 76/107 (71.03%), Query Frame = 3 Query: 624 ILKRAKRDNTIKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLAYRLTAGHRKPRQILRYYLDFSLEQILTYLLLSA 944 IL+R++R+ +K S LGFR+ V +L++FS++AADK +GW+ DSF RYKE+ +CL+VNV+ FVYS FQ+ DLAY L LR +F ++Q+L YLL+SA Sbjct: 122 ILRRSRREEVVKFSALGFRLSEVVLALISFSIMAADKTKGWSGDSFDRYKEYRFCLSVNVVAFVYSSFQACDLAYHLVKEKHLISHHLRPLFEFIIDQVLAYLLMSA 228
BLAST of FC918257 vs. ExPASy Swiss-Prot
Match: U49D7_ARATH (UPF0497 membrane protein At5g62820 OS=Arabidopsis thaliana GN=At5g62820 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.580e-19 Identity = 51/144 (35.42%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 513 KQPPPVKPHISSAAAPDTESAPSNIGSARKILRTNLTILKRAKRDNTIKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLAYRLTAGHRKPRQILRYYLDFSLEQILTYLLLSA 944 K P + H S ++ G+ + T + RA+ D+ + + LGFR+ + +++FS++AADK +GW+ DS+ RYKE+ YCLAVNVI FVYS F++ D A + FS++Q+L YLL+SA Sbjct: 99 KSPSSMVVHNSWVREDGGQTTTRKAGAPINGEESTRTTVNRARGDDLVSLTALGFRITEVILCVISFSIMAADKTQGWSGDSYDRYKEYRYCLAVNVIAFVYSAFEACDAACYIAKESYMINCGFHDLFVFSMDQLLAYLLMSA 242
BLAST of FC918257 vs. ExPASy Swiss-Prot
Match: U497G_MAIZE (UPF0497 membrane protein 16 OS=Zea mays PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.836e-16 Identity = 53/142 (37.32%), Postives = 75/142 (52.82%), Query Frame = 3 Query: 519 PPPVKPHISSAAAPDTESAPSNIGSARKILRTNLTILKRAKRDNTIKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLAYRLTAGHRKPRQILRYYLDFSLEQILTYLLLSA 944 PPP P S A AP + + SA +++ IL R +R ++++ L R L A +VLAAD RGWARDS+ Y +F Y AVNV+ F+YS FQ LA + R DF+++Q+L YLL+S+ Sbjct: 114 PPPPPPAASPAPAPRAPPPHAQVRSADRVVPA---ILSRKRRAAVMQRAALLARAAAAGXXLAALTVLAADTRRGWARDSYSNYAQFRYSEAVNVVGFLYSVFQFVALAELMRRNTHLIPHPKRGLFDFTMDQVLAYLLISS 252
BLAST of FC918257 vs. ExPASy Swiss-Prot
Match: U497F_MAIZE (UPF0497 membrane protein 15 OS=Zea mays PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.349e-15 Identity = 50/141 (35.46%), Postives = 74/141 (52.48%), Query Frame = 3 Query: 522 PPVKPHISSAAAPDTESAPSNIGSARKILRTNLTILKRAKRDNTIKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLAYRLTAGHRKPRQILRYYLDFSLEQILTYLLLSA 944 PP P S A AP + + SA +++ IL R +R ++++ L R L A +VLA+D RGWARDS+ Y +F Y AVNV+ F+YS FQ LA + R DF+++Q++ YLL+S+ Sbjct: 111 PPPPPAASPAPAPRAPPPHAQVRSADRVVPA---ILSRKRRAAVMQRAALLARAAAAGLCLAALAVLASDTRRGWARDSYSNYAQFRYSEAVNVVGFLYSVFQFVALAELMRRNKHLIPHPKRDLFDFTMDQVVAYLLISS 248
BLAST of FC918257 vs. ExPASy Swiss-Prot
Match: U4975_SORBI (UPF0497 membrane protein Sb04g002820 OS=Sorghum bicolor GN=Sb04g002820 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.317e-13 Identity = 55/156 (35.26%), Postives = 75/156 (48.08%), Query Frame = 3 Query: 519 PPPVKPHIS---------SAAAPDTESAPSNIGSA-----RKILRTNLTILKRAKRDNTIKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLAYRLTAGHRKPRQILRYYLDFSLEQILTYLLLSA 944 PPPV P SA AP P+ S+ R + IL R +R ++++ L R L A +VLAAD +GWARDS+ Y +F Y AVNVI F+YS FQ L + R DF+++Q+LTYLL+S+ Sbjct: 243 PPPVPPSPPAPAQAPVPPSATAPAPAPVPAPRASSPHVQFRSADQVVPNILSRKRRAAAMQRTALLARGAAAGLCLAALAVLAADTRKGWARDSYSNYTQFRYSEAVNVIGFIYSVFQFVALVELMRRNKHLIPHPKRDLFDFTMDQVLTYLLISS 398
BLAST of FC918257 vs. ExPASy Swiss-Prot
Match: U497H_MAIZE (UPF0497 membrane protein 17 OS=Zea mays PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.902e-12 Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = 3 Query: 657 KKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLAYRLTAGHRKPRQILRYYLDFSLEQILTYLLLSA 944 ++ LL R+ V SL AFSV+A+ + GWA D + R+ ++ Y +AVNVIVF YS QS L + R + YY L+Q+L YLL+SA Sbjct: 221 RELLLALRLATAVLSLAAFSVIASARTSGWAGDYYARHLQYRYAVAVNVIVFAYSVAQSLGKIRHLVSPRFTFRTMSSYYCSLFLDQVLAYLLMSA 316
BLAST of FC918257 vs. ExPASy Swiss-Prot
Match: U497R_ORYSJ (UPF0497 membrane protein Os02g0134500 OS=Oryza sativa subsp. japonica GN=Os02g0134500 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.485e-12 Identity = 55/151 (36.42%), Postives = 77/151 (50.99%), Query Frame = 3 Query: 519 PPPVKPHIS-----SAAAPDTESAPSNIGSARKILRTNLT---ILKRAKRDNTIKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLAYRLTAG-HRKPRQILRYYLDFSLEQILTYLLLSA 944 PPP P A AP AP+ AR + + IL R + ++++ L RV + L A +VLAAD +G+A DS+ Y + Y AVNVI FVYS Q F LA + H PR+ Y+ DF ++Q+L YLL+S+ Sbjct: 105 PPPPAPAAPVLVPPPAPAPRPAPAPAPRVPARAVEHDHRVVPDILLRKRPTAVLQRTALVARVAAALLCLAALAVLAADSRKGFALDSYSNYSQLRYSEAVNVIGFVYSVLQFFVLADLMRRNKHLNPRRKGDYF-DFFMDQVLAYLLISS 254
BLAST of FC918257 vs. ExPASy Swiss-Prot
Match: U4974_SORBI (UPF0497 membrane protein Sb03g029220 OS=Sorghum bicolor GN=Sb03g029220 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11 Identity = 47/146 (32.19%), Postives = 74/146 (50.68%), Query Frame = 3 Query: 507 KHKQPPPVKPHISSAAAPDTESAPSNIGSARKILRTNLTILKRAKRDNTIKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLAYRLTAGHRKPRQILRYYLDFSLEQILTYLLLSA 944 +H+ + H ++AA + S P ++ +A + + +R + T+ R+ V SL AFSV+A+ + GWA D + + ++ Y +AVNVIV YS QSF RL + R + YY L+Q L YLL+SA Sbjct: 277 QHQHQQRQEQHAAAAAVENGGSVPPDVAAA-------VAVGERRELSVTL-------RLATAVLSLAAFSVIASARTSGWAGDYYAHHLQYRYAVAVNVIVCAYSIAQSFGEIRRLISPRFIFRSMSSYYCSLFLDQALAYLLMSA 408 The following BLAST results are available for this feature:
BLAST of FC918257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918257 ID=FC918257; Name=FC918257; organism=Citrus clementina; type=EST; length=944bpback to top |