FC919317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC919317 vs. ExPASy Swiss-Prot
Match: LCYE_ARATH (Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana GN=LUT2 PE=1 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 7.315e-51 Identity = 93/126 (73.81%), Postives = 108/126 (85.71%), Query Frame = 1 Query: 1 YXVGGPKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEAPSFESDNPTFLYVMPMSSTRVFFEETCLASKDGLRFDILKKKLMARLERLGIHVLKTYEEEWSYIPVGGSLPNTEQRNLAYGA 378 Y VGGP+V VQTAYGVEVEVEN+PYDP MVFMDYRD T ++ S E++ PTFLY MPM+ +R+FFEETCLASKD + FD+LK KLM RL+ LGI +LKTYEEEWSYIPVGGSLPNTEQ+NLA+GA Sbjct: 254 YEVGGPRVCVQTAYGVEVEVENSPYDPDQMVFMDYRDYTNEKVRSLEAEYPTFLYAMPMTKSRLFFEETCLASKDVMPFDLLKTKLMLRLDTLGIRILKTYEEEWSYIPVGGSLPNTEQKNLAFGA 379
BLAST of FC919317 vs. ExPASy Swiss-Prot
Match: LCYE_SOLLC (Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum GN=CRTL-E-1 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 3.630e-50 Identity = 92/126 (73.02%), Postives = 106/126 (84.13%), Query Frame = 1 Query: 1 YXVGGPKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEAPSFESDNPTFLYVMPMSSTRVFFEETCLASKDGLRFDILKKKLMARLERLGIHVLKTYEEEWSYIPVGGSLPNTEQRNLAYGA 378 Y +G P+VSVQTAYGVEVEV+NNP+DPSLMVFMDYRD + +A S E+ PTFLY MPMS TRVFFEETCLASKD + FD+LKKKLM RL LG+ + + YEEEWSYIPVGGSLPNTEQ+ LA+GA Sbjct: 251 YELGSPRVSVQTAYGVEVEVDNNPFDPSLMVFMDYRDYLRHDAQSLEAKYPTFLYAMPMSPTRVFFEETCLASKDAMPFDLLKKKLMLRLNTLGVRIKEIYEEEWSYIPVGGSLPNTEQKTLAFGA 376
BLAST of FC919317 vs. ExPASy Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.452e-22 Identity = 54/118 (45.76%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 31 QTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEAPSFESDN---PTFLYVMPMSSTRVFFEETCLASKDGLRFDILKKKLMARLERLGIHVLKTYEEEWSYIPVGGSLPNTEQRNLAYG 375 Q AYG+ EVE +P+D + MVFMD+RD + + N PTFLY MP SS R+F EET L ++ GLR D ++++++ARL LGI V E+E IP+GG LP QR + G Sbjct: 238 QVAYGILAEVEEHPFDVNKMVFMDWRDSHLKNNTDLKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLRIDDIQERMVARLNHLGIKVKSIEEDEHCLIPMGGPLPVLPQRVVGIG 355
BLAST of FC919317 vs. ExPASy Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.452e-22 Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 31 QTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEAPSFESDN---PTFLYVMPMSSTRVFFEETCLASKDGLRFDILKKKLMARLERLGIHVLKTYEEEWSYIPVGGSLPNTEQRNLAYG 375 Q AYG+ EV+ +P+D MVFMD+RD P + N PTFLY MP SS R+F EET L ++ GLR + +++++ ARL+ LGI+V + E+E IP+GG LP QR + G Sbjct: 237 QVAYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIG 354
BLAST of FC919317 vs. ExPASy Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.463e-22 Identity = 55/122 (45.08%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 19 KVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEAPSFESDN---PTFLYVMPMSSTRVFFEETCLASKDGLRFDILKKKLMARLERLGIHVLKTYEEEWSYIPVGGSLPNTEQRNLAYG 375 K Q AYG+ EVE +P+D S MV MD+RD + N PTFLY MP SS ++F EET L ++ GLR D ++++++ARL LGI V E+E IP+GGSLP QR + G Sbjct: 234 KPGYQVAYGILAEVEEHPFDTSKMVLMDWRDSHLGNNMELKERNRKVPTFLYAMPFSSNKIFLEETSLVARPGLRMDDIQERMVARLNHLGIKVKSIEEDEHCVIPMGGSLPVIPQRVVGTG 355
BLAST of FC919317 vs. ExPASy Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.076e-21 Identity = 53/118 (44.92%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 31 QTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEAPSFESDN---PTFLYVMPMSSTRVFFEETCLASKDGLRFDILKKKLMARLERLGIHVLKTYEEEWSYIPVGGSLPNTEQRNLAYG 375 Q AYG+ EVE +P+D + MVFMD+RD + + N PTFLY MP SS R+F EET L ++ GL D ++++++ARL LGI V E+E IP+GG LP QR + G Sbjct: 236 QVAYGILAEVEEHPFDVNKMVFMDWRDSHLKNNVELKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLGMDDIQERMVARLSHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 353
BLAST of FC919317 vs. ExPASy Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.541e-21 Identity = 52/118 (44.07%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 31 QTAYGVEVEVENNPYDPSLMVFMDYRDCT---KQEAPSFESDNPTFLYVMPMSSTRVFFEETCLASKDGLRFDILKKKLMARLERLGIHVLKTYEEEWSYIPVGGSLPNTEQRNLAYG 375 Q AYG+ EVE +P+D MVFMD+RD K E + PTFLY MP SS R+F EET L ++ GL+ + ++++++ARL LGI + E+E IP+GG LP QR + G Sbjct: 241 QVAYGILAEVEEHPFDVDKMVFMDWRDSHLNGKAELNERNAKIPTFLYAMPFSSNRIFLEETSLVARPGLKMEDIQERMVARLNHLGIRIKSIEEDERCVIPMGGPLPVIPQRVVGIG 358
BLAST of FC919317 vs. ExPASy Swiss-Prot
Match: NXS_SOLTU (Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.488e-19 Identity = 53/118 (44.92%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 31 QTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEAPSFESDN---PTFLYVMPMSSTRVFFEETCLASKDGLRFDILKKKLMARLERLGIHVLKTYEEEWSYIPVGGSLPNTEQRNLAYG 375 Q A+GV VEV+N+P+D MV MD+RD P +N PTFLY MP VF EET L S+ L + +K++++ARL LGI V EEE IP+GG LP Q +A G Sbjct: 236 QIAHGVLVEVDNHPFDLDKMVLMDWRDSHLGNEPYLRVNNAKEPTFLYAMPFDRNLVFLEETSLVSRPVLSYMEVKRRMVARLRHLGIKVRSVIEEEKCVIPMGGPLPRIPQNVMAIG 353
BLAST of FC919317 vs. ExPASy Swiss-Prot
Match: CCS_CITSI (Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis GN=CCS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.259e-18 Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 31 QTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEAPSFESDN---PTFLYVMPMSSTRVFFEETCLASKDGLRFDILKKKLMARLERLGIHVLKTYEEEWSYIPVGGSLPNTEQRNLAYG 375 Q A+G+ EVE++P+D MV MD+RD P + N PTFLY MP S VF EET L S+ L + +K ++ ARL +GI V + E+E IP+GG LP Q +A G Sbjct: 241 QIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVSRPVLSYKEVKSRMAARLRHMGIRVKRVIEDEKCLIPMGGPLPVIPQSVMAIG 358
BLAST of FC919317 vs. ExPASy Swiss-Prot
Match: CCS_CAPAN (Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum GN=CCS PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.392e-17 Identity = 49/118 (41.53%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 31 QTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEAPSFESDN---PTFLYVMPMSSTRVFFEETCLASKDGLRFDILKKKLMARLERLGIHVLKTYEEEWSYIPVGGSLPNTEQRNLAYG 375 Q A+G+ EV+N+P+D M+ MD+RD P N PTFLY MP VF EET L S+ L + +K++++ARL LGI V EEE I +GG LP Q +A G Sbjct: 236 QVAHGILAEVDNHPFDLDKMMLMDWRDSHLGNEPYLRVKNTKEPTFLYAMPFDRNLVFLEETSLVSRPMLSYMEVKRRMVARLRHLGIKVRSVLEEEKCVITMGGPLPRIPQNVMAIG 353 The following BLAST results are available for this feature:
BLAST of FC919317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919317 ID=FC919317; Name=FC919317; organism=Citrus clementina; type=EST; length=397bpback to top |