FC920200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.258e-40 Identity = 103/203 (50.74%), Postives = 127/203 (62.56%), Query Frame = 3 Query: 84 ASSLALKRLVSFNLI--PRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSV--RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEE 668 +S+LAL+RL+S + + PRALR V P A S SR FNTNA R Y TRSLSQ+LNFMDQ++E P S TRG G+RRGW+ KE DDAL+L IDMPGL +EDV+++LEQNTLVIR S RR+TSRI+LPEK+Y+TD+IKAEMKNGVLKV +PK+KE+ Sbjct: 4 SSALALRRLLSSSTVAVPRALRA-VRPVAAS-SRLFNTNAARNYEDGVDRNHHSNRHVSRHGGDFFSHILDPFTP-----TRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKED 199
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.016e-39 Identity = 99/198 (50.00%), Postives = 120/198 (60.61%), Query Frame = 3 Query: 81 MASSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXX--SVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEE 668 MASSLALKR +S L+ + + P A+SASR FNTNA+RQY RSLSQVLN +D +T++P S RRGWDA+ET+DAL L +DMPGLGKEDV++S+EQNTL I+ S RR++SRIDLPEKLY+ D IKAEMKNGVLKVTVPK+KEE Sbjct: 1 MASSLALKRFLSSGLLSSSF---LRPVASSASRSFNTNAMRQYDQHSDDRNVDVYRHSFPRTRRDDLLLSDVFDPFSPP-RSLSQVLNMVDLLTDNPVLSAAS---RRGWDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSSRIDLPEKLYKIDVIKAEMKNGVLKVTVPKMKEE 191
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.009e-38 Identity = 98/204 (48.04%), Postives = 121/204 (59.31%), Query Frame = 3 Query: 81 MASSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIR----XXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEE 668 MAS+LALKRL+S ++ PR+ R + P+ +S R FNTNAVR Y TRS+SQVLN MDQ E+P S TRG G RRGWD KE DDAL L IDMPGL +EDV+++LEQ+TLVIR RR+TSRI LP+K+Y+ D+IKAEMKNGVLKV +PK+KE+ Sbjct: 1 MASALALKRLLSSSIAPRS-RSVLRPAVSS--RLFNTNAVRSYDDDGENGDGVDLYRRSVPRRRGDFFSDVFDPFSP--TRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQ 199
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.079e-36 Identity = 60/89 (67.42%), Postives = 73/89 (82.02%), Query Frame = 3 Query: 402 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEE 668 RGWDA+ET+DAL+L +DMPGL KEDV++S+EQNTL+I+ S RRYTSRIDLP+KLY+ DQI+AEMKNGVLKV VPK+KEE Sbjct: 112 RGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDEEESARRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVPKMKEE 200 HSP 2 Score: 39.6614 bits (91), Expect = 4.079e-36 Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 3 Query: 81 MASSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQY 209 MASSL KR +S +L+ R+L + P+A+++ R F+TNA+RQY Sbjct: 1 MASSLIAKRFLSSSLLSRSL---LRPAASASHRSFDTNAMRQY 40 HSP 3 Score: 25.7942 bits (55), Expect = 4.079e-36 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 296 CV*SIFTNKEPEPGPELHGSDDGE 367 CV SIF++ E EPG E G G+ Sbjct: 72 CVGSIFSDSEFEPGSEHDGPGHGQ 95
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.541e-33 Identity = 83/197 (42.13%), Postives = 109/197 (55.33%), Query Frame = 3 Query: 87 SSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRGG---LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEE 668 +S+AL+RL S NL+ + + S SR FNTNA TRS+ Q++N MDQ+ E+PF + +RG +RRGWD +E ++AL L +DMPGL KEDV+VS+E NTL+I+ RRY+SRI+L LY+ D IKAEMKNGVLKVTVPK+KEE Sbjct: 2 ASMALRRLASRNLVSGGIFRPL-----SVSRSFNTNAQMGRVDHDHELDDRSNRAPISRRGDFPASFFSDVFDPFRATRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEE 193
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.678e-25 Identity = 80/211 (37.91%), Postives = 110/211 (52.13%), Query Frame = 3 Query: 81 MASSLALKRLVSFNLIPRALRCTVAPSATSA---------SRFFNTNA-VRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--RSLSQVLNFMDQMTESPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSV--RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEER 671 MAS +A KR+ F L+ + L + A A SA SR +NT A +R++ + +SL ++L+ MD + +P LRRGW+AKE+++AL+L +DMPGLGKE V+V EQN+LVI+ RY+ RI+L ++YR DQIKAEMKNGVLKV VPKVKEE+ Sbjct: 1 MASIVASKRIPLFRLVEQLLAASPAQGAASALRPVAVAGGSRAYNTGAQLRRHERDESDDDSGRGYDTRRPTRDATMPAFFSDVFRDPFSAPQSLGRLLSLMDDLA-TPAGRAGAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAAPARYSGRIELAPEVYRMDQIKAEMKNGVLKVVVPKVKEEQ 210
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS26M_ORYSJ (26.2 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP26.2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19 Identity = 59/124 (47.58%), Postives = 74/124 (59.68%), Query Frame = 3 Query: 324 SLSQVLNFM-DQMTESPFFSGTRG----GLRRG--WDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVR--RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEE 668 SL ++L M D + GT G RRG W AKE DDA++L + MPGLGKE V+V EQN+LVI+ RYT RI+LP ++ D+IKAEMKNGVL+V VPK+KEE Sbjct: 114 SLGRLLALMEDAAVATAAAPGTNGLATAAARRGGWWVAKEDDDAVHLKVSMPGLGKEHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNGVLRVAVPKLKEE 237
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.553e-17 Identity = 53/128 (41.41%), Postives = 74/128 (57.81%), Query Frame = 3 Query: 321 RSLSQVLNFMDQMTES--PFFSGTRGG-----LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEER 671 R++ Q+L+ MD+M E P RGG +R WD KE + + + DMPGL KEDV++S+E N LVI + SV Y +R+ LP+ + D+IKAE+KNGVL +T+PK K ER Sbjct: 93 RTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEK-DKIKAELKNGVLFITIPKTKVER 219
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.075e-15 Identity = 51/128 (39.84%), Postives = 74/128 (57.81%), Query Frame = 3 Query: 321 RSLSQVLNFMDQMTESPF-FSGTR---GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXXSVRRYTS---RIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEER 671 RS+ Q+L+ MD++ E F G G +R WD K+ + + + DMPGL KEDV+VS+E + LVI + S R Y+S R+ LP+ + D++KAE+KNGVL +T+PK K ER Sbjct: 47 RSMRQILDTMDRVFEDTMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEK-DKVKAELKNGVLYITIPKTKVER 173
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 44/127 (34.65%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 321 RSLSQVLNFMDQMTESPF-FSGTR----GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI-----RXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEER 671 R++ Q+++ MD++ E F G+R G +R WD K+ ++ + + DMPGL KE+V+VS+E + LVI + + Y +R+ LP+ + + D++KAE+KNGVL +++PK K E+ Sbjct: 108 RTMRQMMDTMDRLFEDTMTFPGSRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDK-DKVKAELKNGVLLISIPKTKVEK 233 The following BLAST results are available for this feature:
BLAST of FC920200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920200 ID=FC920200; Name=FC920200; organism=Citrus clementina; type=EST; length=682bpback to top |