FC920214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: BCKD_RAT ([3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Rattus norvegicus GN=Bckdk PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 5.440e-27 Identity = 70/230 (30.43%), Postives = 122/230 (53.04%), Query Frame = 2 Query: 38 AKKLSETFSKSLIEEVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDERDFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPEFYIYGDPSFTFPYV 727 +K ++ +++S I+ V ++ T + Y G +LL S ++L +ELP+RIA R +LP+ + P +L V + Y+ +F+ L FP I+ +DE + Q+++ + H +VV ++A GL++ +K + ED + FLD+ SR+GIRML H+ LH P +G I T++SP + + A +C +YG+AP I G + FP++ Sbjct: 47 SKTVTSFYNQSAIDVVAEKPSVRLTPTMMLYS---GRSQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHI------EDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDK--PDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFI 265
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: BCKD_HUMAN ([3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Homo sapiens GN=BCKDK PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 7.105e-27 Identity = 70/230 (30.43%), Postives = 121/230 (52.61%), Query Frame = 2 Query: 38 AKKLSETFSKSLIEEVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDERDFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPEFYIYGDPSFTFPYV 727 +K ++ +++S I+ ++ T + Y G +LL SA++L +ELP+RIA R LP+ + P +L V + Y+ +F+ L FP I+ +DE + Q+++ + H +VV ++A GL++ +K + ED + FLD+ SR+GIRML H+ LH P +G I T++SP + + A +C +YG+AP I G + FP++ Sbjct: 47 SKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYA---GRSQDGSHLLKSARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHI------EDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDK--PDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFI 265
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: BCKD_BOVIN ([3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Bos taurus GN=BCKDK PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.583e-26 Identity = 70/230 (30.43%), Postives = 122/230 (53.04%), Query Frame = 2 Query: 38 AKKLSETFSKSLIEEVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDERDFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPEFYIYGDPSFTFPYV 727 +K ++ +++S I+ ++ T + Y G +LL SA++L +ELP+RIA R +LP+ + P +L V + Y+ +F+ L FP I+ +DE + Q+++ + H +VV ++A GL++ +K + ED + FLD+ SR+GIRML H+ LH P +G I T++SP + + A +C +YG+AP I G + FP++ Sbjct: 47 SKTVTSFYNQSAIDVAAEKPSVRLTPTMMLYS---GRSQDGSHLLKSARYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEARYCQLVRQLLDDHKDVVTLLAEGLRESRKYI------EDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDK--PDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFI 265
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: BCKD_MOUSE ([3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Mus musculus GN=Bckdk PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.526e-26 Identity = 68/230 (29.57%), Postives = 121/230 (52.61%), Query Frame = 2 Query: 38 AKKLSETFSKSLIEEVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDERDFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPEFYIYGDPSFTFPYV 727 +K ++ +++S I+ ++ T + Y G +LL S ++L +ELP+RIA R +LP+ + P +L V + Y+ +F+ L FP I+ +DE + Q+++ + H +VV ++A GL++ +K + +D + FLD+ SR+GIRML H+ LH P +G I T++SP + + A +C +YG+AP I G + FP++ Sbjct: 47 SKTVTSFYNQSAIDVAAEKPSVRLTPTMMLYS---GRSQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHI------QDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDK--PDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFI 265
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK3_MOUSE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3, mitochondrial OS=Mus musculus GN=Pdk3 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.224e-23 Identity = 75/215 (34.88%), Postives = 114/215 (53.02%), Query Frame = 2 Query: 77 EEVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKE--MDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELH----NPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPEFYI 694 +++ R+ + ++++ ++FG + S FL KELP+R+A E+ LP L +P+V V+ WY+ SF +L + + +S D R +F ++ I+ RHN+VVP MA G+ + K++ DP I I FLDRFY +RI RMLI QH L NP P H IG ID + V ++A E A +C + Y APE + Sbjct: 14 KQIERYSRFSPSPLSIKQFLDFGRDNACEKT--SYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYEN-KSPEDPRVLDNFLNVLINIRNRHNDVVPTMAQGVIEYKEKFGFDPFI----SSNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPAHPKH-IGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEV 220
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK3_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3, mitochondrial OS=Homo sapiens GN=PDK3 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.129e-23 Identity = 74/215 (34.42%), Postives = 115/215 (53.49%), Query Frame = 2 Query: 77 EEVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKE--MDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELH----NPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPEFYI 694 +++ R+ + ++++ ++FG + S FL KELP+R+A E+ LP L +P+V V+ WY+ SF +L + + +S D + +F Q++ ++ RHN+VVP MA G+ + K++ DP I I FLDRFY +RI RMLI QH L NP P H IG ID + V ++A E A +C + Y APE + Sbjct: 14 KQIERYSRFSPSPLSIKQFLDFGRDNACEKT--SYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYEN-KSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFI----STNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKH-IGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEV 220
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK_DROME ([Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Drosophila melanogaster GN=Pdk PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.365e-22 Identity = 69/196 (35.20%), Postives = 101/196 (51.53%), Query Frame = 2 Query: 116 VTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDE-RDFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELH--NPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPEFYI 694 ++++ M+FG +K I FL KELP+R+A E+ LP L +V +V WY+ SF D+ + T D + F + I+ RHN+VV MA G+ ++K+ ++ I FLDR YMSRI IRMLI QH L NP+ IG +D V R+A E+A +C + Y ++P I Sbjct: 33 LSIKQFMDFGQNACEKKSYI---FLRKELPVRLANIMKEIALLPDNLLHTRSVSEVSSWYVKSFEDVLVYEKAEPTHDNLQKFVADLDLIRNRHNDVVQTMAQGVIEMKENEGGQVDAPTESSIQYFLDRLYMSRISIRMLINQHTLLFGGNPHAGGRHIGCLDPACDLSDVVRDAYENARFLCDQYYLTSPALEI 225
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK4_RAT ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Rattus norvegicus GN=Pdk4 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.365e-22 Identity = 67/195 (34.36%), Postives = 106/195 (54.36%), Query Frame = 2 Query: 116 VTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPP--PHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPE 685 ++++ +++FGS+ + S FL +ELP+R+A E++ LP L P+V V+ WY+ S DL F + +S D++ DF + ++ RH+NVVP MA G+ + K V + FLDRFYM+RI RML+ QH+ + + + P IG ID V V +A E A +C + Y ++PE Sbjct: 35 LSMKQLLDFGSENACERTSFS--FLRQELPVRLANILKEIDILPEHLVNTPSVQLVKSWYIQSLMDLVEFHE-KSPEDQKVLSDFVDTLVKVRNRHHNVVPTMAQGILEYKDNCTVDPVTN--QNLQYFLDRFYMNRISTRMLMNQHILIFSDSKTGNPSHIGSIDPNCDVVAVVEDAFECAKMLCDQYYLTSPE 224
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK4_MOUSE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Mus musculus GN=Pdk4 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.365e-22 Identity = 73/226 (32.30%), Postives = 118/226 (52.21%), Query Frame = 2 Query: 26 AAMAAKKLSETFSKSLI-EEVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPP--PHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPE 685 A + S S SL+ EV + + ++++ +++FGS+ + S FL +ELP+R+A E++ LP L P+V V+ WY+ S DL F + +S D++ +F + ++ RH+NVVP MA G+ + K V + FLDRFYM+RI RML+ QH+ + + + P IG ID V V ++A E A +C + Y ++PE Sbjct: 4 ARFVMRSASSLSSASLVPREVELFSRYSPSPLSMKQLLDFGSENACERT--SFAFLRQELPVRLANILKEIDILPDRLVNTPSVQLVKSWYIQSLMDLVEFHE-KSPEDQKALSEFVDTLVKVRNRHHNVVPTMAQGILEYKDTCTVDPVTN--QNLQYFLDRFYMNRISTRMLMNQHILIFSDSKTGNPSHIGSIDPNCDVVAVVQDAFECAKMLCDQYYLTSPE 224
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK2_RAT ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial OS=Rattus norvegicus GN=Pdk2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.365e-22 Identity = 72/200 (36.00%), Postives = 104/200 (52.00%), Query Frame = 2 Query: 116 VTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELH----NPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPEFYI 694 ++++ ++FGS + S FL +ELP+R+A E+ LP + P+V V+ WY+ S D+ F D + D R FT + I+ RHN+VVP MA G+ + K V I FLDRFY+SRI IRMLI QH + NP P H IG ID S V ++A + A +C + Y ++P+ I Sbjct: 31 LSMKQFLDFGSSNACEKT--SFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLD-KDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSN--QNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKH-IGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEI 224 The following BLAST results are available for this feature:
BLAST of FC920214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920214 ID=FC920214; Name=FC920214; organism=Citrus clementina; type=EST; length=744bpback to top |