FC920236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_BETVU (Eukaryotic translation initiation factor 6 (Fragment) OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 7.655e-71 Identity = 132/157 (84.08%), Postives = 142/157 (90.45%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSTE 667 MATRL FEN+CEVGVFSKLTNAYCLVAIGGSE+FYSTFE ELAD PVVKTSI GTRIIG NKNGLL+PHTTTDQELQHLRN LPD VVVQRIEE+LSALGNCIACND+VALTHTDLD+ETEE+IADVLGVEVF QTIAGNILVGSYC+ + + Sbjct: 1 MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFETELADYIPVVKTSIAGTRIIGPNVCRNKNGLLVPHTTTDQELQHLRNCLPDSVVVQRIEEKLSALGNCIACNDYVALTHTDLDKETEELIADVLGVEVFGQTIAGNILVGSYCAITNK 157
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_YEAST (Eukaryotic translation initiation factor 6 OS=Saccharomyces cerevisiae GN=TIF6 PE=1 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.277e-65 Identity = 119/157 (75.80%), Postives = 135/157 (85.99%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSTE 667 MATR FENS E+GVFSKLTN YCLVA+GGSE+FYS FEAEL D P+V T+I GTRIIGR+ AGN+ GLL+P TTDQELQHLRNSLPD V +QR+EERLSALGN I CND+VAL H D+DRETEE+I+DVLGVEVFRQTI+GNILVGSYCS S + Sbjct: 1 MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQ 157
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_MOUSE (Eukaryotic translation initiation factor 6 OS=Mus musculus GN=Eif6 PE=1 SV=2) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 112/157 (71.34%), Postives = 131/157 (83.44%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSTE 667 MA R FEN+CEVG F+KLTNAYCLVAIGGSE+FYS FE EL+D PVV SI G RIIGR+C GN++GLL+P+ TTDQELQH+RNSLPD V ++R+EERLSALGN CND+VAL H DLDRETEE++ADVL VEVFRQT+A +LVGSYC FS + Sbjct: 1 MAVRASFENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQ 157
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_SCHPO (Eukaryotic translation initiation factor 6 OS=Schizosaccharomyces pombe GN=tif6 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.108e-61 Identity = 114/159 (71.70%), Postives = 134/159 (84.28%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSTEEA 673 MA R FENS E+GVFS LTN+Y LVA+GGSE+FYS FEAEL DV PVV T+IGGTRIIGRL GN+ GLL+P +TTD ELQHLRNSLPD V +QR++ERLSALGN +ACND+VAL H D++RETEE+IADVL VEVFRQT+AGN+L GSYC+ S + A Sbjct: 1 MALRAQFENSNEIGVFSNLTNSYALVALGGSENFYSVFEAELGDVVPVVHTTIGGTRIIGRLTCGNRKGLLVPSSTTDNELQHLRNSLPDPVKIQRVDERLSALGNIVACNDYVALVHPDIERETEEIIADVLDVEVFRQTVAGNVLTGSYCALSNQGA 159
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_HUMAN (Eukaryotic translation initiation factor 6 OS=Homo sapiens GN=EIF6 PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.210e-61 Identity = 110/157 (70.06%), Postives = 130/157 (82.80%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSTE 667 MA R FEN+CE+G F+KLTN YCLVAIGGSE+FYS FE EL+D PVV SI G RIIGR+C GN++GLL+P+ TTDQELQH+RNSLPD V ++R+EERLSALGN CND+VAL H DLDRETEE++ADVL VEVFRQT+A +LVGSYC FS + Sbjct: 1 MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQ 157
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_DICDI (Probable eukaryotic translation initiation factor 6 OS=Dictyostelium discoideum GN=eif6 PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.499e-61 Identity = 115/159 (72.33%), Postives = 133/159 (83.65%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSTEEA 673 MATRL +ENSC+VGVF KLTN YCLV GS+ F T E LAD PVV+TSI GTRI+GRL AGNKNGLLLP+T TDQELQ +RNSLPD VVVQRIEE+ SALGNCIA ND+VAL H D+DRETEE+IADVLGVEVFRQT++GN+LVG+YC+ + + A Sbjct: 1 MATRLQYENSCDVGVFLKLTNKYCLVGQCGSKQFLHTVENRLADHIPVVETSIAGTRIVGRLSAGNKNGLLLPNTCTDQELQQIRNSLPDDVVVQRIEEKFSALGNCIATNDYVALVHPDIDRETEEIIADVLGVEVFRQTVSGNVLVGTYCALTNQGA 159
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_BOVIN (Eukaryotic translation initiation factor 6 OS=Bos taurus GN=EIF6 PE=2 SV=2) HSP 1 Score: 231.876 bits (590), Expect = 2.729e-60 Identity = 109/157 (69.43%), Postives = 129/157 (82.17%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSTE 667 MA R FEN+CE+G F+KLTN+YCLVAIGGSE+FYS FE ELA PVV SI G RIIGR+C GN++GLL+P+ TTDQELQH+RN LPD V ++R+EERLSALGN CND+VAL H DLDRETEE++ADVL VEVFRQT+A +LVGSYC FS + Sbjct: 1 MAVRASFENNCEIGCFAKLTNSYCLVAIGGSENFYSVFEGELAGTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNCLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQ 157
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_DROME (Probable eukaryotic translation initiation factor 6 OS=Drosophila melanogaster GN=eIF6 PE=2 SV=3) HSP 1 Score: 229.565 bits (584), Expect = 1.354e-59 Identity = 112/157 (71.34%), Postives = 131/157 (83.44%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSTE 667 MA R+ FEN+ ++GVF+KLTN YCLVAIGGSE+FYS FEAEL D PVV ++GG RIIGRL GN+NGLL+P++TTD+ELQHLRNSLPD V + R+EERLSALGN IACND+VAL H DLD+ETEE+IADVL VEVFRQTIA N LVGSY S + Sbjct: 1 MALRVQFENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVHANVGGCRIIGRLTVGNRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEERLSALGNVIACNDYVALVHPDLDKETEEIIADVLKVEVFRQTIADNSLVGSYAVLSNQ 157
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_ARATH (Eukaryotic translation initiation factor 6 OS=Arabidopsis thaliana GN=At2g39820 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.643e-55 Identity = 108/157 (68.79%), Postives = 130/157 (82.80%), Query Frame = 2 Query: 197 MATRLMFENS-CEVGVFSKLTNAYCLV-AIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFS 661 MATRL ++N+ CE+GVFSKLTNAYCLV A S +F++ +E++L V P+V TSIGG+ IG LC GNKNGLLL HT TDQELQHLR+SLPD+VVVQRIEE + ALGN IACND+VAL H L+++TEE+I+DVLGVEV+RQTIA N LVGSYCS S Sbjct: 1 MATRLQYDNNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGTIGSLCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVHPKLEKDTEEIISDVLGVEVYRQTIANNELVGSYCSLS 157
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_CAEEL (Eukaryotic translation initiation factor 6 OS=Caenorhabditis elegans GN=eif-6 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 9.401e-53 Identity = 97/156 (62.18%), Postives = 126/156 (80.77%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFST 664 MA R+ +E S +VGVF LTN+YCLV +GG+++FYS EAEL+D+ PVV TSI TRI+GRL GN++GLL+P+ TTDQELQHLRNSLPD+V ++R++ERLSALGN IACNDHVA+ H ++ ETE+ + +VL VEVFR ++A N LVGSYC S+ Sbjct: 1 MALRVDYEGSNDVGVFCTLTNSYCLVGVGGTQNFYSILEAELSDLIPVVHTSIASTRIVGRLTVGNRHGLLVPNATTDQELQHLRNSLPDEVAIRRVDERLSALGNVIACNDHVAIVHAEISAETEQALVEVLKVEVFRVSLAQNSLVGSYCILSS 156 The following BLAST results are available for this feature:
BLAST of FC920236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920236 ID=FC920236; Name=FC920236; organism=Citrus clementina; type=EST; length=724bpback to top |