FC920271

Overview
NameFC920271
Unique NameFC920271
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11919 contig Ccv1_Contig11919:329..936. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920271 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.519e-33
Identity = 81/192 (42.19%), Postives = 124/192 (64.58%), Query Frame = 2
Query:   50 GP*KEVVCVTGAYGFIGTWVVRTLLEKGYTNIHPAIFPGTD---ASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAI 604
            G   E VCVTGA GFIG+W+V  LLE GYT +   +   T+     HL  LP A + ++ +++A++ D  +   AI+GC GVFH+A+P   +  KDPE E++ P + G L++L+A +K   VR++V TSS  ++  N    Q  V DE++W+D++FC+S K+  W Y +SKTLAE+AAW++A++N  D + I
Sbjct:    2 GSESESVCVTGASGFIGSWLVMRLLEHGYT-VRATVRDPTNQKKVKHLLDLPKA-ETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFES-KDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTV--NVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITI 188          
BLAST of FC920271 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 4.597e-33
Identity = 85/188 (45.21%), Postives = 114/188 (60.64%), Query Frame = 2
Query:   59 KEVVCVTGAYGFIGTWVVRTLLEKGYTNIHPAIFPGT--DASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAI 604
            KE VCVTGA GFIG+W+V  LLE+GY        PG      HL  LP A  L + +++A++ +  +   AI GC GVFH+A+P   +  KDPE E++ P V G L +++A  K   VRR V TSS  ++  N    Q  V DE  W+DL+F  S K+  W Y +SKTLAEKAAW+FAE+ G D ++I
Sbjct:    5 KETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTL-LTLWKADLSEEGSYDDAINGCDGVFHVATPMDFES-KDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTV--NVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFISI 188          
BLAST of FC920271 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.841e-33
Identity = 80/192 (41.67%), Postives = 124/192 (64.58%), Query Frame = 2
Query:   50 GP*KEVVCVTGAYGFIGTWVVRTLLEKGYTNIHPAIFPGTD---ASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAI 604
            G   E VCVTGA GFIG+W+V  LLE GYT +   +   T+     HL  LP A + ++ +++A++ D  +   AI+GC GVFH+A+P   +  +DPE E++ P + G L++L+A +K   VR++V TSS  ++  N    Q  V DE++W+D++FC+S K+  W Y +SKTLAE+AAW++A++N  D + I
Sbjct:    2 GSESESVCVTGASGFIGSWLVMRLLEHGYT-VRATVRDPTNQKKVKHLLDLPKA-ETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFES-RDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTV--NVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITI 188          
BLAST of FC920271 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.979e-32
Identity = 78/186 (41.94%), Postives = 116/186 (62.37%), Query Frame = 2
Query:   62 EVVCVTGAYGFIGTWVVRTLLEKGYTNIHPAIFPGT--DASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAI 604
            E VCVTGA GFIG+W++  LLE+GYT       P       HL  LP A K N+ +++A++ +  +   A++GC GVFH+A+P   +  KDPE E++ P + G L++L++  K  +RRVV TSS  ++  N    Q  V DET W+ LDF +S K+  W Y +SK LAE+AAW++A +N  + ++I
Sbjct:   23 ETVCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNA-KTNLTLWKADLHEEGSFDAAVDGCTGVFHIATPMDFES-KDPENEMIKPTINGMLDILKSCVKAKLRRVVFTSSGGTV--NVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNLEFISI 204          
BLAST of FC920271 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.252e-30
Identity = 81/188 (43.09%), Postives = 115/188 (61.17%), Query Frame = 2
Query:   59 KEVVCVTGAYGFIGTWVVRTLLEKGYTNIHPAIFPGT--DASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAI 604
            K  V VTGA GF+G+W+V  LL+ GYT       P        L  LPGAT+  + +++A++ +  +   AI GC GVFH+A+P      KDPE E++ P V+G ++++ A K+ G VRR+V TSS  ++  N    Q  V DE SWTD+DFC+  K+  W Y +SKTLAEKAA  +A ++G D+V I
Sbjct:   10 KGTVLVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVGKTKPLMDLPGATE-RLSIWKADLAEEGSFHDAIRGCTGVFHVATPMDFLS-KDPENEVIKPTVEGMISIMRACKEAGTVRRIVFTSSAGTV--NLEERQRPVYDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHGLDLVTI 193          
BLAST of FC920271 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.635e-30
Identity = 81/185 (43.78%), Postives = 115/185 (62.16%), Query Frame = 2
Query:   68 VCVTGAYGFIGTWVVRTLLEKGYTNIHPAIFPG--TDASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAI 604
            VCVTGA GFIG+W+V  LLE+GY        PG      HL  LP A + N+ +++A++    +   AIEGC GVFH+A+P   +  KDPE E++ P ++G L+++ + AK   V+++V TSS  ++  N    Q  V DE+ W+DLDF  S K+  W Y +SKTLAEKAA E A++N  D V+I
Sbjct:    9 VCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGDMKKVKHLLELPKA-ETNLTLWKADLTQEGSFDEAIEGCHGVFHVATPMDFES-KDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTSSAGTV--NVQETQLPVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAMEAAKENNIDFVSI 189          
BLAST of FC920271 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.135e-30
Identity = 77/192 (40.10%), Postives = 121/192 (63.02%), Query Frame = 2
Query:   50 GP*KEVVCVTGAYGFIGTWVVRTLLEKGYTNIHPAIFPGTD---ASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAI 604
            G   E VCVTGA GFIG+W+V  LLE+  T +   +   T+     HL  LP A + ++ +++A++ D  +   AI+GC GVFH+A+P   +  KDPE E++ P ++G L ++++ A    VRR+V TSS  ++  N    Q  V DE+ W+D++FC++ K+  W Y +SKTLAE+AAW++A++N  D + I
Sbjct:    2 GSQSETVCVTGASGFIGSWLVMRLLERRLT-VRATVRDPTNVKKVKHLLDLPKA-ETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFES-KDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTV--NIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITI 188          
BLAST of FC920271 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.135e-30
Identity = 77/186 (41.40%), Postives = 115/186 (61.83%), Query Frame = 2
Query:   68 VCVTGAYGFIGTWVVRTLLEKGYTNIHPAIFPGTD---ASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAI 604
            VCVTGA GFIG+W+V  LLE+GY  +H  +    D     HL  LP A + N+++++A++    +   AI+GC GVFHLA+P   +  KDPE E++ P ++G L+++ +  K   V+++V TSS  ++  N    Q  V DE+ W+DLDF  S K+  W Y +SKTLAEKAAW+  + N    ++I
Sbjct:    9 VCVTGAAGFIGSWLVMRLLERGYV-VHATVRDPGDLKKVKHLLELPKA-QTNLKLWKADLTQEGSFDEAIQGCHGVFHLATPMDFES-KDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGTV--NGQEKQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNISFISI 189          
BLAST of FC920271 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.361e-29
Identity = 76/188 (40.43%), Postives = 115/188 (61.17%), Query Frame = 2
Query:   59 KEVVCVTGAYGFIGTWVVRTLLEKGYTNIHPAIFPGT--DASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAI 604
            K  V VTGA GF+G+W+V  LL+ GYT       P        L  LPGA K  + +++A++ ++ + + AI GC GVFH+A+P   D  +DPE E++ P V+G L+++ A K+ G V+R+V TSS  S+  N         D+ +W+D+D+C+  K+  W Y +SK LAEKAA E+A +NG D ++I
Sbjct:    5 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGA-KERLSIWKADLSEDGSFNEAIAGCTGVFHVATPMDFDS-QDPENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSV--NIEERPRPAYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISI 188          
BLAST of FC920271 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 4.027e-29
Identity = 79/186 (42.47%), Postives = 116/186 (62.37%), Query Frame = 2
Query:   68 VCVTGAYGFIGTWVVRTLLEKGYTNIHPAIFPGTD---ASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAI 604
            VCVTGA GFIG+W+V  LLE+GY N+H  +    +     HL  LP A   N+ +++A++    +   AI+GC+GVFH+A+P   +  KDPE E++ P V+G L+++E+ AK   V+R+V TSS  ++  +    Q    D+TSW+DLDF  + K+  W Y  SK LAEKAA E A+K   D ++I
Sbjct:   18 VCVTGAAGFIGSWLVMRLLERGY-NVHATVRDPENKKKVKHLLELPKA-DTNLTLWKADLTVEGSFDEAIQGCQGVFHVATPMDFES-KDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTL--DVQEQQKLFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNIDFISI 198          
The following BLAST results are available for this feature:
BLAST of FC920271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
DFRA_MALDO3.519e-3342.19Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_ARATH4.597e-3345.21Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_PYRCO7.841e-3341.67Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_DIACA2.979e-3241.94Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_MAIZE1.252e-3043.09Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_CALCH1.635e-3043.78Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
DFRA_VITVI2.135e-3040.10Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_GERHY2.135e-3041.40Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]
DFRA_HORVU2.361e-2940.43Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_PETHY4.027e-2942.47Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32006B06EF RVDevelop1 Citrus clementina cDNA clone C32006B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920271 ID=FC920271; Name=FC920271; organism=Citrus clementina; type=EST; length=608bp
CGGGACACTTCACAAAATCCTCACATACTTAAAGACAAAAAGGATGAACG
GGCCATAAAAGGAAGTAGTTTGCGTGACTGGAGCCTACGGGTTCATCGGA
ACATGGGTGGTCCGAACCCTTCTAGAAAAAGGCTACACCAACATTCACCC
TGCCATCTTTCCCGGCACTGACGCATCCCACTTGTTCAGCCTCCCAGGCG
CCACCAAGCTCAACGTCCGTGTTTACGAGGCCAATATCTTAGACAACGAA
GCAATTTCCAGGGCCATCGAGGGTTGCAAGGGGGTCTTCCATCTTGCCTC
TCCTAACACCCTGGATGATCCCAAGGACCCCGAAAAGGAGCTGCTCATTC
CTGCTGTTCAAGGCACCCTCAATGTCTTAGAGGCTGCCAAGAAGTTTGGT
GTCAGGCGTGTGGTGCTCACCAGCTCCATTTCTTCCATTGTGCCTAATCC
CAATTGGCCTCAAGGCAAGGTCATTGATGAAACTTCTTGGACCGACCTTG
ACTTTTGCAAGTCTCACAAGATATGGTATTCAATGTCAAAGACACTAGCA
GAAAAAGCAGCATGGGAATTTGCAGAGAAGAATGGAACGGATGTGGTGGC
AATCCATC
back to top