FC920537
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920537 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.334e-33 Identity = 77/163 (47.24%), Postives = 103/163 (63.19%), Query Frame = 1 Query: 175 HQFCAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAAL--KKRRTSSDEDAHAWLSGVLTNHVTCLDGLDGSAT----KLMEPRLVELMARAANSLAILVAISPYNTNVIQ 645 H+ C ++ ++ SC+AM+SE T +N N LL FL K+T IQ+ E AN RIN+P+ + AL DC EL++LS +R+ DS++ L + T S ED H WLSGVLTNHVTCLDGL+ +T LME L EL+ RA SLAI V + P +NVI+ Sbjct: 45 HKICDQSVNKESCLAMISEVTGLNMADHRN---LLKSFLEKTTPRIQKAFETANDASRRINNPQERTALLDCAELMDLSKERVVDSISILFHQNLTTRSHEDLHVWLSGVLTNHVTCLDGLEEGSTDYIKTLMESHLNELILRARTSLAIFVTLFPAKSNVIE 204
BLAST of FC920537 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 7.917e-27 Identity = 82/217 (37.79%), Postives = 116/217 (53.46%), Query Frame = 1 Query: 10 MATIDRPLLLKLHTPKASKRKXXXXXXXXXXXMCSATFVAIHCIKAINSNNHWSLHQ--FCAKAQDQSSCIAMVSETTSINATTKMNE-VDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSDEDAHAWLSGVLTNHVTCLDGLDGSATKLM--EPRLVELMARAANSLAILVAISPYNTNVIQ 645 MAT +PLL K H K FVA+ + + + + + C AQD C++ VS+ S T ++ + +L FL S + I V +K++IN R Q ALTDC+ELL+LSVD + DS+AA+ KR S +A +WLSGVLTNHVTCLD LD S TK M L EL++RA +LA+L +++ N V++ Sbjct: 1 MATPQQPLLTKTH-------KQNSIISFKILTFVVTLFVALFLVVFLVAPYQFEIKHSNLCKTAQDSQLCLSYVSDLISNEIVTSDSDGLSILKKFLVYSVHQMNNAIPVVRKIKNQINDIREQGALTDCLELLDLSVDLVCDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELD-SFTKAMINGTNLDELISRAKVALAMLASVTTPNDEVLR 209
BLAST of FC920537 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.008e-26 Identity = 80/217 (36.87%), Postives = 118/217 (54.38%), Query Frame = 1 Query: 10 MATIDRPLLLKLHTPKASKRKXXXXXXXXXXXMCSATFVAIHCIKAINSNNHWSLHQ--FCAKAQDQSSCIAMVSETTSIN-ATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSDEDAHAWLSGVLTNHVTCLDGLDGSATKLM--EPRLVELMARAANSLAILVAISPYNTNVIQ 645 MAT +PLL K H K FVA+ + + + + + C AQD C++ VS+ S TT + + +L+ FL + I V + +K++IN R + ALTDC+ELL+ SVD ++DS+AA+ KR S +A +WLSGVLTNHVTCLD LD S TK M L EL++RA +LA+L +++ N +V++ Sbjct: 1 MATPQQPLLTKTH-------KQNSIISFKILTFVVTLFVALFLVVFLVAPYQFEIKHSNLCKTAQDSQLCLSYVSDLMSNEIVTTDSDGLSILMKFLVNYVHQMNNAIPVVSKMKNQINDIRQEGALTDCLELLDQSVDLVSDSIAAIDKRTHSEHANAQSWLSGVLTNHVTCLDELD-SFTKAMINGTNLDELISRAKVALAMLASVTTPNDDVLR 209
BLAST of FC920537 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25 Identity = 66/156 (42.31%), Postives = 94/156 (60.26%), Query Frame = 1 Query: 184 CAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSDEDAHAWLSGVLTNHVTCLDGLDGSATKLMEPRLV-ELMARAANSLAILVAISPYNTNVIQQ 648 C AQD C++ VSE TT+ + V +L FL K + I V +K++IN R Q ALTDC+ELL+ SVD ++DS+AA+ KR S +A +WLSGVLTNHVTCLD L + ++ EL+ RA +LA+L +++ N V++Q Sbjct: 54 CKTAQDSQLCLSYVSEIV----TTESDGVTVLKKFLVKYVHQMNNAIPVVRKIKNQINDIRQQGALTDCLELLDQSVDLVSDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELTSFSLSTKNGTVLDELITRAKVALAMLASVTTPNDEVLRQ 205
BLAST of FC920537 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 7.410e-25 Identity = 71/213 (33.33%), Postives = 116/213 (54.46%), Query Frame = 1 Query: 10 MATIDRPLLLKLHTPKASKRKXXXXXXXXXXXMCSATFVAIHCIKAINSNNHWSL---HQFCAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALK--KRRTSSDEDAHAWLSGVLTNHVTCLDGLDG---SATKLMEPRLVELMARAANSLAILVAISP 624 M+ ++PLL K PK K K + S F I +NN SL Q C A DQ SC A++SE T+++ + K+N +DLL +FL S ++ T+ + + + R N R +A DC E++++S DR+ SM L+ S + H WLS VLTN++TCL+ + ++ ++++P+L +L++RA +LAI V++ P Sbjct: 1 MSNSNQPLLSK---PKYLKHKNLCLVLSFVAILGSVAFFTAQLISVNTNNNDDSLLTTSQICHGAHDQDSCQALLSEFTTLSLS-KLNRLDLLHVFLKNSVWRLESTMTMVSEARIRSNGVRDKAGFADCEEMMDVSKDRMMSSMEELRGGNYNLESYSNVHTWLSSVLTNYMTCLESISDVSVNSKQIVKPQLEDLVSRARVALAIFVSVLP 209
BLAST of FC920537 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5) HSP 1 Score: 111.694 bits (278), Expect = 3.678e-24 Identity = 79/213 (37.09%), Postives = 110/213 (51.64%), Query Frame = 1 Query: 10 MATIDRPLLLKLHTPKASKRKXXXXXXXXXXXMCSATFVAIHCIKAINSNNHWSLHQFCAKAQDQSSCIAMVSETTSIN-ATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSDEDAHAWLSGVLTNHVTCLDGLDGSATKLM--EPRLVELMARAANSLAILVAISPYNTNV 639 MA +PLL+K H K FVA+ + S C AQD C++ VS+ S TT+ + +L+ FL + I V +K++IN R ALTDC+ELL+ SVD +DS+AA+ KR S +A +WLSGVLTNHVTCLD LD S TK M L EL++RA +LA+L +++ + +V Sbjct: 1 MANPQQPLLIKTH-------KQNPIISFKILSFVITLFVALFLVAPYQVEIKHS--NLCKTAQDSQLCLSYVSDLISNEIVTTESDGHSILMKFLVNYVHQMNNAIPVVRKMKNQINDIRQHGALTDCLELLDQSVDFASDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELD-SFTKAMINGTNLEELISRAKVALAMLASLTTQDEDV 203 The following BLAST results are available for this feature:
BLAST of FC920537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920537 ID=FC920537; Name=FC920537; organism=Citrus clementina; type=EST; length=678bpback to top |