FC920538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAT (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=USA300HOU_0879 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 56/144 (38.89%), Postives = 89/144 (61.81%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRES 673 +I I+ ++V V ++G SE+++ +A VK++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+++GT F+ S++S A R++ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDA 257
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAE (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain Newman) GN=NWMN_0792 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 56/144 (38.89%), Postives = 89/144 (61.81%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRES 673 +I I+ ++V V ++G SE+++ +A VK++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+++GT F+ S++S A R++ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDA 257
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAC (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain COL) GN=SACOL0922 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 56/144 (38.89%), Postives = 89/144 (61.81%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRES 673 +I I+ ++V V ++G SE+++ +A VK++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+++GT F+ S++S A R++ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDA 257
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAA8 (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00855 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 56/144 (38.89%), Postives = 89/144 (61.81%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRES 673 +I I+ ++V V ++G SE+++ +A VK++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+++GT F+ S++S A R++ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDA 257
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAA3 (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0825 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 56/144 (38.89%), Postives = 89/144 (61.81%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRES 673 +I I+ ++V V ++G SE+++ +A VK++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+++GT F+ S++S A R++ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDA 257
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_NEUCR (2-nitropropane dioxygenase OS=Neurospora crassa GN=ncd-2 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20 Identity = 66/194 (34.02%), Postives = 103/194 (53.09%), Query Frame = 2 Query: 200 RKTRSLTERPF----GVGVVLAFPHNENIKAILSEKVAVL-----QVSW---------------GEYSEELVLEA-HSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQ-DGLISLLPMVVDLIG----DRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRESWLKWTN 691 R LT+RP G+GV L H ++ + + +L Q W + + + ++EA H++G V QVG+ +ARKA G D I+ QG +AGGH + G++SL+P V D++ +R++ ++AAGG+ D RG V AL LGA+G+ LGTRF + E+ + PE+R + TN Sbjct: 83 RSRLGLTDRPLTPLPGIGVGLILTHTISVPYVTDTVLPILIEHSPQAVWLFANDPDFEASSEPGAKGTAKQIIEALHASGFVVFFQVGTVKDARKAAADGADVIVAQGIDAGGHQLATGSGIVSLVPEVRDMLDREFKEREVVVVAAGGVADGRGVVGALGLGAEGVVLGTRFTVAVEA-STPEFRRKVILETN 275
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAS (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0791 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 55/144 (38.19%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRES 673 +I I+ ++V V ++G SE ++ A +K++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+++GT F+ S++S A R++ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPSESIIKRLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDA 257
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAR (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0883 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19 Identity = 54/144 (37.50%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRES 673 +I I+ ++V V ++G +E ++ A +K++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+++GT F+ S++S A R++ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPNESIIKRLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDA 257
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAN (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain N315) GN=SA0781 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19 Identity = 54/144 (37.50%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRES 673 +I I+ ++V V ++G +E ++ A +K++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+++GT F+ S++S A R++ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPNESIIERLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDA 257
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAA9 (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain JH9) GN=SaurJH9_0919 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19 Identity = 54/144 (37.50%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRES 673 +I I+ ++V V ++G +E ++ A +K++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+++GT F+ S++S A R++ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPNESIIERLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDA 257 The following BLAST results are available for this feature:
BLAST of FC920538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920538 ID=FC920538; Name=FC920538; organism=Citrus clementina; type=EST; length=709bpback to top |