FC920666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.900e-63 Identity = 128/204 (62.75%), Postives = 147/204 (72.06%), Query Frame = 3 Query: 87 AHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXAFHGVSLKFP---SRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 AH +L ++P +++ +L+ + NP +FHGVSLK L LS AA A+ KPLT LKGTS+VEGVVTLTQE+ GPTTVNV++TGLTPGPHGFHLHE+GDTTNGCISTG HFNPN THGAP+DE RHAGDLGNI+ANA+GVAEATIVDNQI L GPN VVGRAFVVHEL DDLGK G Sbjct: 3 AHCILFSSPAATT-SLIFPISNPNTAVSLPSS---------SFHGVSLKSTINRQSLTLSAAASAAPKPLTVFAATKKAVAVLKGTSSVEGVVTLTQEEDGPTTVNVKITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHELADDLGKGG 196
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 4.680e-62 Identity = 122/202 (60.40%), Postives = 145/202 (71.78%), Query Frame = 3 Query: 87 AHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXAFHGVSLKF-PSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 AH +L +AP ++ +L++ + +F+G+S K P+ +LSL+ A+ KPLT LKGTSNVEGVVTLTQED GPTTVNVR++GL PG HGFHLHE+GDTTNGC+STG HFNP+ THGAP+DEVRHAGDLGNIVAN +GVAEATIVDNQI L GPN+VVGRA VVHELEDDLGK G Sbjct: 3 AHTILASAPSHTTFSLISPFSSTPTNALSSSLQSS------SFNGLSFKLSPTTQSLSLSTSAASKPLTIVAATKKAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGG 198
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODCP_PEA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum GN=SODCP PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.112e-62 Identity = 127/202 (62.87%), Postives = 141/202 (69.80%), Query Frame = 3 Query: 84 MAHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXAFHGVSLKFPSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 MA LV+ P SSH+LL T +F GVS+K + S A ++ KPLT LKGTS VEGVVTLTQ+D GPTTVNVR+TGLTPG HGFHLHEYGDTTNGCISTG HFNPN +THGAP+DE+RHAGDLGNIVANA GVAEATIVDNQI L GPN+VVGRA VVHEL+DDLGK G Sbjct: 1 MASQTLVSPSPLSSHSLLRT----------------------SFSGVSVKLAPQF--STLATSNFKPLTVVAAAKKAVSVLKGTSAVEGVVTLTQDDEGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGG 178
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.962e-61 Identity = 116/162 (71.60%), Postives = 130/162 (80.25%), Query Frame = 3 Query: 210 AFHGVSLKFPSRL--NLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 +FHGVSLK S+ +L+L++V S KP LKGTSNVEGVVTLTQ+D GPTTV VR+TGL PG HGFHLHE+GDTTNGC+STG HFNPN +THGAP DEVRHAGDLGNI ANA+GVAEAT+VDNQI L GPN+VVGRA VVHELEDDLGK G Sbjct: 34 SFHGVSLKVKSKTPQSLTLSSVTSPKPFIVFAATKKAVAVLKGTSNVEGVVTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTNGCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHELEDDLGKGG 195
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 1.153e-60 Identity = 119/163 (73.01%), Postives = 131/163 (80.37%), Query Frame = 3 Query: 210 AFHGVSLKFPS--RL-NLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 +F GVSL + RL ++S A A K LT LKGTS+VEGVVTLTQ+D GPTTVNVR+TGLTPGPHGFHLHE+GDTTNGCISTG HFNPNNMTHGAP+DE RHAGDLGNI ANA+GVAE TIVDNQI L GPN+VVGRAFVVHEL+DDLGK G Sbjct: 30 SFRGVSLNNNNLHRLQSVSFAVKAPSKALTVVSAAKKAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGG 192
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.505e-60 Identity = 117/188 (62.23%), Postives = 135/188 (71.81%), Query Frame = 3 Query: 126 HTLLATLPNPXXXXXXXXXXXXXXXXXXAFHGVSLKFPSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 +TLL+T P+ FHG+SLK + S+ + KPL+ LKGTS+VEGVVTL+QED GPTTV+VR+TGLTPG HGFHLHE+GDTTNGC+STGAHFNPN MTHGAP+D+VRHAGDLGNI+ANA GVAEATIVD QI L GPN V+GRA VVHELEDDLGK G Sbjct: 4 NTLLSTAPSRVFLSFPNPSPNPSPQLHSQFHGLSLKLTRQ---SIPLATAPKPLSVVAVTKKAVAVLKGTSSVEGVVTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVHELEDDLGKGG 188
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.966e-60 Identity = 115/162 (70.99%), Postives = 130/162 (80.25%), Query Frame = 3 Query: 210 AFHGVSLKFPSRL--NLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 +F GVSL ++ +L+L AV + KPLT LKG SNVEGVVTL+Q+D GPTTVNVR+TGL PG HGFHLHEYGDTTNGC+STGAHFNPN +THGAP DE+RHAGDLGNIVANA+GVAE T+VDNQI L GPN+VVGRA VVHELEDDLGK G Sbjct: 32 SFLGVSLNVNAKFGQSLTLYAVTTPKPLTVFAATKKAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGG 193
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.843e-59 Identity = 113/149 (75.84%), Postives = 120/149 (80.54%), Query Frame = 3 Query: 243 RLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 RL A A+ + L LKGTS VEGVVTLTQ+D GPTTVNVRVTGLTPG HGFHLHE+GDTTNGCISTG HFNPNN+THGAP+DEVRHAGDLGNIVANA GVAEATIVD QI L GPN+VVGRAFVVHELEDDLGK G Sbjct: 39 RLAAGPAGAAAARALVVADATKKAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGG 187
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.133e-58 Identity = 118/202 (58.42%), Postives = 139/202 (68.81%), Query Frame = 3 Query: 84 MAHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXAFHGVSLKFPSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 MA L++ P +SH+LL + +F GVS+K + S + + +PL+ LKG S VEGVVTLTQE+ PTTVNVR+TGLTPG HGFHLHEYGDTTNGCISTG HFNPN +THGAP+DE+RHAGDLGNI+A+ANGVAEATIVDNQI L GPN+V+GRA VVHELEDDLGK G Sbjct: 1 MASHSLMSPSPLTSHSLLRS----------------------SFSGVSVKLSPQF--STLSRSKFQPLSVVAAAKKAVAVLKGNSTVEGVVTLTQENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKGG 178
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.731e-57 Identity = 107/145 (73.79%), Postives = 118/145 (81.38%), Query Frame = 3 Query: 255 SLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 S+AA AS + + LKGTS V+GVVTL QED GPTTVNVR+TGLTPG HGFHLHEYGDTTNGCISTG+HFNPN +THGAP D VRHAGDLGNIVAN +G+AEATIVD+QI L G N+VVGRAFVVHELEDDLGK G Sbjct: 48 SIAAAASPRSMVVVAATKKAVAVLKGTSQVDGVVTLVQEDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKGG 192 The following BLAST results are available for this feature:
BLAST of FC920666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920666 ID=FC920666; Name=FC920666; organism=Citrus clementina; type=EST; length=700bpback to top |