FC920719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920719 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.600e-40 Identity = 88/177 (49.72%), Postives = 118/177 (66.67%), Query Frame = 3 Query: 141 ENMDRVEIDRERLTAEMAFKEDSSAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNFATIIMFVLIVPLSIATVIQLSGLKLDRILELLSKEKLQLNMIIDAASDQLAVSTMLFFLFGLYWSKRSSPVYLVDFSCYKPADERKMSMEAFLKMXXXXXXXXXXXXXXXKRIASRASVGDE 671 E + +E+DRERLTAEMAF++ SSAVI+IR+RLPD L SVKLKYVKLG SCN TI+ F++I+PL+ ++QL+GL D EL S + +QL+ + +L L F+ LY + RS PVYLVDFSCYKP DERK+S+++FL M +RI++RA +GDE Sbjct: 2 ERTNSIEMDRERLTAEMAFRDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNVTTILFFLIILPLTGTVLVQLTGLTFDTFSELWSNQAVQLD-----TATRLTCLVFLSFVLTLYVANRSKPVYLVDFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDE 173
BLAST of FC920719 vs. ExPASy Swiss-Prot
Match: KCS10_ARATH (3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.364e-15 Identity = 50/155 (32.26%), Postives = 77/155 (49.68%), Query Frame = 3 Query: 219 IKIRQRLPDFLQSVKLKYVKLGYGYSCN----FATIIMFVLIVPLSIATVIQLSGLKLDRILELLSKEKLQLNMIIDAASDQLAVSTMLFFLFGLYWSKRSSPVYLVDFSCYKPADERKMSMEAFLKMXXXXXXXXXXXXXXXKRIASRASVGDE 671 +++R+RLPDFLQSV LKYVKLGY Y N ATI + VL+ + + LS+E++ + + + + +Y+ R VYL+DF+CYKP+DE K++ E F+++ KRI + +GDE Sbjct: 33 VRVRRRLPDFLQSVNLKYVKLGYHYLINHAVYLATIPVLVLVFSAEVGS---------------LSREEIWKKLWDYDLATVIGFFGVFVLTACVYFMSRPRSVYLIDFACYKPSDEHKVTKEEFIELARKSGKFDEETLGFKKRILQASGIGDE 172
BLAST of FC920719 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.154e-14 Identity = 50/146 (34.25%), Postives = 75/146 (51.37%), Query Frame = 3 Query: 231 QRLPDFLQSVKLKYVKLGYGYSCNFATIIMFVLIVPLSIATVIQLSGLKLDRILELLSKEKLQLNMIIDAASDQLAVSTMLFFLFGLYWSKRSSPVYLVDFSCYKPADERKMSMEAFLKMXXXXXXXXXXXXXXXKRIASRASVGD 668 + LPDF +SVKLKYVKLGY Y T M++ + PL + Q+S + + L E LQ N+I + S +L FL +Y+ R PVYLV+FSC+KP + RK + + F+ ++I R+ +G+ Sbjct: 15 RNLPDFKKSVKLKYVKLGYHY---LITHGMYLFLSPLVLVIAAQISTFSVTDLRSLW--EHLQYNLI-----SVVVCSMLLVFLMTIYFMTRPRPVYLVNFSCFKPDESRKCTKKIFMDRSKLTGSFTEENLEFQRKILQRSGLGE 150
BLAST of FC920719 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.358e-14 Identity = 55/159 (34.59%), Postives = 79/159 (49.69%), Query Frame = 3 Query: 204 DSSAVIKIRQR--LPDFLQSVKLKYVKLGYGY-SCNFATIIMFVLIVPLSIATVIQLSGLKLDRILELLSKEKLQLNMIIDAASDQLAVSTMLFFLFGLYWSKRSSPVYLVDFSCYKPADERKMSMEAFLKMXXXXXXXXXXXXXXXKRIASRASVGDE 671 D S ++IRQ LPDFLQSV LKYVKLGY Y N T+ +F PL++ ++ S + D + +L LQ N++ + S +L F +Y R PVYLVDFSCY P D K F++ ++I R+ +G++ Sbjct: 16 DGSVGVQIRQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCLF----PLAVVISVEASQMNPDDLKQLWI--HLQYNLV-----SIIICSAILVFGLTVYVMTRPRPVYLVDFSCYLPPDHLKAPYARFMEHSRLTGDFDDSALEFQRKILERSGLGED 163
BLAST of FC920719 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.195e-11 Identity = 45/148 (30.41%), Postives = 74/148 (50.00%), Query Frame = 3 Query: 228 RQRLPDFLQSVKLKYVKLGYGYSCNFATIIMFVLIVPLSIATVIQLSGLKLDRILELLSKEKLQLNMIIDAASDQLAVSTMLFFLFGLYWSKRSSPVYLVDFSCYKPADERKMSMEAFLKMXXXXXXXXXXXXXXXKRIASRASVGDE 671 R++LP+FLQSV +KYVKLGY Y T + + +VPL V ++S L D + ++ LQ N++ + +S + F +Y R VYLVD+SCY P + ++ + F+ ++I R+ +G+E Sbjct: 22 RRKLPNFLQSVNMKYVKLGYHY---LITHLFKLCLVPLMAVLVTEISRLTTDDLYQIWL--HLQYNLVA-----FIFLSALAIFGSTVYIMSRPRSVYLVDYSCYLPPESLQVKYQKFMDHSKLIEDFNESSLEFQRKILERSGLGEE 159
BLAST of FC920719 vs. ExPASy Swiss-Prot
Match: KCS5_ARATH (3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 46/146 (31.51%), Postives = 72/146 (49.32%), Query Frame = 3 Query: 237 LPDFLQSVKLKYVKLGYGYSC-NFATIIMFVLIVPLSIATVIQLSGLKLDRILELLSKEKLQLNMIIDAASDQLAVSTMLFFLFGLYWSKRSSPVYLVDFSCYKPADERKMSMEAFLKMXXXXXXXXXXXXXXXKRIASRASVGDE 671 + DF SVKLKYVKLGY Y NF T+ L++P+ I+L + + IL +L+ +L I L S ++ F+ +Y+ + VYLVD+SCYKP ++ +F++ RI R+ +G+E Sbjct: 1 MSDFSSSVKLKYVKLGYQYLINNFLTL----LLIPVIATVAIELLRMGPEEILSVLNSLHFELLHI-------LCSSFLIIFVSTVYFMSKPRTVYLVDYSCYKPPVTCRVPFSSFMEHSRLILKDNPKSVEFQMRILERSGLGEE 135 The following BLAST results are available for this feature:
BLAST of FC920719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920719 ID=FC920719; Name=FC920719; organism=Citrus clementina; type=EST; length=672bpback to top |