FC920754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920754 vs. ExPASy Swiss-Prot
Match: ALG13_HUMAN (UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo sapiens GN=ALG13 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.147e-21 Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 3 Query: 327 RIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQ 656 + VFVTVGTT FD L+ V + Q++ GY L++Q+GRGT VP E +D + + S+ + ++ A LVISHAG+GS ETL GKPL+VV+NE LM+NHQ Sbjct: 2 KCVFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTES--FTLDVYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQ 109
BLAST of FC920754 vs. ExPASy Swiss-Prot
Match: ALG13_MOUSE (UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus musculus GN=Alg13 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.957e-21 Identity = 55/107 (51.40%), Postives = 69/107 (64.49%), Query Frame = 3 Query: 336 FVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQ 656 FVTVGTT FD LV V + Q L GY HL++Q+GRGT VP E +D + + S+ + L+ A LVISHAG+GS E+L GKPL+VVVNE LM+NHQ Sbjct: 5 FVTVGTTSFDELVARVVANDCVQILESLGYNHLVLQVGRGTVVPKPFRTES--FTLDVYRYKDSLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKLMNNHQ 109
BLAST of FC920754 vs. ExPASy Swiss-Prot
Match: ALG13_RAT (UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Rattus norvegicus GN=Alg13 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21 Identity = 55/107 (51.40%), Postives = 69/107 (64.49%), Query Frame = 3 Query: 336 FVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQ 656 FVTVGTT FD LV V + Q L GY HL++Q+GRGT VP E +D + + S+ + L+ A LVISHAG+GS E+L GKPL+VVVNE LM+NHQ Sbjct: 5 FVTVGTTSFDDLVARVVANDTVQILKSLGYNHLVLQIGRGTVVPEPFSTEP--FTLDVYRYKESLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKLMNNHQ 109
BLAST of FC920754 vs. ExPASy Swiss-Prot
Match: ALG13_SCHPO (UDP-N-acetylglucosamine transferase subunit alg13 OS=Schizosaccharomyces pombe GN=alg13 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.819e-17 Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 3 Query: 336 FVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRG--TYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQ 656 FVTVG+T FD L++AV E + L + G L++Q G+G + KS+ ++ DY + I ++ AS+VISHAG+GSI +TLR GK L+VV NE LMDNHQ Sbjct: 4 FVTVGSTQFDDLIRAVLKPEFQHCLVKHGINQLIVQYGKGKQAFGDPKSVAGLTILGFDY---APEIESYIHDASIVISHAGAGSILQTLRSGKRLLVVPNESLMDNHQ 109
BLAST of FC920754 vs. ExPASy Swiss-Prot
Match: ALG13_YARLI (UDP-N-acetylglucosamine transferase subunit ALG13 OS=Yarrowia lipolytica GN=ALG13 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14 Identity = 42/109 (38.53%), Postives = 67/109 (61.47%), Query Frame = 3 Query: 330 IVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQ 656 ++ T GT F+AL++ V + E L++ G++ + +Q GRG ++G+M++ F ++ +A + A LVISHAG+GS+ + LR GK +VVVN LMDNHQ Sbjct: 30 VLVTTGGTVPFEALIELVLSHESITTLSQLGFSKMRVQYGRGNRHIFTKHHKEGVMSITGFEYTDDLAGEMSRAHLVISHAGTGSVLDALRIGKHPVVVVNSKLMDNHQ 138
BLAST of FC920754 vs. ExPASy Swiss-Prot
Match: ALG13_ASPFU (UDP-N-acetylglucosamine transferase subunit alg13 OS=Aspergillus fumigatus GN=alg13 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.370e-13 Identity = 52/154 (33.77%), Postives = 70/154 (45.45%), Query Frame = 3 Query: 327 RIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYV-------------PTKSLGEDGLMAVDY-----FTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSXXXXXXXXXXXXYCAHPQSLHQVI 731 ++ FVTVG T F+ LV+A L GY+HLL+Q G+ + P + + G ++ F + + RS LVISHAGSG+I E LR G PLIVV N L DNHQ +H Q+L Q + Sbjct: 5 KVCFVTVGATASFEELVRAALDPSFVTALEENGYSHLLVQYGKNAVIYENFLKQYPPERRPWRRINISGFSFHEHGLGGDFALAQADISKGRSGGLVISHAGSGTILEVLRMGIPLIVVPNPSLQDNHQEELARQLQKQGYVVASHYQNLCQAL 158 The following BLAST results are available for this feature:
BLAST of FC920754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920754 ID=FC920754; Name=FC920754; organism=Citrus clementina; type=EST; length=734bpback to top |