FC920979
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920979 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.317e-44 Identity = 103/189 (54.50%), Postives = 129/189 (68.25%), Query Frame = 1 Query: 124 SVVAARVTGIR-KSGVYQFSSVK--YLPGTLQRNVSLSVRCMAKNEQQKDQ-----------STQPP-----KLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDVELWNGRFAMMGLVALAVTEFVKGSTL 633 S+++ +T I +S V QF+++ Y+P TL+RNVSL VR MA+ E ++ ST P + P++STKFSD+ AFSGPAPERINGRLAMIGFVAA+ VE++KGQ + QLS GGVAWFLGT P F+GVSVESKS M+SD E WNGR AM+GLVALA TEFVKG++L Sbjct: 8 SIMSNSMTNISSRSRVNQFTNIPSVYIP-TLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSL 195
BLAST of FC920979 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.895e-33 Identity = 77/156 (49.36%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 205 LQRNVSLSVRCMAKN------EQQKDQSTQP------PKLPRISTKFS-DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDVELWNGRFAMMGLVALAVTEFVKGSTL 633 ++RN +VR M ++ +QQK Q T P ++TK + D+F+F G APERINGR AMIGFVAA+ VEL+ G+DVF+Q+ +GGV WFL T P+++G+S E+K++GF SD E+WNGRFAM+GLVALA TE+VKG L Sbjct: 41 MRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPL 196
BLAST of FC920979 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.271e-29 Identity = 77/182 (42.31%), Postives = 100/182 (54.95%), Query Frame = 1 Query: 85 MAASLATQSMLGSSVVAARVTGIRKSGVYQFSSVKYLPGTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDVELWNGRFAMMGLVALAVTEFVKGS 627 MA ++ S G++VV +S F + + LP +L R + Q + S PP P+ ST D AFSGPAPERINGRLAM+GFV ALAVE +G + +QL G G AWF T PL +G S E ++ M ++ ELWNGRFAM+GLVALA TE + G+ Sbjct: 1 MATMMSMSSFAGAAVVP-------RSSASSFGA-RSLP-------ALGRRALVVRAQTEGPSAPPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGA 167
BLAST of FC920979 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.271e-29 Identity = 70/153 (45.75%), Postives = 90/153 (58.82%), Query Frame = 1 Query: 175 FSSVKYLP-GTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDVELWNGRFAMMGLVALAVTEFVKGS 627 F+ LP G+ + +L R + Q + + PP P+ ST D AFSGPAPERINGRLAM+GFV ALAVE +G + +QL G G AWF T PL +G S E ++ M ++ ELWNGRFAM+GLVALA TE + G+ Sbjct: 10 FAGAAVLPRGSARSLPALGRRTLVVRAQTEGPNAPPPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITGT 162
BLAST of FC920979 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.398e-28 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 271 TQPPKLPRISTKFS-----DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLS--DGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDVELWNGRFAMMGLVALAVTEFVKGS 627 T P P+ TK + D AFSGPAPERINGRLAM+GFVAAL+VE ++G + Q+ G+AWFL T PL +G SVESKS G ++D ELWNGRFAM+GLVALA TEF+ G+ Sbjct: 101 TTIPAAPKPVTKKANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGA 226
BLAST of FC920979 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-14 Identity = 60/162 (37.04%), Postives = 75/162 (46.30%), Query Frame = 1 Query: 178 SSVKYLPGTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPR--------ISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSD--GFMTSDVELWNGRFAMMGLVALAVTEFVKGSTL 633 +S+ P L R + C + + ST PP P + ++V FSG APE INGRLAM+GFVAAL ELS G+ V QL D L T P F K D G T D E+ NGRFAM+G A+ V E ++G L Sbjct: 16 ASINVRPAPLLRTAAPKRVCKHIVRAENNPSTPPPSSPSPPPPPPTPAAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAF----ARRKGDAMGPFTPDAEMTNGRFAMIGFAAMLVYEGIQGIAL 171 The following BLAST results are available for this feature:
BLAST of FC920979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920979 ID=FC920979; Name=FC920979; organism=Citrus clementina; type=EST; length=782bpback to top |