FC921387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921387 vs. ExPASy Swiss-Prot
Match: UBP21_ARATH (Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis thaliana GN=UBP21 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 55/93 (59.14%), Postives = 69/93 (74.19%), Query Frame = 2 Query: 374 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFF 652 W +I+PTGVGAGL N GNTCFI ++LQCFTHT+PL+ +LRSF + PC+ E FCV+ ALRDHIEL+L SSG ++ + DNL Y SS F Sbjct: 152 WYPRIEPTGVGAGLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHIELALRSSGYGINIDRFRDNLTYFSSDF 244
BLAST of FC921387 vs. ExPASy Swiss-Prot
Match: UBP20_ARATH (Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis thaliana GN=UBP20 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.622e-22 Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 2 Query: 395 TGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQ 655 TGVGAGL NLGN+CF+N++ QCFTHT+PL+++L SF + PC E FCVI A+R HIE +L ++P DNLNY S FQ Sbjct: 172 TGVGAGLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGNEFFCVIRAIRYHIEAALRPERCPIAPYFFFDNLNYFSPDFQ 258 HSP 2 Score: 28.4906 bits (62), Expect = 1.622e-22 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 649 FSRYQQEDAHEF 684 F RYQQEDAHEF Sbjct: 257 FQRYQQEDAHEF 268
BLAST of FC921387 vs. ExPASy Swiss-Prot
Match: UBP23_ARATH (Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana GN=UBP23 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 2 Query: 341 SSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQ 655 S LL E I +GAGL+NLGNTCF+N++LQC T+T PL L++ H + C A GFC +CA++ H+ + ++G++L+P+ LV NL IS F+ Sbjct: 85 SDLLEHGFEPDLTFSITFRKIGAGLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVA--GFCALCAIQKHVRTARQANGRILAPKDLVSNLRCISRNFR 187
BLAST of FC921387 vs. ExPASy Swiss-Prot
Match: UBP42_HUMAN (Ubiquitin carboxyl-terminal hydrolase 42 OS=Homo sapiens GN=USP42 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 37/85 (43.53%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 401 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQ 655 VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +L++ G V+ P +++ + I+ F+ Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFR 191
BLAST of FC921387 vs. ExPASy Swiss-Prot
Match: UBP36_HUMAN (Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 401 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQ 655 VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI + A+SG + P + +L I+ F+ Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQAFANSGNAIKPVSFIRDLKKIARHFR 202
BLAST of FC921387 vs. ExPASy Swiss-Prot
Match: UBP36_MOUSE (Ubiquitin carboxyl-terminal hydrolase 36 OS=Mus musculus GN=Usp36 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 401 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQ 655 VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC++C +++H+ + A+SG + P + +L I+ F+ Sbjct: 120 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQG--GFCMLCLMQNHMVQAFANSGNAIKPVSFIRDLKKIARHFR 202
BLAST of FC921387 vs. ExPASy Swiss-Prot
Match: U17L8_HUMAN (Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8 OS=Homo sapiens GN=USP17L8 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.026e-12 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 389 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSP 610 +P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ HI +L S G V+ P Sbjct: 74 RPAAVGAGLQNMGNTCYLNASLQCLTYTPPLANYMLSREHSQTCQ--RPKCCMLCTMQAHITWALHSPGHVIQP 145 HSP 2 Score: 22.7126 bits (47), Expect = 1.026e-12 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 649 FSRYQQEDAHEF 684 F R +QEDAHEF Sbjct: 153 FHRGKQEDAHEF 164
BLAST of FC921387 vs. ExPASy Swiss-Prot
Match: U17L4_HUMAN (Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4 OS=Homo sapiens GN=USP17L4 PE=3 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 1.730e-12 Identity = 33/74 (44.59%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 389 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSP 610 +P VGAGL+N+GNTC+ NA LQC T+TLPL + S +H + C C++C ++ HI +L S G V+ P Sbjct: 74 RPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQ--RPKCCMLCTMQAHITWALHSPGHVIQP 145 HSP 2 Score: 21.1718 bits (43), Expect = 1.730e-12 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 649 FSRYQQEDAHEF 684 F R +QED HEF Sbjct: 153 FHRGKQEDVHEF 164
BLAST of FC921387 vs. ExPASy Swiss-Prot
Match: U17L3_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17-like protein 3 OS=Homo sapiens GN=USP17L3 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.730e-12 Identity = 33/74 (44.59%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 389 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSP 610 +P VGAGL+N+GNTC+ NA LQC T+TLPL + S +H + C C++C ++ HI +L S G V+ P Sbjct: 74 RPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQ--RPKCCMLCTMQAHITWALHSPGHVIQP 145 HSP 2 Score: 21.1718 bits (43), Expect = 1.730e-12 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 649 FSRYQQEDAHEF 684 F R +QED HEF Sbjct: 153 FHRGKQEDVHEF 164
BLAST of FC921387 vs. ExPASy Swiss-Prot
Match: U17L1_HUMAN (Putative ubiquitin carboxyl-terminal hydrolase 17-like protein 1 OS=Homo sapiens GN=USP17L1P PE=5 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.730e-12 Identity = 33/74 (44.59%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 389 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSP 610 +P VGAGL+N+GNTC+ NA LQC T+TLPL + S +H + C C++C ++ HI +L S G V+ P Sbjct: 74 RPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQ--RPKCCMLCTMQAHITWALHSPGHVIQP 145 HSP 2 Score: 21.1718 bits (43), Expect = 1.730e-12 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 649 FSRYQQEDAHEF 684 F R +QED HEF Sbjct: 153 FHRGKQEDVHEF 164 The following BLAST results are available for this feature:
BLAST of FC921387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921387 ID=FC921387; Name=FC921387; organism=Citrus clementina; type=EST; length=707bpback to top |