FC921462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921462 vs. ExPASy Swiss-Prot
Match: PSF1_DICDI (Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum GN=gins1 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18 Identity = 63/185 (34.05%), Postives = 98/185 (52.97%), Query Frame = 3 Query: 162 MHGRLGSRLVKELASGEKGQLTHFNDELLNEVIKECSENFLAL-QSLIRKMQEEGLDFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSKVDLNLN-DMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKR 710 M + L+KEL + + H+ND + I E +AL + LI+ + E + H A+ H S+ R+KRC++AY+ R I+ W+ G L LP++++E+LS E +F + L Y SKV L+L D PPK+ YI+VRV+ +LGE ++ S N ++ HFLKR Sbjct: 1 MFTKTAIELIKELRGTDS--IPHYNDTSIKATIDE----MIALYEDLIKTITEHKEQKKEPFYLQH--AITFHNSINRDKRCILAYLNERLNRIKEYRWSSGQSL--LPDQLKERLSQNEIQFFSEYDKILTEYNSKVGLDLTIDPQPPKELYIEVRVIKELGEVVLNSGCTVNLNLNTTHFLKR 175
BLAST of FC921462 vs. ExPASy Swiss-Prot
Match: PSF1_BOVIN (DNA replication complex GINS protein PSF1 OS=Bos taurus GN=GINS1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.365e-17 Identity = 60/181 (33.15%), Postives = 97/181 (53.59%), Query Frame = 3 Query: 186 LVKELASGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGAL-INHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSKV--DLNLN---DMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKR 710 LV+EL +G+L FN++ L +V++E +++L + Q + + +++ D + H SL+RN+RC +AY+Y+R I+ L W G LP ++ +S E D+F R+ +L +YM + D L+ DM PPK YI+VR L D GE V + ++S HFL R Sbjct: 9 LVRELHRAAEGRLPAFNEDGLRQVLEE-------MKALYEQNQSDVNEAKSSGRGDLIPTIKFRHCSLLRNQRCTVAYLYDRLLRIRALRWEYG---SVLPSALRFHMSAEEMDWFNRYKKSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGEFEVEDGTSVLLKKNSQHFLPR 179
BLAST of FC921462 vs. ExPASy Swiss-Prot
Match: PSF1_HUMAN (DNA replication complex GINS protein PSF1 OS=Homo sapiens GN=GINS1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.200e-15 Identity = 57/181 (31.49%), Postives = 96/181 (53.04%), Query Frame = 3 Query: 186 LVKELASGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGAL-INHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSKV--DLNLN---DMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKR 710 L++EL +GQL FN++ L +V++E +++L + Q + + ++ +D + H SL+RN+RC +AY+Y+R I+ L W G LP ++ ++ E ++F + +L +YM + D L+ DM PPK YI+VR L D GE V + ++S HFL R Sbjct: 9 LIRELHRAPEGQLPAFNEDGLRQVLEE-------MKALYEQNQSDVNEAKSGGRSDLIPTIKFRHCSLLRNRRCTVAYLYDRLLRIRALRWEYG---SVLPNALRFHMAAEEMEWFNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGEFEVDDGTSVLLKKNSQHFLPR 179
BLAST of FC921462 vs. ExPASy Swiss-Prot
Match: PSF1_MOUSE (DNA replication complex GINS protein PSF1 OS=Mus musculus GN=Gins1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.047e-15 Identity = 59/181 (32.60%), Postives = 92/181 (50.83%), Query Frame = 3 Query: 186 LVKELASGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGL-DFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSKV--DLNLN---DMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKR 710 LV+EL +GQL FN++ L +V++E + QS + + + G D T H +L+RN+RC +AY+Y+R I+ L W G LP ++ +S E ++F + +L +YM + D L+ D+ PPK YI+VR L D GE V + ++S HFL R Sbjct: 9 LVRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSAGRGDLIPT-------VKFRHCALLRNRRCTIAYLYDRLLRIRALRWEYG---SVLPNSLRFHMSAEETEWFNHYKKSLATYMRSLGGDEGLDITQDVKPPKSLYIEVRCLKDYGEFEVDDGTSVLLKKNSQHFLPR 179
BLAST of FC921462 vs. ExPASy Swiss-Prot
Match: PSF1_CHAGB (DNA replication complex GINS protein PSF1 OS=Chaetomium globosum GN=PSF1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14 Identity = 62/201 (30.85%), Postives = 100/201 (49.75%), Query Frame = 3 Query: 162 MHGRLGSRLVKELASGEKGQLTH---FNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEE-------------IQEKLSHLEKDYFKRHSAALESYMSK-VDLNL-NDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKR 710 M+G LG++LV+ + LTH + EL+ V +E + + SL+ Q G +T A L+NHLS+ RNKRCL+AY R + ++ L W G + +L + LS E+DYF+++ L +Y + D++L + PP+D +I VRVL D GE I A N ++S ++++ Sbjct: 3 MYGDLGNKLVQHAKRTQN--LTHLPPYQTELVRAVTREVRDLDKDVASLLEPFQ--GSFDPSTDQATACTLLVNHLSMRRNKRCLLAYHRTRTDKLEELVWN-GSDVLDLAGQQAGGVNGAAADSGAGSSLSPQEEDYFRQYGDLLSAYKGQWTDIDLTGSLEPPRDLFIDVRVLKDAGE-IQTEYGAINLTKNSQFYVRQ 197
BLAST of FC921462 vs. ExPASy Swiss-Prot
Match: PSF1_NEUCR (DNA replication complex GINS protein psf-1 OS=Neurospora crassa GN=psf-1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13 Identity = 61/202 (30.20%), Postives = 98/202 (48.51%), Query Frame = 3 Query: 162 MHGRLGSRLVKELASGEK-GQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFEL-------PEEIQE---------KLSHLEKDYFKRHSAALESYMSK-VDLNL-NDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKR 710 M+G LG++LV+ + L + EL+ V +E + + SL+ Q G + A L+NHLS+ RNKRCL+AY R + ++ L W G + +L P+ + E LS E+DYF++ L Y + D++L + PP+D +I VRVL D GE I A N ++S ++++ Sbjct: 3 MYGDLGNKLVQHAKRTQNLSHLPPYQTELVRAVAREIRDLDKDVASLLEPFQ--GSFDPSAEQATACTLLVNHLSMRRNKRCLLAYHRIRTDKLEELVWN-GADILDLAGQTTGGPKGVTEGNEGGGTTSSLSPQEEDYFRQFGDLLALYKGQWTDIDLTGSLEPPRDLFIDVRVLKDAGE-IQTEYGAINLTKNSQFYVRQ 200
BLAST of FC921462 vs. ExPASy Swiss-Prot
Match: PSF1_YEAST (DNA replication complex GINS protein PSF1 OS=Saccharomyces cerevisiae GN=PSF1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.614e-12 Identity = 57/198 (28.79%), Postives = 98/198 (49.49%), Query Frame = 3 Query: 162 MHGRLGSRLVKELA--------SGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAW-TVGLRLFE---LPEEIQEKLSHLEKDYFKRHSAALESYMS--KVDLNLN-DMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKR 710 M+G LG++LV E S + L ++++++ ++KE S N +++ Q+ G+ ++ L L + RNKRCL+AY R +++ ++AW GL L ++ LSH E++Y K + + S VD++L+ +VPP D +I VRVL D GE I N + S F+++ Sbjct: 1 MYGDLGNKLVLEAKRTKQLYARSNQDVNLPMYHEDIIRNILKEVS-NLRKNTEYLKEQQQLGMLDDKVAKCQYFVTL---LCMERNKRCLLAYQRLRTDILDSMAWNNNGLDLMSSITFSQQDTNNLSHQEQEYLKEYCDLITDLKSGDLVDIDLSGSLVPPSDVFIDVRVLKDAGE-IQTEYGVFNLIKDSQFFVRQ 193
BLAST of FC921462 vs. ExPASy Swiss-Prot
Match: PSF1_SCHPO (DNA replication complex GINS protein psf1 OS=Schizosaccharomyces pombe GN=psf1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 55/171 (32.16%), Postives = 85/171 (49.71%), Query Frame = 3 Query: 162 MHGRLGSRLVKELASGEKGQ----LTHFNDELLNEVIKEC-SENFLALQSLIRKMQEEGLDFQTTRNADHYGALIN-HLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESY---MSKVDLNLNDMVPPKDPYIKVRVLDDLGE 647 M LG+R K + ++ Q L + + +N+V+ E + + +L L E FQ + AL+ H S I NKRCLMAY R + ++ W+ G R+ + LS E+DY R+S L +Y S++DL +VPPK+ +I VRVL D+G+ Sbjct: 1 MENGLGNRSNKLIRDSKRTQYLDYLPPYQADTVNDVVNEIRAADRESLGILQNVTHEASQPFQPQDHPSEAAALLMFHSSSIYNKRCLMAYHNLRLQRLRQYCWSGGKRMESC---LDTSLSTYERDYLTRYSELLAAYKGAWSELDLT-GSLVPPKNLFIDVRVLKDVGD 167
BLAST of FC921462 vs. ExPASy Swiss-Prot
Match: PSF1_KLULA (DNA replication complex GINS protein PSF1 OS=Kluyveromyces lactis GN=PSF1 PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 59/203 (29.06%), Postives = 96/203 (47.29%), Query Frame = 3 Query: 162 MHGRLGSRLVKEL--------ASGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLF--------ELPEEIQEKLSHLEKDYFKRHSAAL----ESYMSKVDLNLNDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKR 710 M+G L ++L+ E A K QL + DEL+ ++KE +L+ + ++E+ L Q + A ++ LS+ RNKRCL+AY R+EM+ ++ W F L LSH E++Y K ++ L +S++DL + PP D +I VRVL D G+ I N + S F+++ Sbjct: 1 MYGDLANKLILEAKRTQQLSQAGFNKQQLPVYQDELVRGILKEVG----SLKKNVDYLREQQLTDQDNKVAQCQ-YVVAMLSMERNKRCLLAYQKMRSEMLDSMVWDNNGMEFSSAISNHPNLSSFDSSVLSHAEQEYLKEYAQLLTELKSGELSEIDLT-GMLQPPSDVFIDVRVLKDAGQ-IETEYGVFNLIKDSQFFVRQ 196 The following BLAST results are available for this feature:
BLAST of FC921462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921462 ID=FC921462; Name=FC921462; organism=Citrus clementina; type=EST; length=726bpback to top |