FC921481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 2.656e-82 Identity = 157/230 (68.26%), Postives = 172/230 (74.78%), Query Frame = 1 Query: 85 MASMVSTNCAQFSGLRRSSPT---------QSFSQHVNXXXXXXXXXXXXXXXX--VVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPXWDNVVIAYEPVWAI 741 MA+ T FSGLRR SP QSF VN VVAMA S KFFVGGNWKCNGTK+SI KL+SDLN A LE FVYIDQVK+SLTDRI+I+ QNSWVGKGGAFTGEISVEQLKD+GCKWV+LGHSERRHVIGE D+FIGKKAAYALSEGLGVIACIGE+L+EREAGKTFDVCF QLKA+ADA+P WDN+V+AYEPVWAI Sbjct: 1 MAATSLTAPPSFSGLRRISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRGVVAMAGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAVPSWDNIVVAYEPVWAI 230
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.458e-80 Identity = 155/225 (68.89%), Postives = 174/225 (77.33%), Query Frame = 1 Query: 91 SMVSTNCAQFSGLRRS--------SPTQSFSQHVNXXXXXXXXXXXXXXXXVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPXWDNVVIAYEPVWAI 741 S VST QFSGLRRS S SF Q+V+ VVAMA S KFFVGGNWKCNGTKESITKLVSDLN A LE FVYIDQVK+SLT R+EI+AQN W+GKGGAFTGEISVEQLKD+GC+WV+LGHSERRHVIGE ++FIGKKAAYAL++G+GVIACIGE L+EREAGKTFDVC+QQLKA+ADA+P WDNVV+AYEPVWAI Sbjct: 17 SAVST---QFSGLRRSFLKLENSVSTQSSFFQNVDSHLRLSSSSRRCPRG-VVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYIDQVKSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEFIGKKAAYALNQGVGVIACIGELLEEREAGKTFDVCYQQLKAFADALPSWDNVVVAYEPVWAI 237
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 4.241e-80 Identity = 146/208 (70.19%), Postives = 165/208 (79.33%), Query Frame = 1 Query: 118 FSGLRRSSPTQSFSQHVNXXXXXXXXXXXXXXXXVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPXWDNVVIAYEPVWAI 741 +SGLRRS P S VVAMA + KFFVGGNWKCNGTK+ I+KLVSDLN AKLE F+Y+DQVK+SLTDRIEI+ QNSWV KGGAFTGEISVEQLKDIG KWV+LGHSERRHVIGEDDQFIGKKAAYAL+EGLGVIACIGE+L+EREAGKTFDVC++QLKA+ADA+P W+N+V+AYEPVWAI Sbjct: 22 YSGLRRSCPKLDQSHSSLFQHLSLSSSSRKASRAVVAMAGTGKFFVGGNWKCNGTKDLISKLVSDLNSAKLEPDVDVVVAPPFLYLDQVKSSLTDRIEISGQNSWVAKGGAFTGEISVEQLKDIGRKWVILGHSERRHVIGEDDQFIGKKAAYALNEGLGVIACIGEKLEEREAGKTFDVCYEQLKAFADAVPSWENIVVAYEPVWAI 229
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 4.108e-75 Identity = 134/174 (77.01%), Postives = 151/174 (86.78%), Query Frame = 1 Query: 220 VVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPXWDNVVIAYEPVWAI 741 +VAMA S KFFVGGNWKCNGTKESI+KLVSDLN A LE F+YIDQVK+SLTDRIE++AQN+W+GKGGAFTGEIS EQL DIGC+WV+LGHSERRHVIGEDD+FIGKKAAYALS+ L V+ACIGE L+EREAGKTFDVCF+Q+KA+AD I W NVVIAYEPVWAI Sbjct: 40 LVAMAGSGKFFVGGNWKCNGTKESISKLVSDLNAATLESDVDVVVAPPFIYIDQVKSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERRHVIGEDDEFIGKKAAYALSQNLKVMACIGELLEEREAGKTFDVCFKQMKAFADNITDWTNVVIAYEPVWAI 213
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.163e-53 Identity = 100/169 (59.17%), Postives = 126/169 (74.56%), Query Frame = 1 Query: 244 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYAD-AIPXWDNVVIAYEPVWAI 741 KFFVGGNWKCNGT+ES++K+V LN+ + +V++ L I++AAQN WV KGGAFTGE+S + L ++G WV+LGHSERR ++GE ++F+GKKAAYA SEGLGVIACIGE L+EREAGKTFDVCF+QLK++A WDNVV+AYEPVWAI Sbjct: 4 KFFVGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYAQSEGLGVIACIGELLEEREAGKTFDVCFKQLKSFARFPAKPWDNVVVAYEPVWAI 172
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.056e-49 Identity = 92/168 (54.76%), Postives = 116/168 (69.05%), Query Frame = 1 Query: 244 KFFVGGNWKCNGTKESITKLVSDLN--DAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPXWDNVVIAYEPVWAI 741 KFFVGGNWKCNGT E + K+++ LN D + +V++ VKN L +AAQN WV KGGAFTGE+S E L ++ WV+LGHSERR ++GE ++F+G K AYALS+GL VIAC+GE L+ERE+G T DV Q KA AD + W NVV+AYEPVWAI Sbjct: 4 KFFVGGNWKCNGTAEEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDFHVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEERESGSTMDVVAAQTKAIADRVKDWTNVVVAYEPVWAI 171
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3) HSP 1 Score: 194.512 bits (493), Expect = 5.056e-49 Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 1 Query: 244 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPXWDNVVIAYEPVWAI 741 KFFVGGNWKCNGT + + K+V LN+ ++ +V++ VK+ L +AAQN WV KGGAFTGE+S E L ++G WV+LGHSERR ++GE ++F+G K AYALS+GL VIAC+GE L++REAG T DV Q KA A+ I W NVV+AYEPVWAI Sbjct: 4 KFFVGGNWKCNGTTDQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEFHVAAQNCWVKKGGAFTGEVSAEMLVNLGVPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAEKIKDWSNVVVAYEPVWAI 171
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 6.604e-49 Identity = 92/170 (54.12%), Postives = 119/170 (70.00%), Query Frame = 1 Query: 238 SNKFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPXWDNVVIAYEPVWAI 741 + KFFVGGNWKCNGT E + K+V+ LN+A++ + +V++ VK++L +AAQN WV KGGAFTGE+S E L ++ WV+LGHSERR ++ E +F+G K AYAL++GL VIAC+GE L+EREAG T DV Q KA AD + W NVVIAYEPVWAI Sbjct: 2 ARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQGLKVIACVGETLEEREAGSTMDVVAAQTKAIADRVTNWSNVVIAYEPVWAI 171
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.625e-49 Identity = 97/171 (56.73%), Postives = 115/171 (67.25%), Query Frame = 1 Query: 229 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPXWDNVVIAYEPVWAI 741 MA S KFFVGGNWK NG K+S+ +L+ LN AK+ YID + L +I +AAQN + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAI Sbjct: 1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDYGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAI 171
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 8.625e-49 Identity = 97/171 (56.73%), Postives = 115/171 (67.25%), Query Frame = 1 Query: 229 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPXWDNVVIAYEPVWAI 741 MA S KFFVGGNWK NG K+S+ +L+ LN AK+ YID + L +I +AAQN + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAI Sbjct: 1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAI 171 The following BLAST results are available for this feature:
BLAST of FC921481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921481 ID=FC921481; Name=FC921481; organism=Citrus clementina; type=EST; length=742bpback to top |