FC921493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP3_ARATH (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana GN=CLPP3 PE=1 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 5.967e-72 Identity = 141/214 (65.89%), Postives = 169/214 (78.97%), Query Frame = 1 Query: 31 KMEMSLTASSFSKPLFFSNQSLSKTHFLXXXXXXXXXXXIKTRRPTCIKAANS-SPSIAQTLSTNWDVSNFAVNNNTSSPY-LPKFEELDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 +M + L +SS S P+ N + + KT +P C++++ S S QTLS+NWDVS+F++++ SP LP FEELDTTNMLLRQRI+FLGSQVDD+TAD +ISQLL LDAEDS++DI LFINSPGGS+TAGMGIYDAMK CKADVST+CLGLAASMGAFLLA+GSKGKRYCMPN++VMIHQPLGTAGGKAT+MSIRIREM Sbjct: 2 EMSLRLASSSTSNPICLLNPGKNLNFPIRNHRIP------KTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREM 209
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP4_ARATH (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana GN=CLPP4 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.872e-41 Identity = 93/214 (43.46%), Postives = 133/214 (62.15%), Query Frame = 1 Query: 25 NKKMEMSLTASSFSKPLFFSNQSLSKTHFLXXXXXXXXXXXIKTRRPTCIKAANSSPSIAQTLSTNWDVSNFAVNNNTSSPYLPKFEELDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 + ++ SL +S + S+ S K + L ++T P+ ++ AN+S ++QT + A+ E D +LLR+RI+FLGS +DD AD I+SQLL LDA+D KKDI+LFINSPGGS++A M IYD ++L +ADVSTI LG+AAS + +L AG+KGKR+ MPN R+MIHQPLG A G+A D+ I+ +E+ Sbjct: 7 SSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFANASIEMSQTQES-------AIRG----------AESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEV 203
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP1_ANAVT (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP1 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.445e-41 Identity = 84/125 (67.20%), Postives = 103/125 (82.40%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LLR+RIIFLG QVD A+ I++QLLFLDAED +KDI L+INSPGGSVTAGMGI+D MK + DV TIC GLAASMGAFLL+AG+KGKR +P++R+MIHQPLG A G+ATD+ I+ RE+ Sbjct: 18 DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEIQAREI 142
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP1_ANASP (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=clpP1 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.194e-41 Identity = 83/125 (66.40%), Postives = 103/125 (82.40%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LLR+RI+FLG QVD A+ I++QLLFLDAED +KDI L+INSPGGSVTAGMGI+D MK + DV TIC GLAASMGAFLL+AG+KGKR +P++R+MIHQPLG A G+ATD+ I+ RE+ Sbjct: 18 DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEIQAREI 142
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_SYNWW (ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.585e-40 Identity = 80/125 (64.00%), Postives = 98/125 (78.40%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RIIFLGS +DD A+ +I+QLLFL+AED KDI L+INSPGGS+TAGM IYD ++ + DVSTIC+GLAASMGAFLLAAG KGKRY +PNA +MIHQP G G+ATD+ I R + Sbjct: 20 DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQGQATDIEIHARRI 144
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_BURTA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=clpP PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.070e-40 Identity = 78/125 (62.40%), Postives = 105/125 (84.00%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I+ RE+ Sbjct: 32 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREI 156
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_BURPS (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei GN=clpP PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.070e-40 Identity = 78/125 (62.40%), Postives = 105/125 (84.00%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I+ RE+ Sbjct: 42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREI 166
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_BURP6 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 668) GN=clpP PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.070e-40 Identity = 78/125 (62.40%), Postives = 105/125 (84.00%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I+ RE+ Sbjct: 42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREI 166
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_BURP1 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 1710b) GN=clpP PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.070e-40 Identity = 78/125 (62.40%), Postives = 105/125 (84.00%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I+ RE+ Sbjct: 32 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREI 156
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_BURP0 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 1106a) GN=clpP PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.070e-40 Identity = 78/125 (62.40%), Postives = 105/125 (84.00%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I+ RE+ Sbjct: 42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREI 166 The following BLAST results are available for this feature:
BLAST of FC921493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921493 ID=FC921493; Name=FC921493; organism=Citrus clementina; type=EST; length=667bpback to top |