FC921678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921678 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.891e-50 Identity = 102/227 (44.93%), Postives = 144/227 (63.44%), Query Frame = 3 Query: 33 PIQEGQPIVFTYEVNFDSSDIKWPSRWDAYLKMEGSKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPNNAGLLCIMVGNGVQILGMAVVTIFFAALGFMSPASRGTLITGMLFIYMILGVAAGYVAVRLWRTIGCGDLKG--WISVAWKAACFFPGIAFLILTTLNFLLWGSHSTGAIPFSXXXXXXXXWFCI 707 P +E Q + FTY V+++ SDIKW SRWD YL M ++HWFSI+NS++V+ FL+GI+ +I +RT+R+D+ Y +KE + E SGWKLV GDVFR P +L ++G+G+Q+ M ++ IF A LG +SP+SRG L+T F++M +GV G+ A RL+RT LKG W A+ A +PG+ F I LN +WG HS+GA+PF WF I Sbjct: 243 PTKENQ-LYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY---NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRT-----LKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGI 460
BLAST of FC921678 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.891e-50 Identity = 102/227 (44.93%), Postives = 144/227 (63.44%), Query Frame = 3 Query: 33 PIQEGQPIVFTYEVNFDSSDIKWPSRWDAYLKMEGSKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPNNAGLLCIMVGNGVQILGMAVVTIFFAALGFMSPASRGTLITGMLFIYMILGVAAGYVAVRLWRTIGCGDLKG--WISVAWKAACFFPGIAFLILTTLNFLLWGSHSTGAIPFSXXXXXXXXWFCI 707 P +E Q + FTY V+++ SDIKW SRWD YL M ++HWFSI+NS++V+ FL+GI+ +I +RT+R+D+ Y +KE + E SGWKLV GDVFR P +L ++G+G+Q+ M ++ IF A LG +SP+SRG L+T F++M +GV G+ A RL+RT LKG W A+ A +PG+ F I LN +WG HS+GA+PF WF I Sbjct: 242 PTKENQ-LYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY---NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRT-----LKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGI 459
BLAST of FC921678 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.891e-50 Identity = 102/227 (44.93%), Postives = 144/227 (63.44%), Query Frame = 3 Query: 33 PIQEGQPIVFTYEVNFDSSDIKWPSRWDAYLKMEGSKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPNNAGLLCIMVGNGVQILGMAVVTIFFAALGFMSPASRGTLITGMLFIYMILGVAAGYVAVRLWRTIGCGDLKG--WISVAWKAACFFPGIAFLILTTLNFLLWGSHSTGAIPFSXXXXXXXXWFCI 707 P +E Q + FTY V+++ SDIKW SRWD YL M ++HWFSI+NS++V+ FL+GI+ +I +RT+R+D+ Y +KE + E SGWKLV GDVFR P +L ++G+G+Q+ M ++ IF A LG +SP+SRG L+T F++M +GV G+ A RL+RT LKG W A+ A +PG+ F I LN +WG HS+GA+PF WF I Sbjct: 243 PTKENQ-LYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY---NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRT-----LKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGI 460
BLAST of FC921678 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.891e-50 Identity = 102/227 (44.93%), Postives = 144/227 (63.44%), Query Frame = 3 Query: 33 PIQEGQPIVFTYEVNFDSSDIKWPSRWDAYLKMEGSKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPNNAGLLCIMVGNGVQILGMAVVTIFFAALGFMSPASRGTLITGMLFIYMILGVAAGYVAVRLWRTIGCGDLKG--WISVAWKAACFFPGIAFLILTTLNFLLWGSHSTGAIPFSXXXXXXXXWFCI 707 P +E Q + FTY V+++ SDIKW SRWD YL M ++HWFSI+NS++V+ FL+GI+ +I +RT+R+D+ Y +KE + E SGWKLV GDVFR P +L ++G+G+Q+ M ++ IF A LG +SP+SRG L+T F++M +GV G+ A RL+RT LKG W A+ A +PG+ F I LN +WG HS+GA+PF WF I Sbjct: 242 PTKENQ-LYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY---NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRT-----LKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGI 459
BLAST of FC921678 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.891e-50 Identity = 102/227 (44.93%), Postives = 144/227 (63.44%), Query Frame = 3 Query: 33 PIQEGQPIVFTYEVNFDSSDIKWPSRWDAYLKMEGSKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPNNAGLLCIMVGNGVQILGMAVVTIFFAALGFMSPASRGTLITGMLFIYMILGVAAGYVAVRLWRTIGCGDLKG--WISVAWKAACFFPGIAFLILTTLNFLLWGSHSTGAIPFSXXXXXXXXWFCI 707 P +E Q + FTY V+++ SDIKW SRWD YL M ++HWFSI+NS++V+ FL+GI+ +I +RT+R+D+ Y +KE + E SGWKLV GDVFR P +L ++G+G+Q+ M ++ IF A LG +SP+SRG L+T F++M +GV G+ A RL+RT LKG W A+ A +PG+ F I LN +WG HS+GA+PF WF I Sbjct: 242 PTKENQ-LYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY---NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRT-----LKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGI 459
BLAST of FC921678 vs. ExPASy Swiss-Prot
Match: TM9S2_HUMAN (Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.556e-47 Identity = 96/220 (43.64%), Postives = 137/220 (62.27%), Query Frame = 3 Query: 54 IVFTYEVNFDSSD-IKWPSRWDAYLK-MEGSKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPNNAGLLCIMVGNGVQILGMAVVTIFFAALGFMSPASRGTLITGMLFIYMILGVAAGYVAVRLWRTIGCGDLKGWISVAWKAACFFPGIAFLILTTLNFLLWGSHSTGAIPFSXXXXXXXXWFCI 707 I +TY V+F+ D I+W SRWD L+ M + + WFSI+NSL+++ FL+G+V +I LRT+ +D+ RY ++D AQ E GWKLV GD+FR P LL + +G+G QIL M VT+FFA LGF+SPA+RG L+T + ++++LG AGYVA R +++ G + W + + PGI F +N +LWG S+ AIPF WFCI Sbjct: 267 IAYTYSVSFEEDDKIRWASRWDYILESMPHTHIQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDAQ---EEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGG---EKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCI 480
BLAST of FC921678 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.268e-46 Identity = 94/220 (42.73%), Postives = 137/220 (62.27%), Query Frame = 3 Query: 54 IVFTYEVNFDSS-DIKWPSRWDAYLK-MEGSKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPNNAGLLCIMVGNGVQILGMAVVTIFFAALGFMSPASRGTLITGMLFIYMILGVAAGYVAVRLWRTIGCGDLKGWISVAWKAACFFPGIAFLILTTLNFLLWGSHSTGAIPFSXXXXXXXXWFCI 707 I +TY ++F+ +I+W SRWD L+ M + + WFSI+NSL+++ FL+G+V +I LRT+ +D+ RY ++D AQ E GWKLV GD+FR P LL + +G+G QIL M VT+FFA LGF+SPA+RG L+T + ++++LG AGYVA R +++ G + W + + PGI F +N +LWG S+ AIPF WFCI Sbjct: 267 IAYTYSISFEEEKNIRWASRWDYILESMPHTHIQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDAQ---EEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGG---EKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCI 480
BLAST of FC921678 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.268e-46 Identity = 94/220 (42.73%), Postives = 137/220 (62.27%), Query Frame = 3 Query: 54 IVFTYEVNFDSS-DIKWPSRWDAYLK-MEGSKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPNNAGLLCIMVGNGVQILGMAVVTIFFAALGFMSPASRGTLITGMLFIYMILGVAAGYVAVRLWRTIGCGDLKGWISVAWKAACFFPGIAFLILTTLNFLLWGSHSTGAIPFSXXXXXXXXWFCI 707 I +TY ++F+ +I+W SRWD L+ M + + WFSI+NSL+++ FL+G+V +I LRT+ +D+ RY ++D AQ E GWKLV GD+FR P LL + +G+G QIL M VT+FFA LGF+SPA+RG L+T + ++++LG AGYVA R +++ G + W + + PGI F +N +LWG S+ AIPF WFCI Sbjct: 266 IAYTYSISFEEEKNIRWASRWDYILESMPHTHIQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDAQ---EEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGG---EKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCI 479
BLAST of FC921678 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.657e-46 Identity = 95/220 (43.18%), Postives = 136/220 (61.82%), Query Frame = 3 Query: 54 IVFTYEVNFDSSD-IKWPSRWDAYLK-MEGSKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPNNAGLLCIMVGNGVQILGMAVVTIFFAALGFMSPASRGTLITGMLFIYMILGVAAGYVAVRLWRTIGCGDLKGWISVAWKAACFFPGIAFLILTTLNFLLWGSHSTGAIPFSXXXXXXXXWFCI 707 I +TY V+F+ I+W SRWD L+ M + + WFSI+NSL+++ FL+G+V +I LRT+ +D+ RY ++D AQ E GWKLV GD+FR P LL + +G+G QIL M VT+FFA LGF+SPA+RG L+T + ++++LG AGYVA R +++ G + W + + PGI F +N +LWG S+ AIPF WFCI Sbjct: 267 IAYTYSVSFEEDKKIRWASRWDYILESMPHTHIQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDAQ---EEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGG---EKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCI 480
BLAST of FC921678 vs. ExPASy Swiss-Prot
Match: PHG1A_DICDI (Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.222e-42 Identity = 88/232 (37.93%), Postives = 138/232 (59.48%), Query Frame = 3 Query: 24 VSMPIQEGQP----IVFTYEVNFDSSDIKWPSRWDAYLKMEGSKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPNNAGLLCIMVGNGVQILGMAVVTIFFAALGFMSPASRGTLITGMLFIYMILGVAAGYVAVRLWRTIGCGDLKGWISVAWKAACFFPGIAFLILTTLNFLLWGSHSTGAIPFSXXXXXXXXWFCI 707 +S+ ++EG+ +++TYEV + S + W RWD Y + + VHWFSILNSLM++ L +V +I +RT+++D+ RY +D EE +GWK++ GDVFR P++ LL + +G+GVQI M ++T+ FA LGF+SPA+ G L T ++ ++++ + AGY + R++ TI G + W A PGI F I +N L G+ S+ A+PF WF I Sbjct: 232 LSVSVKEGEDQERFVLWTYEVKYTPSPVLWNKRWDIYFESNDNSVHWFSILNSLMIVFILTVMVAMIIIRTLKKDIRRYTSIDTSEDRDSQEE-TGWKMIHGDVFRPPSHPMLLSVCIGSGVQIFSMTLITMIFAVLGFLSPANIGGLATALIVLFVLSAMFAGYFSTRVF-TIFKG--RNWKKNTIYTALSMPGIIFGIFFFVNMFLRGAKSSAAVPFGTFASIIAMWFGI 459 The following BLAST results are available for this feature:
BLAST of FC921678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921678 ID=FC921678; Name=FC921678; organism=Citrus clementina; type=EST; length=708bpback to top |