FC921746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32 Identity = 69/136 (50.74%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 52 CKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKAS-PELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSD 456 C FY T CK G +C+F+H + + + V KE+ GG L GLI CKY+ GGCKYG TC+F+H+ I KS AS PELNFLGLP+R E+ECP+YMRNGSC YG +C+FNHPDP G+D Sbjct: 116 CSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVRE-KEDDGGKL----GLIDCKYYFRTGGCKYGETCRFNHT-------IPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTD 239
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.918e-31 Identity = 84/232 (36.21%), Postives = 116/232 (50.00%), Query Frame = 1 Query: 52 CKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVA------------DEGSDHFNEASNPASRSWSP--NIISRKTVPNLDNHSFHPHWML--KSKFNSLQ-GSVYPQAKAELALSVLRL--AI*QDGRYLTYHHSM 690 C FY T CK+G +C+F+H + + + + + VE L+ CKY+ GGCKYG +C+FSH KE S + PELNFLGLPIR E ECPFYMRNGSC +G DC+FNHPDP A + GS S +S SWS ++ T P + + H + S +N Q S YP ++ LA S ++ ++ + + Y H M Sbjct: 107 CSFYMRTGSCKYGSSCKFNHPVRRKLQ------IGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEH------NSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNNSLAETSSFSQYQHQM 326
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H34_ARATH (Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis thaliana GN=At3g06410 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20 Identity = 52/155 (33.55%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 16 GEGLMEKTVQIQCKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDHFNEASNP 480 GE E+ + C +Y T C +G CRF+H ++ GV G + G+L E G C++ + G CK+G +CK+ H P+ A L++LG P+R E EC +Y+R G C +G+ CRFNHP P+A +G + P Sbjct: 48 GESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGA---VIGGVRG----EAGALPERMGHPVCQHFMRTGTCKFGASCKYHH----PRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQP 191
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H3_ARATH (Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis thaliana GN=At1g04990 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 55/147 (37.41%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 52 CKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPEL-NFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEG-SDHFNEASNPAS 486 C+FY T C +G +CR++H ++ V KE L E G C+Y L G CKYG TCK+ H K++ A P + N +GLP+R+ E CP+Y+R G+C +GV C+F+HP P D G S + +S PA+ Sbjct: 53 CQFYLRTGLCGYGSSCRYNHPTHLPQD------VAYYKEE----LPERIGQPDCEYFLKTGACKYGPTCKYHHPKDR--------NGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQP--DNGHSTAYGMSSFPAA 179
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H12_ORYSJ (Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=Os01g0917400 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 48/134 (35.82%), Postives = 71/134 (52.99%), Query Frame = 1 Query: 31 EKTVQIQCKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPD 432 E++ + C +Y T C+ G +CRF+H +++ L + MK G E G C+Y+L G CK+G TCKF H +EK +LN LG P+R E EC +Y++ G C YG C+F+HP+ Sbjct: 79 ERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRN---LAIASAR-MK----GEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGI------AGRVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHPE 198
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H65_ORYSJ (Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN=Os12g0278800 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 163 KENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDP 435 KE + + E + CKY+ + GGCK+G CK+ H K K++ +LNFLGLP+R E ECP+YMR GSC Y +C+F+HPDP Sbjct: 227 KEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEG----KTDAEKVDLNFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHPDP 313
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18 Identity = 44/135 (32.59%), Postives = 67/135 (49.63%), Query Frame = 1 Query: 31 EKTVQIQCKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDP 435 E+ + C +Y T C+ G C+F+H ++ + G + G C+Y+L G CK+G TCKF H +EK + +LN LG P+R +E EC +Y+R G C +G C+F+HP P Sbjct: 55 ERIGEPDCSYYMRTGLCRFGMTCKFNHPADRK--------MAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRV------QLNALGYPLRPNEKECAYYLRTGQCKFGSTCKFHHPQP 175
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H33_ARATH (Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana GN=ZFN1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.074e-18 Identity = 45/135 (33.33%), Postives = 67/135 (49.63%), Query Frame = 1 Query: 31 EKTVQIQCKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDP 435 E+ + C +Y T C+ G CRF+H ++ + G E G C+Y+L G CK+G TCKF H + K + S LN LG P+R +E++C +++R G C +G C+FNHP P Sbjct: 39 ERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRE--------LVIATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVS------LNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQP 159
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H37_ARATH (Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis thaliana GN=HUA1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17 Identity = 48/157 (30.57%), Postives = 73/157 (46.50%), Query Frame = 1 Query: 31 EKTVQIQCKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKE------------------KPQTYIKKSEKASPEL--NFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVA 441 E+ + C +Y T+ CK+G C+F+H E++ + SL E C +++ G CK+G +CKF H K+ +P +P L N GLP+R E++CPFY++ GSC YG CR+NHP+ A Sbjct: 224 ERPGEPDCPYYIKTQRCKYGSKCKFNHPREEA----------AVSVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTA 370 HSP 2 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 47/167 (28.14%), Postives = 78/167 (46.71%), Query Frame = 1 Query: 19 EGLMEKTVQIQCKFYQGTEGCKHGEACRFSHSMEKSENP----LPFSGVNGMKENKGGSLV-----------------------EMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKS-EKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDP 435 +GL ++ ++ C FY T CK+G CR++H + P + +S V+ N LV + G C Y++ G CK+G CKF H ++ K++ ++ + +L+ G P R + CP+YM+ G+C YG C+F+HP P Sbjct: 335 KGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPP 501 HSP 3 Score: 83.9593 bits (206), Expect = 8.648e-16 Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 1 Query: 52 CKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPV 438 C Y T CK GE+CRF H + E +P + N+ E G C Y++ CKYG+ CKF+H +E+ ++ + LP R E C FYM+ G C +G+ C+F+HP + Sbjct: 180 CTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNE--EYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD---------SLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDI 297
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H58_ARATH (Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis thaliana GN=At5g18550 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.576e-17 Identity = 50/173 (28.90%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 16 GEGLMEKTVQIQCKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASP-ELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDHFNEASNPASRSWSPNIISRKTVPN 531 GE E+ + C +Y T C +G CRF+H ++ V G + G E G C++ + G CK+G +CK+ H ++ + +P LN++G P+R E EC ++MR G C +G CR++HP P + + A + P++ S +TVP+ Sbjct: 45 GETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAP-------VLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGG-----GDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPSLQS-QTVPS 204 The following BLAST results are available for this feature:
BLAST of FC921746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921746 ID=FC921746; Name=FC921746; organism=Citrus clementina; type=EST; length=696bpback to top |