FC923092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYE_IPONI (Phytochrome E OS=Ipomoea nil GN=PHYE PE=2 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 1.051e-90 Identity = 165/221 (74.66%), Postives = 187/221 (84.62%), Query Frame = 3 Query: 6 GRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 668 G+CWL+GVTPTE+Q+KDIA WLL+NHGD TGLSTD L++AGYPGA LLG AV GMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE KD+GG+MHPRSSF AFLEVVK+RS PWE SEINAIHSLQ++MRDS Q + EN K + QQN S ELSS+A E+VRL+ETAT PIFGVDSSG INGWNAK+AELTGL A+ A+GK LID+V HE+S Sbjct: 435 GKCWLLGVTPTETQVKDIAEWLLHNHGDSTGLSTDCLSDAGYPGAPLLGDAVSGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFIAFLEVVKSRSLPWEDSEINAIHSLQLIMRDSLQGI-GENYMKSVSSPQQNDSDGVRFYELSSMALELVRLVETATVPIFGVDSSGLINGWNAKIAELTGLQANVAIGKYLIDDVTHEDS 654
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHY_PINSY (Phytochrome OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 6.812e-90 Identity = 157/230 (68.26%), Postives = 194/230 (84.35%), Query Frame = 3 Query: 3 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 GG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTDSLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+ +MHPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SF+++ +++ +K +++ N ++QG+DELSSVA EMVRLIETATAPI VD +G +NGWNAKVAELTGLP EAMG SL+ ++V E+S VE ++ Sbjct: 457 GGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRCSFRDI-DDSGTKTMVHSRLNYLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKML 685
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHY1_SELMA (Phytochrome 1 OS=Selaginella martensii GN=PHY1 PE=3 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.088e-87 Identity = 158/230 (68.70%), Postives = 191/230 (83.04%), Query Frame = 3 Query: 3 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 G R WL+G+TP+E+Q+KDIA WLL +H D TGLSTDSLA+AGYPGAA LG VCGMA A+IT+KDFLFWFRSHTAKEVKWGGAKH P+ KD+G KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DELS+VA EMVRLIETATAPI VDSSG INGWNAKVA++TGLP +EAMG+SL E+V ES VE L+ Sbjct: 452 GKRFWLLGITPSEAQIKDIAEWLLEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVADVTGLPVTEAMGRSLAKELVLHESADMVERLL 680
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYB_TOBAC (Phytochrome B OS=Nicotiana tabacum GN=PHYB PE=2 SV=2) HSP 1 Score: 320.472 bits (820), Expect = 5.397e-87 Identity = 160/229 (69.87%), Postives = 187/229 (81.66%), Query Frame = 3 Query: 6 GRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAALLG AVCGMA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSL +++RDSF++ E N SK + Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVAELT L EAMGKSL+ ++VH+ES E L+ Sbjct: 461 GKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSL-LILRDSFKDAEASN-SKAVVHAQLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTDLSVEEAMGKSLVHDLVHKESQETAEKLL 687
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYB_SOLTU (Phytochrome B OS=Solanum tuberosum GN=PHYB PE=3 SV=2) HSP 1 Score: 318.161 bits (814), Expect = 2.679e-86 Identity = 157/229 (68.56%), Postives = 186/229 (81.22%), Query Frame = 3 Query: 6 GRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSL +AGYPGAA LG AVCGMA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ E N SK + ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVAELTG+ EAMGKSL+ ++V++ES E L+ Sbjct: 458 GKYYPLGVTPTEAQIKDIVEWLLAYHGDSTGLSTDSLPDAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASN-SKAIVHAHLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGVSVEEAMGKSLVHDLVYKESQETAEKLL 685
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHY2_CERPU (Phytochrome 2 OS=Ceratodon purpureus GN=PHY2 PE=3 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 3.498e-86 Identity = 156/230 (67.83%), Postives = 187/230 (81.30%), Query Frame = 3 Query: 3 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 G R WL+G TPTE+Q+KDIA WLL H D TGLSTDSLA+A YPGA LLG AVCGMA A+IT+KDFLFWFRSHTAKEVKWGGAKH P KD+G KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+ G+DELS VA EMVRLIETATAPI VDS+G INGWNAK+A +TGLP SEAMG+SL+ ++V +ES VE L+ Sbjct: 444 GKRFWLLGTTPTENQIKDIAEWLLEYHKDSTGLSTDSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAEKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEAMGRSLVKDLVLDESVVVVERLL 672
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYB1_SOLLC (Phytochrome B1 OS=Solanum lycopersicum GN=PHYB1 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 2.962e-85 Identity = 154/224 (68.75%), Postives = 184/224 (82.14%), Query Frame = 3 Query: 21 VGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ E N + + ++QG+DELSSVA EMVRLIETATAPIFGVD +G INGWN KV ELTGL A EA GKSL+ +++++ES + E L+ Sbjct: 465 LGVTPTEAQIKDIVEWLLAYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASNSKAIVHALGE--MELQGIDELSSVAREMVRLIETATAPIFGVDVNGRINGWNEKVVELTGLSAEEAKGKSLVHDLLYKESQESAEKLL 686
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYB_ARATH (Phytochrome B OS=Arabidopsis thaliana GN=PHYB PE=1 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 1.625e-83 Identity = 149/232 (64.22%), Postives = 182/232 (78.45%), Query Frame = 3 Query: 6 GRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 G+ + +GV P+E Q+KD+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ +++++E+ V L+ Sbjct: 485 GKYYPLGVAPSEVQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLL 716
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHY_ADICA (Phytochrome 1 OS=Adiantum capillus-veneris GN=PHY1 PE=2 SV=2) HSP 1 Score: 308.145 bits (788), Expect = 2.772e-83 Identity = 149/230 (64.78%), Postives = 183/230 (79.57%), Query Frame = 3 Query: 3 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 G +CWL+G TPTE+Q+ DIA WLL+ H D TGLSTDSLA+ GYP A+ LG AVCG+A A+IT+ DFLFWFRSHTAKEV+WGGA+H PE +D+G +MHPRSSFKAFLEVVK +S PWE E++AIHSLQ+++R SFQ++++ N +K + + N K+QG+DELS+VA EMVRLIETATAPI VD G INGWN KVAELTGL AMGKSL E+VHEES VE ++ Sbjct: 442 GKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLGDAVCGLAAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVKQQSLPWEDVEMDAIHSLQLILRGSFQDIDDSN-TKTMIHARLNDLKLQGLDELSTVASEMVRLIETATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERVL 670
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYB_SORBI (Phytochrome B OS=Sorghum bicolor GN=PHYB PE=3 SV=2) HSP 1 Score: 308.145 bits (788), Expect = 2.772e-83 Identity = 151/232 (65.09%), Postives = 184/232 (79.31%), Query Frame = 3 Query: 6 GRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK---VQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GAA LG AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ E + V G Q +++G++ELSSVA EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES VE L+ Sbjct: 501 GKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEEIVEKLL 732 The following BLAST results are available for this feature:
BLAST of FC923092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923092 ID=FC923092; Name=FC923092; organism=Citrus clementina; type=EST; length=694bpback to top |