FC923207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923207 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.414e-28 Identity = 77/229 (33.62%), Postives = 122/229 (53.28%), Query Frame = 2 Query: 20 SKTIS*KMASHLGICTPCASEIITGFPSYRSPPLLRNRDFCGRIKAVADNRGSLDHLQRSSLN------QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIXAEVKDGVLYITIPR 688 S +S K S + PC + FP R P L R+ + DN+ + + R + + + +P++ + +S G+ D + R+++QM++TM+RI ED +T P + G R PW I++ E++ ++R D+PG+S+ DVKV VE+ +LVIK++ + N E+ W Y Y TR+ LPDN E EK+ AE+KDGVLYITIP+ Sbjct: 12 SPILSQKPGSSVKSTPPC----MASFPLRRQLPRLGLRNVRAQAGGDGDNKDNSVEVHRVNKDDQGTAVERKPRRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFED----AITIPGRN----IGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGG---------EDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPK 219
BLAST of FC923207 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.652e-27 Identity = 76/219 (34.70%), Postives = 117/219 (53.42%), Query Frame = 2 Query: 59 ICTPCASEIITGFPSYRSPPLLRNRDFCGRIKAVADNRGSLDHLQR--------SSLNQSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWP-SQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIXAEVKDGVLYITIPR 688 +C+P A S + R RI+A S+D +Q+ SS+ + ++ VS G+ D RT++QM++TM+R+ ED T P S + R SG R PW I+E E++ K+R D+PG+S+ DVK+ VE+++LVIK E+ + + ++ W SY TR+ LPDN E +KI AE+K+GVL+ITIP+ Sbjct: 12 LCSPLAPSPSVSSKSATPFSVSFPRKIPSRIRAQDQRENSIDVVQQGQQKGNQGSSVEKRPQQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFED------TMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKE----------DSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPK 214
BLAST of FC923207 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.817e-27 Identity = 72/188 (38.30%), Postives = 107/188 (56.91%), Query Frame = 2 Query: 152 KAVADNRGSLDHLQRSSLN---------QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIXAEVKDGVLYITIPR 688 +A DN+ + + SS + +P + A VS G+ D RT++QM++TM+R+ ED +T+P + SG RTPW I + EN+ K+R D+PG+S+ DVKV VE MLVIK E + + ++ W N Y SY TR++LPDNV +KI AE+K+GVL+I+IP+ Sbjct: 49 RATGDNKDTSVDVHHSSAQGGNNQGTAVERRPTRMALDVSPFGVLDPMSPMRTMRQMIDTMDRLFEDT----MTFPGRNRA--SGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDG-------RDKHSWGRN-YSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPK 222
BLAST of FC923207 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.806e-27 Identity = 72/187 (38.50%), Postives = 113/187 (60.43%), Query Frame = 2 Query: 128 NRDFCGRIKAVADNRGSLDHLQRSSLNQSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIXAEVKDGVLYITIPR 688 N+D + +N+G + + S + +P++ A VS G+ D RT++QMM+TM+R+ ED +T+P + R G R PW I++ EN+ K+R D+PG+S+ +VKV VE+ +LVIK E ++ E+ D S W N Y SY TR++LPDNV+ +K+ AE+K+GVL I+IP+ Sbjct: 61 NKDTSVDVHVSNNNQGGNN---QGSAVERRPRRMALDVSPFGLLDPMSPMRTMRQMMDTMDRLFEDT----MTFPGSRNR---GTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEH-KKEESGKDDS-------WGRN-YSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPK 228
BLAST of FC923207 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.071e-26 Identity = 66/178 (37.08%), Postives = 103/178 (57.87%), Query Frame = 2 Query: 164 DNRGSLDHLQRSSLN---QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIXAEVKDGVLYITIPR 688 DN + H+ + + +P++ A +S GI D + R+++Q+++TM+R+ ED +T+P + G R PW I++ E++ ++R D+PG+++ DVKV VE+ MLVIK E D S W S Y SY TR+ LPDN E +K+ AE+K+GVLYITIP+ Sbjct: 6 DNSVEVQHVSKGDQGTAVEKKPRRTAMDISPFGILDPWSPMRSMRQILDTMDRVFEDT----MTFPGRN----IGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDS-------WSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPK 168
BLAST of FC923207 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.940e-22 Identity = 60/177 (33.90%), Postives = 100/177 (56.50%), Query Frame = 2 Query: 161 ADNRGSLDHLQRSSLNQSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAE-KAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIXAEVKDGVLYITIPR 688 A N G+ Q+ + Q +P++ +S G+ D RT++QM++TM+R+ +D V +P++ R + R R PW I E E + K+R D+PG+SR +V+V VE+ LVI+ E K + E +G + W SY R+ALPD + ++ AE+K+GVL +++P+ Sbjct: 63 AQNAGN----QQGNAVQRRPRRAGFDISPFGLVDPMSPMRTMRQMLDTMDRLFDD----AVGFPTR--RSPAARARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGG----DGWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPK 225
BLAST of FC923207 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.146e-20 Identity = 57/169 (33.73%), Postives = 97/169 (57.40%), Query Frame = 2 Query: 191 QRSSLNQSQPKKRAA--PVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQER-VRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIXAEVKDGVLYITIPR 688 Q+ + Q +P++ +A +S G+ D RT++QM++TM+RI +D + +P+ R + +G R PW + E + + ++R D+PG+SR +VKV VE+ LVI+ E + +GS + W SY R+ALPD + K+ AE+K+GVL +T+P+ Sbjct: 67 QQGNAVQRRPRRSSALDGISPFGLVDPMSPMRTMRQMLDTMDRIFDD---VALGFPATPRRSLATG--EVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGS---GDGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPK 227
BLAST of FC923207 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16 Identity = 55/166 (33.13%), Postives = 89/166 (53.61%), Query Frame = 2 Query: 221 KKRAAPVSSPG---------IWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV-EFEKIXAEVKDGVLYITIPR 688 + AP+S G ++D F A R+V Q+M M+++ME+PF R R R W +RE E ++++D+PG+++ DVKV VE++ L+IK+E + E EEE+ YS+RI L N+ + + I AE+K+GVL +T+P+ Sbjct: 47 RSNRAPISRRGDFPASFFSDVFDPFRATRSVGQLMNLMDQLMENPF---------MAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETE--------EEEQR------RRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPK 189
BLAST of FC923207 vs. ExPASy Swiss-Prot
Match: HS26M_ARATH (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15 Identity = 38/94 (40.43%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 407 IRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIXAEVKDGVLYITIPR 688 ++E ++ YK+R +VPG+++ DVK+ V + +L IK + ++A + + EE+E W S YG Y+T ++LPD+ + E I AE+K+GVL + IPR Sbjct: 129 VKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGD----HKAEEEKGSPEEDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPR 218
BLAST of FC923207 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15 Identity = 53/161 (32.92%), Postives = 90/161 (55.90%), Query Frame = 2 Query: 209 QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV-EFEKIXAEVKDGVLYITIPR 688 +S P++R S ++D F R+V Q++ M++ ME+P + + SG RRG W I+E ++ +R+D+PG+SR DVK+ +E+ LVI+ E G E+ E +G +++RI LPD + + ++I AE+K+GVL + IP+ Sbjct: 55 RSVPRRRGDFFSD--VFDPFSPTRSVSQVLNLMDQFMENPLL-----SATRGMGASGARRG---WDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGE----------GKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPK 195 The following BLAST results are available for this feature:
BLAST of FC923207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923207 ID=FC923207; Name=FC923207; organism=Citrus clementina; type=EST; length=692bpback to top |