FC923455

Overview
NameFC923455
Unique NameFC923455
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923455 vs. ExPASy Swiss-Prot
Match: WDR26_MOUSE (WD repeat-containing protein 26 OS=Mus musculus GN=Wdr26 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 87/243 (35.80%), Postives = 139/243 (57.20%), Query Frame = 2
Query:    2 NGEYLASSSSDCSAIIWKVLEDSKLT-LKHTLRSHQNPVSFVAWSPDDTKLLTCG--NAEVLKLWDVGTGICKHTFGD-HGFIVSSCTWFPDSKRLVCGSSDTEKGIFMCDCDGNEIKAWRGTRIPKVLDLAVTPDGENLISVLSDKDIRILNLGTYAER-VISEEHPITSLSVSVDCKNFIVNLNSQEIHMWDVAGKWEKPFKYTGHSQNKYVIRSCFGGLDGTFITSGSENSQIYIWNRRN 715
            +G  LA+ S D + IIW+V  D+ L  L  TL  H   VS++AWSPDD+ L+ CG  +   L LW+V TG  +      H   ++S  W PD KR V G    +   + CD DGN + +W G R+  +  L+   DG+ +++  + + +R  N     +R ++ E+HPI S ++S + +  ++N+ +Q +H+WD+  +     KY G +Q  Y I SCFGG +  FI SGSE+ ++YIW++R+
Sbjct:  346 DGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQ--FYQCDLDGNLLDSWEGVRVQCLWCLS---DGKTVLASDTHQRVRGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDR-VLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRS 582          
BLAST of FC923455 vs. ExPASy Swiss-Prot
Match: WDR26_HUMAN (WD repeat-containing protein 26 OS=Homo sapiens GN=WDR26 PE=1 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 88/243 (36.21%), Postives = 138/243 (56.79%), Query Frame = 2
Query:    2 NGEYLASSSSDCSAIIWKVLEDSKLT-LKHTLRSHQNPVSFVAWSPDDTKLLTCG--NAEVLKLWDVGTGICKHTFGD-HGFIVSSCTWFPDSKRLVCGSSDTEKGIFMCDCDGNEIKAWRGTRIPKVLDLAVTPDGENLISVLSDKDIRILNLGTYAER-VISEEHPITSLSVSVDCKNFIVNLNSQEIHMWDVAGKWEKPFKYTGHSQNKYVIRSCFGGLDGTFITSGSENSQIYIWNRRN 715
            +G  LA+ S D + IIW+V  D+ L  L  TL  H   VS++AWSPDD  L+ CG  +   L LW+V TG  +      H   ++S  W PD KR V G    +   + CD DGN + +W G R+  +  L+   DG+ +++  + + IR  N     +R ++ E+HPI S ++S + +  ++N+ +Q +H+WD+  +     KY G +Q  Y I SCFGG +  FI SGSE+ ++YIW++R+
Sbjct:  366 DGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQ--FYQCDLDGNLLDSWEGVRVQCLWCLS---DGKTVLASDTHQRIRGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDR-VLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRS 602          
BLAST of FC923455 vs. ExPASy Swiss-Prot
Match: WDR26_XENTR (WD repeat-containing protein 26 OS=Xenopus tropicalis GN=wdr26 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 6.074e-36
Identity = 87/243 (35.80%), Postives = 139/243 (57.20%), Query Frame = 2
Query:    2 NGEYLASSSSDCSAIIWKVLEDS-KLTLKHTLRSHQNPVSFVAWSPDDTKLLTCG--NAEVLKLWDVGTGICKHTFGD-HGFIVSSCTWFPDSKRLVCGSSDTEKGIFMCDCDGNEIKAWRGTRIPKVLDLAVTPDGENLISVLSDKDIRILNLGTYAER-VISEEHPITSLSVSVDCKNFIVNLNSQEIHMWDVAGKWEKPFKYTGHSQNKYVIRSCFGGLDGTFITSGSENSQIYIWNRRN 715
            +G  LA+ S D + IIW+V  D+ +L L  TL  H   VS++AWSPDD  L+ CG  +   L LW+V TG  +      H   ++S  W PD KR V G    +   + CD DGN + +W G R+  +  L+   DG+ +++  + + IR  N     +R ++ E+HPI S ++S + +  ++N+ +Q +H+WD+  +     KY G +Q  Y I SCFGG +  FI SGSE+ ++Y+W++R+
Sbjct:  319 DGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYLAWSPDDNYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQ--FYQCDLDGNLLDSWEGVRVQCLWCLS---DGKTVLASDTHQRIRGYNFEDLTDRNIVQEDHPIMSFTISRNGRLALLNVATQGVHLWDLQDR-VLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYVWHKRS 555          
BLAST of FC923455 vs. ExPASy Swiss-Prot
Match: WDR26_DANRE (WD repeat-containing protein 26 OS=Danio rerio GN=wdr26 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.036e-35
Identity = 87/243 (35.80%), Postives = 138/243 (56.79%), Query Frame = 2
Query:    2 NGEYLASSSSDCSAIIWKVLEDS-KLTLKHTLRSHQNPVSFVAWSPDDTKLLTCG--NAEVLKLWDVGTGICKHTFGD-HGFIVSSCTWFPDSKRLVCGSSDTEKGIFMCDCDGNEIKAWRGTRIPKVLDLAVTPDGENLISVLSDKDIRILNLGTYAER-VISEEHPITSLSVSVDCKNFIVNLNSQEIHMWDVAGKWEKPFKYTGHSQNKYVIRSCFGGLDGTFITSGSENSQIYIWNRRN 715
            +G  LA+ S D + IIW+V  D+ +L L  TL  H   VS++AWSPDD  L+ CG  +   L LW+V TG  +      H   ++S  W PD KR V G    +   + CD DGN +++W G R+  +  +    DG  +++  + + IR  +     +R ++ E+HPI S +VS + +  ++N+ +Q +H+WD+  +     KY G +Q  Y I SCFGG +  FI SGSE+ ++YIW++R+
Sbjct:  278 DGTKLATGSKDTTVIIWQVEPDTHQLKLLRTLEGHAYGVSYLAWSPDDVYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQ--FYQCDLDGNLLESWEGVRVQCLWCMG---DGRTVLASDTHQRIRGYSFEDLTDRNIVQEDHPIMSFTVSKNGRLALLNVATQGVHLWDLQDR-VLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRS 514          
BLAST of FC923455 vs. ExPASy Swiss-Prot
Match: YIPC_SCHPO (Uncharacterized WD repeat-containing protein C343.04c OS=Schizosaccharomyces pombe GN=SPAC343.04c PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.920e-30
Identity = 89/248 (35.89%), Postives = 124/248 (50.00%), Query Frame = 2
Query:    2 NGEYLASSSSDCSAIIWKVLEDSKLTLKHTLR--SHQNPVSFVAWSPDDTKLLTCGNAEVLKLWDVGTGICKHTFGDHGFIVSSCTWFPDSKRLVCGSSDTEKGIFMCDCDGNEIKAWRGTRIPKVLDLAVTPDGENLISV-------LSDKDIRILNLGTY-AERVISEEHPITSLSVSVDCKNFIVNLNSQEIHMWDVAGKWEKPFKYTGHSQNKYVIRSCFGGLDGTFITSGSENSQIYIWNRRN 715
            NG YLAS+S D +AII+ V+      LK   R   H + V+++ WSPDD  LL+C   + + LWD  TG     +  HGF VS C W PD    + GS D    I     +G  +  W    I    D+A+T DG  L  V         DK I I ++ T    + IS +  +TS+ +S D K  + NL      +WD+        +Y GH    ++I SCFGG D TF+ SGSE+ +I IW+R +
Sbjct:  224 NGRYLASASKDKTAIIFDVVN-----LKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWDAFTGEKLRDY-KHGFSVSCCCWLPDGLSFITGSPDCH--ITHWSLNGEILYKWEDVNI---YDMALTSDGTKLYIVGFEQLINAEDKHIAIYSVETRECIKKISLQSKVTSICLSKDSKYALTNLEPHTTFLWDLEEN-RIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRES 459          
BLAST of FC923455 vs. ExPASy Swiss-Prot
Match: WDR26_DROME (WD repeat-containing protein 26 homolog OS=Drosophila melanogaster GN=CG7611 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.698e-26
Identity = 78/244 (31.97%), Postives = 129/244 (52.87%), Query Frame = 2
Query:    2 NGEYLASSSSDCSAIIWKVLEDSKLTLKHTL---RSHQNPVSFVAWSPDDTKLLTCG--NAEVLKLWDVGTGICKHTFGDHGFIVSSCTWFP-DSKRLVCGSSDTEKG-IFMCDCDGNEIKAWRGTRIPKVLDLAVTPDGENLISVLSDKDIRILNLGTYAER--VISEEHPITSLSVSVDCKNFIVNLNSQEIHMWDVAGKWEKPFKYTGHSQNKYVIRSCFGGLDGTFITSGSENSQIYIWN 706
            +G  LA+ S D + IIW V +  KLTLKH        Q  VSFV+WSPD   +L  G  ++  L +W+V  G     F        +C  F  D  R VCG    +KG +++CD +G  + +W G R+  +   A   D + +++  +   IR  N  +      ++ E HPI + S++   +  ++N+++Q +H+WD+  K     ++ G  Q+ + I SCFGG++ +F+ SGSE+  +YIW+
Sbjct:  325 DGLKLATGSKDSTVIIWDV-DPYKLTLKHRRVLDGQAQLSVSFVSWSPDSKLILVGGTEDSHELYIWNVDDGKLVVKFSQSLEDSLACGAFSRDGARFVCGG---QKGQLYLCDLNGTIVDSWEGVRVNSI---AFRADNKTILAADNHYRIRGYNFDSPRSDFDILREPHPIMTFSINSADRLALLNVSNQGLHLWDIEDKCLVR-RFQGIRQSNFAIHSCFGGVNESFVASGSEDKVVYIWH 560          
BLAST of FC923455 vs. ExPASy Swiss-Prot
Match: YZLL_CAEEL (Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.403e-24
Identity = 75/238 (31.51%), Postives = 120/238 (50.42%), Query Frame = 2
Query:    2 NGEYLASSSSDCSAIIWKVLEDSKLTLKHTLRSHQNPVSFVAWSPDDTKLLTCGNAEVLKLWDVGTGICKHTFGDHGFIVSSCTWFPDSKRLVCGSSDTEKGIFMCDCDGNEIKAWRGTRIPKVLDLAVTPDGENLISVLSDKDIRILN--LGTYAERVISEEH-PITSLSVSVDCKNFIVNLNSQEIHMWDVAGKWEKPFKYTGHSQNKYVIRSCFGGLDGTFITSGSENSQIYIWN 706
            +G Y+ S S+DCS  IW++        + TL  H+  ++  +WS D   +++C + +++K++DV +G C  T   H   V  C + P    +  GS D    I+ C  +GN I +  G   P V  +    DG  L S   D  +RI +   GT  + +I EEH PIT +  S + K  + +  +  + +WD   K     +YTGH  +KY + + F    G +I SGSE+ ++YIWN
Sbjct:  118 DGRYMGSGSADCSIKIWRM----DFVYEKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIW-CARNGNTIFSIPGHEDP-VSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNTLKLWDYQ-KLRVLKEYTGHENSKYCVAANFSVTGGKWIVSGSEDHKVYIWN 348          
BLAST of FC923455 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21
Identity = 73/239 (30.54%), Postives = 114/239 (47.70%), Query Frame = 2
Query:    2 NGEYLASSSSDCSAIIWKVLEDSKLTLKHTLRSHQNPVSFVAWSPDDTKLLTCGNAEVLKLWDVGTGICKHTFGDHGFIVSSCTWFPDSKRLVCGSSDTEKGIFMCDCDGNEIKAWRGTRIPKVLDLAVTPDGENLISVLSDKDIRILNL--GTYAERVISEEH-PITSLSVSVDCKNFIVNLNSQEIHMWDVA-GKWEKPFKYTGHSQNKYVIRSCFGGLDGTFITSGSENSQIYIWN 706
            NGE+LASSS+D    IW   +      + T+  H+  +S VAWS D   L++  + + LK+WDV +G C  T   H   V  C + P S  +V GS D  + + + D    +           V  +    DG  ++S   D   RI +   G   + +I +++ P++ +  S + K  +       + +WD + GK  K   YTGH   KY I + F    G +I SGSE++ +YIWN
Sbjct:   56 NGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD--ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK--TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287          
BLAST of FC923455 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21
Identity = 73/239 (30.54%), Postives = 114/239 (47.70%), Query Frame = 2
Query:    2 NGEYLASSSSDCSAIIWKVLEDSKLTLKHTLRSHQNPVSFVAWSPDDTKLLTCGNAEVLKLWDVGTGICKHTFGDHGFIVSSCTWFPDSKRLVCGSSDTEKGIFMCDCDGNEIKAWRGTRIPKVLDLAVTPDGENLISVLSDKDIRILNL--GTYAERVISEEH-PITSLSVSVDCKNFIVNLNSQEIHMWDVA-GKWEKPFKYTGHSQNKYVIRSCFGGLDGTFITSGSENSQIYIWN 706
            NGE+LASSS+D    IW   +      + T+  H+  +S VAWS D   L++  + + LK+WDV +G C  T   H   V  C + P S  +V GS D  + + + D    +           V  +    DG  ++S   D   RI +   G   + +I +++ P++ +  S + K  +       + +WD + GK  K   YTGH   KY I + F    G +I SGSE++ +YIWN
Sbjct:   56 NGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD--ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK--TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287          
BLAST of FC923455 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21
Identity = 73/239 (30.54%), Postives = 114/239 (47.70%), Query Frame = 2
Query:    2 NGEYLASSSSDCSAIIWKVLEDSKLTLKHTLRSHQNPVSFVAWSPDDTKLLTCGNAEVLKLWDVGTGICKHTFGDHGFIVSSCTWFPDSKRLVCGSSDTEKGIFMCDCDGNEIKAWRGTRIPKVLDLAVTPDGENLISVLSDKDIRILNL--GTYAERVISEEH-PITSLSVSVDCKNFIVNLNSQEIHMWDVA-GKWEKPFKYTGHSQNKYVIRSCFGGLDGTFITSGSENSQIYIWN 706
            NGE+LASSS+D    IW   +      + T+  H+  +S VAWS D   L++  + + LK+WDV +G C  T   H   V  C + P S  +V GS D  + + + D    +           V  +    DG  ++S   D   RI +   G   + +I +++ P++ +  S + K  +       + +WD + GK  K   YTGH   KY I + F    G +I SGSE++ +YIWN
Sbjct:   56 NGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD--ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK--TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287          
The following BLAST results are available for this feature:
BLAST of FC923455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
WDR26_MOUSE4.650e-3635.80WD repeat-containing protein 26 OS=Mus musculus GN... [more]
WDR26_HUMAN4.650e-3636.21WD repeat-containing protein 26 OS=Homo sapiens GN... [more]
WDR26_XENTR6.074e-3635.80WD repeat-containing protein 26 OS=Xenopus tropica... [more]
WDR26_DANRE1.036e-3535.80WD repeat-containing protein 26 OS=Danio rerio GN=... [more]
YIPC_SCHPO2.920e-3035.89Uncharacterized WD repeat-containing protein C343.... [more]
WDR26_DROME5.698e-2631.97WD repeat-containing protein 26 homolog OS=Drosoph... [more]
YZLL_CAEEL1.403e-2431.51Uncharacterized WD repeat-containing protein K04G1... [more]
WDR5_RAT4.226e-2130.54WD repeat-containing protein 5 OS=Rattus norvegicu... [more]
WDR5_MOUSE4.226e-2130.54WD repeat-containing protein 5 OS=Mus musculus GN=... [more]
WDR5_HUMAN4.226e-2130.54WD repeat-containing protein 5 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31705C03EF StrClemenN Citrus clementina cDNA clone C31705C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923455 ID=FC923455; Name=FC923455; organism=Citrus clementina; type=EST; length=723bp
CAATGGAGAGTACTTAGCATCTTCATCAAGTGACTGCTCAGCCATCATAT
GGAAGGTGCTGGAAGACAGTAAACTGACATTGAAACACACTCTCCGAAGC
CACCAGAACCCAGTTTCCTTTGTGGCATGGAGCCCTGATGACACAAAGTT
GCTCACATGTGGAAATGCAGAAGTTCTCAAGCTGTGGGATGTGGGAACAG
GTATCTGCAAGCATACATTTGGGGATCATGGCTTCATTGTCAGCTCATGT
ACTTGGTTTCCGGACTCAAAGCGACTTGTCTGTGGCAGTTCTGACACTGA
GAAGGGCATCTTCATGTGCGACTGTGATGGGAACGAGATAAAAGCATGGA
GGGGGACGAGGATTCCCAAGGTTTTGGATCTTGCTGTGACACCAGATGGG
GAAAATCTTATCAGCGTTTTATCAGATAAAGATATTCGGATACTAAATTT
GGGGACATATGCTGAGAGGGTCATCTCTGAGGAGCACCCAATCACATCCC
TGTCGGTTTCGGTAGATTGTAAGAACTTCATTGTCAACTTAAACAGCCAA
GAGATCCACATGTGGGATGTTGCTGGAAAATGGGAAAAACCATTTAAGTA
TACGGGCCACAGCCAAAACAAATATGTGATACGGTCCTGCTTTGGTGGCT
TGGATGGTACATTTATTACCAGTGGCAGTGAGAATTCTCAGATCTACATT
TGGAATCGGCGAAACTCNTAACC
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