FC923526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_ARATH (Protein CutA, chloroplastic OS=Arabidopsis thaliana GN=CUTA PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 8.577e-51 Identity = 105/147 (71.43%), Postives = 123/147 (83.67%), Query Frame = 1 Query: 13 SSSLKTGSAPS---LPFFGSKFSNQARAKSSNTIKMEGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTRD 444 SS K+G A S +P SKFS++A S++I+ME +S TVPSIVVYVTVP++EAGKKLA SIV+ KLAACVN VPGIESVYEW+G++Q+D+EELLIIKTRQSLLE LTEHV ANHEYD PEVIALPITGGS YLEWLK+STR+ Sbjct: 39 SSPFKSGCAQSFSVVPLLRSKFSSKA---FSSSIRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIESVYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYLEWLKNSTRN 182
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA1_ORYSJ (Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CUTA1 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.361e-46 Identity = 91/126 (72.22%), Postives = 105/126 (83.33%), Query Frame = 1 Query: 67 FSNQARAKSSNTIKMEGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTRD 444 F+ SS + +ME S TVPSIVVYVTVP+KEAGK+LA SI+ KLAACVN VPGIESVY W+G++QTDAEELLIIKTR+SLL+ LTEHVKANHEYD PEVIALPI GG+ YLEWLK+STR+ Sbjct: 51 FAGVRSLSSSASARMESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKVQTDAEELLIIKTRESLLDALTEHVKANHEYDVPEVIALPIKGGNLKYLEWLKNSTRE 176
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_HUMAN (Protein CutA OS=Homo sapiens GN=CUTA PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.525e-23 Identity = 50/111 (45.05%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 112 EGNSNTVPSIV--VYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSST 438 + S VP V +VT P+++ K++A ++V+ +LAACVN +P I S+YEWKG+I+ D+E L++IKT+ SL+ LT+ V++ H Y+ EVIALP+ G+ PYL+W++ T Sbjct: 58 DSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVT 168
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_RAT (Protein CutA OS=Rattus norvegicus GN=Cuta PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 1.991e-23 Identity = 59/147 (40.14%), Postives = 86/147 (58.50%), Query Frame = 1 Query: 4 PTLSSSLKTGSAPSLPFFGSKFSNQARAKSSNTIKMEGNSNTVPSIV--VYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSST 438 P S+ +GS PS P S S VP V +VT P+++ K++A ++V+ +LAACVN +P I S+YEWKG+I+ D+E L++IKT+ SL+ LTE V++ H Y+ EVIALP+ G+ PYL W+ T Sbjct: 38 PRALLSMASGSPPSQPSPAS------------------GSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTEFVRSVHPYEVAEVIALPVEQGNPPYLHWVHQVT 166
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_MOUSE (Protein CutA OS=Mus musculus GN=Cuta PE=2 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 2.601e-23 Identity = 51/108 (47.22%), Postives = 76/108 (70.37%), Query Frame = 1 Query: 121 SNTVPSIV--VYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSST 438 S VP V +VT P+++ K++A ++V+ +LAACVN +P I S+YEWKG+I+ D+E L++IKT+ SL+ LTE V++ H Y+ EVIALP+ G+ PYL W+ T Sbjct: 59 SGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTEFVRSVHPYEVAEVIALPVEQGNPPYLHWVHQVT 166
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_THET8 (Divalent-cation tolerance protein cutA OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=cutA PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.396e-23 Identity = 48/99 (48.48%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 142 VVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSST 438 VV +TVPS+E + +A+++V+ +LAACVN VPG+ S+Y W+GE+ D E LL++KT L E VKA H Y PE++ALPI G++ YL+WL+ +T Sbjct: 4 VVLITVPSEEVARTIAKALVEERLAACVNIVPGLTSIYRWQGEVVEDQELLLLVKTTTHAFPKLKERVKALHPYTVPEIVALPIAEGNREYLDWLRENT 102
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_XENLA (Protein CutA homolog OS=Xenopus laevis GN=cuta PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.202e-22 Identity = 48/93 (51.61%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 148 YVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWL 426 YVT P+ K +A +V+ KLAACVN +P I S+YEWKG+++ D E LL+IKTR S + LTE+V++ H Y+ EVI+LPI G+ PYL+W+ Sbjct: 53 YVTCPNDTVAKDIARGLVERKLAACVNVIPQITSIYEWKGKLEEDTEVLLMIKTRSSKVSALTEYVRSVHPYEVCEVISLPIEQGNPPYLKWV 145
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_BOVIN (Protein CutA OS=Bos taurus GN=CUTA PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22 Identity = 55/145 (37.93%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 4 PTLSSSLKTGSAPSLPFFGSKFSNQARAKSSNTIKMEGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSST 438 P S+ +GS P+ P + SS + + G+ + +VT P+++ K++A ++V+ +LA CVN VP I S+YEWKG+I+ D+E L++IKT+ SL+ LT+ V++ H Y+ EVIALP+ G+ PYL+W++ T Sbjct: 38 PRALLSMASGSPPAQP-----------SSSSRSAYVPGSVSAA-----FVTCPNEKVAKEIARAVVEKRLA-CVNLVPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPYEVAEVIALPVEQGNSPYLQWVRQVT 165
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_ERWCT (Divalent-cation tolerance protein cutA OS=Erwinia carotovora subsp. atroseptica GN=cutA PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 6.629e-19 Identity = 39/102 (38.24%), Postives = 65/102 (63.73%), Query Frame = 1 Query: 136 SIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTR 441 ++V+ T P ++LA S+++ +LAACV +PG S+Y W+G+++ +E ++IK+ S + L H+K H YD PE++ LP++GG YL WL +S R Sbjct: 9 AVVILCTAPDDACAQRLANSLLETRLAACVTLLPGARSLYYWEGKLEQQSEVQMLIKSDTSHQQALLTHLKQQHPYDTPELLVLPVSGGDSDYLTWLNASLR 110
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_SHISS (Divalent-cation tolerance protein cutA OS=Shigella sonnei (strain Ss046) GN=cutA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18 Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 112 EGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTR 441 E +SNT S+VV T P + + LA ++ KLAAC +PG S+Y W+G+++ + E +I+KT S + L E +K++H Y PE++ LP+T G YL WL +S R Sbjct: 4 EKSSNTA-SVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112 The following BLAST results are available for this feature:
BLAST of FC923526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923526 ID=FC923526; Name=FC923526; organism=Citrus clementina; type=EST; length=618bpback to top |