FC923855
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923855 vs. ExPASy Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.716e-51 Identity = 94/139 (67.63%), Postives = 108/139 (77.70%), Query Frame = 2 Query: 251 MAPGGGICKEVIESSIEFSDYEMATSSVELRGSPCRKATTGFSGNLGTTSNNDVHELLECPVCLNLMYPPIYQCPNGHTLCSSCKARVRTGCPTCRHELGNIRCLALEKVAESLELPCRYQIWGCQDIFPYYSKLKHEK 667 MAPGG KEV+ES+ DYE+ T+ VE+ + K + G G SNN V+ELLECPVC NLMYPPI+QCPNGHTLCS+CK RV+ CPTCR+ELGNIRCLALEKVAESLE+PCRYQ GC DIFPYYSKLKHE+ Sbjct: 1 MAPGGSALKEVMESNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQ 139
BLAST of FC923855 vs. ExPASy Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.561e-49 Identity = 94/140 (67.14%), Postives = 108/140 (77.14%), Query Frame = 2 Query: 251 MAPGGGICKEVIESSIEFSDYEMATSSVELRGSPCRKATTGFSGNLGTT-SNNDVHELLECPVCLNLMYPPIYQCPNGHTLCSSCKARVRTGCPTCRHELGNIRCLALEKVAESLELPCRYQIWGCQDIFPYYSKLKHEK 667 MAPGG KE +ES+ DYE+ + VE P + SG++G S+N V+ELLECPVC NLMYPPI+QCPNGHTLCSSCK RV+ CPTCR+ELGNIRCLALEKVAESLE+PCRYQ GCQDIFPYYSKLKHE+ Sbjct: 1 MAPGGSALKEALESNSTGVDYEVKMAKVEANSKPTKSG----SGSIGKFHSSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQ 136
BLAST of FC923855 vs. ExPASy Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.154e-38 Identity = 73/96 (76.04%), Postives = 81/96 (84.38%), Query Frame = 2 Query: 377 SGNLGTTSNNDVHELLECPVCLNLMYPPIYQCPNGHTLCSSCKARVRTGCPTCRHELGNIRCLALEKVAESLELPCRYQIWGCQDIFPYYSKLKHE 664 SG L TT++ VHELLECPVC N MYPPI+QC NGHTLCS+CKARV CPTCR ELG+IRCLALEKVAESLELPC++ GC +IFPYYSKLKHE Sbjct: 48 SGLLPTTTS--VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKHMSLGCPEIFPYYSKLKHE 141
BLAST of FC923855 vs. ExPASy Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.377e-36 Identity = 69/107 (64.49%), Postives = 77/107 (71.96%), Query Frame = 2 Query: 344 GSPCRKATTGFSGNLGTTSNNDVHELLECPVCLNLMYPPIYQCPNGHTLCSSCKARVRTGCPTCRHELGNIRCLALEKVAESLELPCRYQIWGCQDIFPYYSKLKHE 664 G+ T G T V+ELLECPVC MYPPI+QC NGHTLCS+CK RV CPTCR ELG+IRCLALEKVAESLELPC++ GC +IFPYYSKLKHE Sbjct: 36 GAAAAAVVTNIVGPTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHE 142
BLAST of FC923855 vs. ExPASy Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36 Identity = 67/85 (78.82%), Postives = 73/85 (85.88%), Query Frame = 2 Query: 410 VHELLECPVCLNLMYPPIYQCPNGHTLCSSCKARVRTGCPTCRHELGNIRCLALEKVAESLELPCRYQIWGCQDIFPYYSKLKHE 664 V+ELLECPVC N MYPPI+QC NGHTLCS+CK+RV CPTCR ELG+IRCLALEKVAESLELPC+Y GC IFPYYSKLKHE Sbjct: 40 VYELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYSKLKHE 124
BLAST of FC923855 vs. ExPASy Swiss-Prot
Match: SINA_SCHMA (E3 ubiquitin-protein ligase sina OS=Schistosoma mansoni GN=SINA PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.023e-22 Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 2 Query: 320 ATSSVELRGSPCRKATTGFS---GNLGTTSNNDVHELLECPVCLNLMYPPIYQCPNGHTLCSSCKARVRTGCPTCRHELGNIRCLALEKVAESLELPCRYQIWGCQDIFPYYSKLKHE 664 +T S+ L GS + T + N +S+ D+ L ECPVC++ PPI QC +GH +C+SC++++ + CPTCR L NIR LA+EK+A S+ PC+Y GC + F Y SK +HE Sbjct: 87 STCSMSLPGSMSSASDTVCNILPHNTSDSSSIDLASLFECPVCMDYALPPIMQCQSGHIVCASCRSKL-SSCPTCRGNLDNIRNLAMEKLASSVLFPCKYSTSGCPETFHYTSKSEHE 203 HSP 2 Score: 24.6386 bits (52), Expect = 1.023e-22 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 1 Query: 670 CNYRPYNCP 696 C YRPY+CP Sbjct: 206 CEYRPYDCP 214
BLAST of FC923855 vs. ExPASy Swiss-Prot
Match: SIA1B_MOUSE (E3 ubiquitin-protein ligase SIAH1B OS=Mus musculus GN=Siah1b PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.627e-22 Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 392 TTSNNDVHELLECPVCLNLMYPPIYQCPNGHTLCSSCKARVRTGCPTCRHELGNIRCLALEKVAESLELPCRYQIWGCQDIFPYYSKLKHEK 667 T SNND+ L ECPVC + + PPI QC +GH +CS+C+ ++ T CPTCR LG+IR LA+EKVA S+ PC+Y GC+ P+ K +HE+ Sbjct: 29 TASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAVEKVANSVLFPCKYSASGCEITLPHTKKAEHEE 119
BLAST of FC923855 vs. ExPASy Swiss-Prot
Match: SIAH1_RAT (E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus GN=Siah1 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 392 TTSNNDVHELLECPVCLNLMYPPIYQCPNGHTLCSSCKARVRTGCPTCRHELGNIRCLALEKVAESLELPCRYQIWGCQDIFPYYSKLKHEK 667 T SNND+ L ECPVC + + PPI QC +GH +CS+C+ ++ T CPTCR LG+IR LA+EKVA S+ PC+Y GC+ P+ K +HE+ Sbjct: 29 TASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKAEHEE 119
BLAST of FC923855 vs. ExPASy Swiss-Prot
Match: SIA1A_MOUSE (E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus GN=Siah1a PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 392 TTSNNDVHELLECPVCLNLMYPPIYQCPNGHTLCSSCKARVRTGCPTCRHELGNIRCLALEKVAESLELPCRYQIWGCQDIFPYYSKLKHEK 667 T SNND+ L ECPVC + + PPI QC +GH +CS+C+ ++ T CPTCR LG+IR LA+EKVA S+ PC+Y GC+ P+ K +HE+ Sbjct: 29 TASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKAEHEE 119
BLAST of FC923855 vs. ExPASy Swiss-Prot
Match: SIAH1_HUMAN (E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens GN=SIAH1 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 2 Query: 392 TTSNNDVHELLECPVCLNLMYPPIYQCPNGHTLCSSCKARVRTGCPTCRHELGNIRCLALEKVAESLELPCRYQIWGCQDIFPYYSKLKHEK 667 T SNND+ L ECPVC + + PPI QC +GH +CS+C+ ++ T CPTCR LG+IR LA+EKVA S+ PC+Y GC+ P+ K HE+ Sbjct: 29 TASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEE 119 The following BLAST results are available for this feature:
BLAST of FC923855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923855 ID=FC923855; Name=FC923855; organism=Citrus clementina; type=EST; length=698bpback to top |