FC923856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923856 vs. ExPASy Swiss-Prot
Match: RL8_SOLLC (60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1) HSP 1 Score: 469.544 bits (1207), Expect = 8.388e-132 Identity = 219/230 (95.22%), Postives = 228/230 (99.13%), Query Frame = 3 Query: 66 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAP 755 MGRVIRAQRKGAGSVFKSHTHHRKGPARFR+LDFGERNGYLKGVITE+IHDPGRGAPLARVTFRHPFRY+HQKELFVAAEGMYTGQFVYCG+KATL+VGNVLPLRSIPEGAVVCNVEH VGDRGVFARCSGDYA+VISHNPDN TTR+KLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAP Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAP 230
BLAST of FC923856 vs. ExPASy Swiss-Prot
Match: RL83_ARATH (60S ribosomal protein L8-3 OS=Arabidopsis thaliana GN=RPL8C PE=2 SV=2) HSP 1 Score: 461.455 bits (1186), Expect = 2.284e-129 Identity = 214/230 (93.04%), Postives = 227/230 (98.70%), Query Frame = 3 Query: 66 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAP 755 MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+TEIIHDPGRGAPLARV FRHPFR++ QKELFVAAEGMYTGQF+YCG+KATLVVGNVLPLRSIPEGAV+CNVEHHVGDRGVFAR SGDYA+VI+HNPDNDT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAP Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAP 230
BLAST of FC923856 vs. ExPASy Swiss-Prot
Match: RL8_TOBAC (60S ribosomal protein L8 OS=Nicotiana tabacum GN=RPL8 PE=2 SV=1) HSP 1 Score: 458.759 bits (1179), Expect = 1.481e-128 Identity = 215/230 (93.48%), Postives = 224/230 (97.39%), Query Frame = 3 Query: 66 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAP 755 MGR+IRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITE+IHDPGRGAPLARVTFR+PFRY HQKELFVAAEGMYTGQFVYCG+KATL+VGNVLPLRSIPEGAVVCNVEH VGDRGVFARCSG YA+VISHNPDN TTRIKLPSG+KKIVPSGCR MIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV RDAP Sbjct: 1 MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAP 230
BLAST of FC923856 vs. ExPASy Swiss-Prot
Match: RL81_ARATH (60S ribosomal protein L8-1 OS=Arabidopsis thaliana GN=RPL8A PE=2 SV=2) HSP 1 Score: 457.218 bits (1175), Expect = 4.308e-128 Identity = 214/230 (93.04%), Postives = 226/230 (98.26%), Query Frame = 3 Query: 66 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAP 755 MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+TEIIHDPGRGAPLARVTFRHPFR++ QKELFVAAEGMYTGQF+YCG+KATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGV AR SGDYA+VI+HNPD+DTTRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAP Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAP 230
BLAST of FC923856 vs. ExPASy Swiss-Prot
Match: RL82_ARATH (60S ribosomal protein L8-2 OS=Arabidopsis thaliana GN=RPL8B PE=2 SV=2) HSP 1 Score: 422.55 bits (1085), Expect = 1.176e-117 Identity = 196/229 (85.59%), Postives = 215/229 (93.89%), Query Frame = 3 Query: 66 MGRVIRAQRKGA-GSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRD 749 MGRVIRAQRKGA GSVFKSHTHHRKGPA+FRSLD+GERNGYLKG++TEIIHDPGRGAPLARV FRHPFRY QKELFVAAEGMYTGQ++YCG+KA L+VGNVLPL SIPEGAV+CNVE HVGDRG AR SGDYA+VI+HNP+++TTR+KLPSG+KKI+PS CRAMIGQVAGGGRTEKP LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLARVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPFLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRD 229
BLAST of FC923856 vs. ExPASy Swiss-Prot
Match: RL8_ANOGA (60S ribosomal protein L8 OS=Anopheles gambiae GN=RpL8 PE=2 SV=2) HSP 1 Score: 359.377 bits (921), Expect = 1.223e-98 Identity = 166/230 (72.17%), Postives = 194/230 (84.35%), Query Frame = 3 Query: 66 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAP 755 MGRVIRAQRKGAGSVF++HT RKG + R LD+ ER+GYLKGV+ +IIHDPGRGAPLA V FR P+R++ K+LF+AAEGMYTGQFVYCGR+A L +GNVLP+ +PEG +VCN+E GDRG AR SG+YA VI+HNPD TR+KLPSGAKK++PS RAMIG VAGGGR +KP+LKAG AYHK++VKRNCWPKVRGVAMNPVEHPHGGGNHQHIG ASTV+R P Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGEPKLRHLDYAERHGYLKGVVKQIIHDPGRGAPLAVVNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVLPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMIGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTP 230
BLAST of FC923856 vs. ExPASy Swiss-Prot
Match: RL8_DROME (60S ribosomal protein L8 OS=Drosophila melanogaster GN=RpL8 PE=2 SV=1) HSP 1 Score: 356.295 bits (913), Expect = 1.035e-97 Identity = 165/227 (72.69%), Postives = 193/227 (85.02%), Query Frame = 3 Query: 66 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRR 746 MGRVIRAQRKGAGSVFK+H RKG A+ RSLDF ER+GY++GV+ +IIHDPGRGAPLA V FR P+RY+ +KELF+A EGM+TGQFVYCGRKATL +GNV+PL +PEG ++CN+E GDRG AR SG+YA VI+HN D TR+KLPSGAKK+VPS RAM+G VAGGGR +KP+LKAG AYHK++VKRN WPKVRGVAMNPVEHPHGGGNHQHIG ASTV+R Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKR 227
BLAST of FC923856 vs. ExPASy Swiss-Prot
Match: RL8_XENLA (60S ribosomal protein L8 OS=Xenopus laevis GN=rpl8 PE=2 SV=3) HSP 1 Score: 353.214 bits (905), Expect = 8.761e-97 Identity = 159/230 (69.13%), Postives = 194/230 (84.35%), Query Frame = 3 Query: 66 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAP 755 MGRVIR QRKGAGSVFK+H HRKG A+ R++DF ERNGY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELFVAAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC VE GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAP 230
BLAST of FC923856 vs. ExPASy Swiss-Prot
Match: RL8_SPOFR (60S ribosomal protein L8 OS=Spodoptera frugiperda GN=RpL8 PE=2 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 3.329e-96 Identity = 161/227 (70.93%), Postives = 193/227 (85.02%), Query Frame = 3 Query: 66 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRR 746 MGRVIRAQRKGAGSVF SHT RKG + RSLD+ ER+GY+KGV+ +IIHDPGRGAPLA V FR P++++ +KELF+A EG+YTGQFVYCG+KATL VGNV+P+ ++PEG +VCN+E +GDRG AR SG++A VI HNPD TR+KLPSGAKK++PS R M+G VAGGGR +KP+LKAG AYHK++VKRNCWP VRGVAMNPVEHPHGGGNHQHIG ASTV+R Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKR 227
BLAST of FC923856 vs. ExPASy Swiss-Prot
Match: RL8_MAMBR (60S ribosomal protein L8 OS=Mamestra brassicae GN=RpL8 PE=2 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 3.329e-96 Identity = 161/227 (70.93%), Postives = 193/227 (85.02%), Query Frame = 3 Query: 66 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRR 746 MGRVIRAQRKGAGSVF SHT RKG + RSLD+ ER+GY+KGV+ +IIHDPGRGAPLA V FR P++++ +KELF+A EG+YTGQFVYCG+KATL VGNV+P+ ++PEG +VCN+E +GDRG AR SG++A VI HNPD TR+KLPSGAKK++PS R M+G VAGGGR +KP+LKAG AYHK++VKRNCWP VRGVAMNPVEHPHGGGNHQHIG ASTV+R Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKR 227 The following BLAST results are available for this feature:
BLAST of FC923856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923856 ID=FC923856; Name=FC923856; organism=Citrus clementina; type=EST; length=756bpback to top |