FC923862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923862 vs. ExPASy Swiss-Prot
Match: SNX7_MOUSE (Sorting nexin-7 OS=Mus musculus GN=Snx7 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.295e-22 Identity = 61/161 (37.89%), Postives = 92/161 (57.14%), Query Frame = 2 Query: 122 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVE 598 L ++V P ++ +I+YR++TKT+ E+ E V RRY DF+WL+ +L E + + IPPLPEK V+ RF+ +FIE RR+ L F+NRIA HP L +ED K FL A E + + Y K+ P L ++ + V++ S + K +P E Sbjct: 32 LFITVDAPESHVTTIETFITYRIVTKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKVFLTAQAEEL-------SSYKKQGPGLLSRMGQTVRAVASSMRGVKNRPEE 185
BLAST of FC923862 vs. ExPASy Swiss-Prot
Match: SNX7_MACFA (Sorting nexin-7 OS=Macaca fascicularis GN=SNX7 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.124e-21 Identity = 61/164 (37.20%), Postives = 91/164 (55.49%), Query Frame = 2 Query: 122 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESN 607 L ++V +P ++ +I+YR+ITKT+ E+ E V RRY DF+WL+ +L E + + IPPLPEK V+ RF+ +FIE RR+ L F+NRIA HP L +ED K FL A + + Q G + + Q + V S + V E+ +E +N Sbjct: 32 LFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSR----MGQTVRAVASSMRGVKNRPEEFMEMNN 191
BLAST of FC923862 vs. ExPASy Swiss-Prot
Match: SNX7_HUMAN (Sorting nexin-7 OS=Homo sapiens GN=SNX7 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.124e-21 Identity = 61/164 (37.20%), Postives = 91/164 (55.49%), Query Frame = 2 Query: 122 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESN 607 L ++V +P ++ +I+YR+ITKT+ E+ E V RRY DF+WL+ +L E + + IPPLPEK V+ RF+ +FIE RR+ L F+NRIA HP L +ED K FL A + + Q G + + Q + V S + V E+ +E +N Sbjct: 32 LFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSR----MGQTVRAVASSMRGVKNRPEEFMEMNN 191
BLAST of FC923862 vs. ExPASy Swiss-Prot
Match: SNX30_XENTR (Sorting nexin-30 OS=Xenopus tropicalis GN=snx30 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.329e-21 Identity = 57/117 (48.72%), Postives = 71/117 (60.68%), Query Frame = 2 Query: 122 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 466 L V+V DP K ++ YI+YRV TKT E+ PE + RRY DF WLR++L E FIPPLPEK V+ RFS EF+E RR+ LD F+ RIA HP L +E FL A + Sbjct: 100 LFVTVDDPKKHVCTMETYITYRVSTKTTRTEFDLPEYSIRRRYQDFDWLRNKLEETQPTHFIPPLPEKFVVKGVVDRFSEEFVETRRKALDKFLKRIADHPVLSFNEHFNVFLTAKD 216
BLAST of FC923862 vs. ExPASy Swiss-Prot
Match: SNX1_PONAB (Sorting nexin-1 OS=Pongo abelii GN=SNX1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.187e-20 Identity = 49/125 (39.20%), Postives = 81/125 (64.80%), Query Frame = 2 Query: 122 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 466 L+V +TDP K+G+G+ AY++Y+V T+T+ P ++ + V RR+SDF+ L ++L EK+ G +PP PEKS + ++ SAEF+E RR L+ ++ RI +HP + Q D++ FL+ +E Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYIQRIVNHPTMLQDPDVREFLEKEE 269
BLAST of FC923862 vs. ExPASy Swiss-Prot
Match: SNX30_XENLA (Sorting nexin-30 OS=Xenopus laevis GN=snx30 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.025e-20 Identity = 57/117 (48.72%), Postives = 70/117 (59.83%), Query Frame = 2 Query: 122 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 466 L V+V DP K ++ YI+Y V TKT E+ PE V RRY DF WLR++L E FIPPLPEK V+ RFS EF+E RR+ LD F+ RIA HP L +E FL A + Sbjct: 106 LFVTVDDPKKHVCTMETYITYSVSTKTTRTEFDLPEYSVRRRYQDFDWLRNKLEETQPTHFIPPLPEKFVVKGVVDRFSEEFVETRRKALDKFLKRIADHPVLSFNEHFNVFLTAKD 222
BLAST of FC923862 vs. ExPASy Swiss-Prot
Match: SNX1_RAT (Sorting nexin-1 OS=Rattus norvegicus GN=Snx1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.025e-20 Identity = 49/125 (39.20%), Postives = 81/125 (64.80%), Query Frame = 2 Query: 122 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 466 L+V +TDP K+G+G+ AY++Y+V T+T+ P ++ + V RR+SDF+ L ++L EK+ G +PP PEKS + ++ SAEF+E RR L+ ++ RI +HP + Q D++ FL+ +E Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSRQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEE 269
BLAST of FC923862 vs. ExPASy Swiss-Prot
Match: SNX1_MOUSE (Sorting nexin-1 OS=Mus musculus GN=Snx1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.025e-20 Identity = 49/125 (39.20%), Postives = 81/125 (64.80%), Query Frame = 2 Query: 122 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 466 L+V +TDP K+G+G+ AY++Y+V T+T+ P ++ + V RR+SDF+ L ++L EK+ G +PP PEKS + ++ SAEF+E RR L+ ++ RI +HP + Q D++ FL+ +E Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSRQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEE 269
BLAST of FC923862 vs. ExPASy Swiss-Prot
Match: SNX1_MACFA (Sorting nexin-1 OS=Macaca fascicularis GN=SNX1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.025e-20 Identity = 49/125 (39.20%), Postives = 81/125 (64.80%), Query Frame = 2 Query: 122 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 466 L+V +TDP K+G+G+ AY++Y+V T+T+ P ++ + V RR+SDF+ L ++L EK+ G +PP PEKS + ++ SAEF+E RR L+ ++ RI +HP + Q D++ FL+ +E Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEE 269
BLAST of FC923862 vs. ExPASy Swiss-Prot
Match: SNX1_HUMAN (Sorting nexin-1 OS=Homo sapiens GN=SNX1 PE=1 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 2.025e-20 Identity = 49/125 (39.20%), Postives = 81/125 (64.80%), Query Frame = 2 Query: 122 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 466 L+V +TDP K+G+G+ AY++Y+V T+T+ P ++ + V RR+SDF+ L ++L EK+ G +PP PEKS + ++ SAEF+E RR L+ ++ RI +HP + Q D++ FL+ +E Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEE 269 The following BLAST results are available for this feature:
BLAST of FC923862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923862 ID=FC923862; Name=FC923862; organism=Citrus clementina; type=EST; length=610bpback to top |