FC923941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923941 vs. ExPASy Swiss-Prot
Match: XL3_GOSHI (UPF0497 membrane protein xl3 OS=Gossypium hirsutum GN=XL3 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.490e-19 Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 1 Query: 172 IEMDVQKIEAFVRVXXXXXXXXXXXXVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQ 465 +E+ +QKIEA +R+ +GLD+Q+K IFYV +K ++K+L AL L+Y+ S AA YNLLQL S F + Y G S SY YLAW+ Y+LDQ Sbjct: 1 MELSIQKIEALIRLSTIVMLVLTACLIGLDSQTKVIFYVQKKASFKDLRALVGLLYITSLAAAYNLLQLCCSSFSASYKGTSLQSYAYLAWLRYILDQ 98
BLAST of FC923941 vs. ExPASy Swiss-Prot
Match: U4978_SOYBN (UPF0497 membrane protein 8 OS=Glycine max PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.948e-12 Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 172 IEMDVQKIEAFVRVXXXXXXXXXXXXVGLDTQSKYIFY-VDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQVN-FPFLKLNSVKLRSYLKKILXSKSIFW 549 +++ + + E +RV V LDTQ+K +F +++K TYK+L+AL LVYV AAAGYNLL L + SR N KGSY +AW+ + LDQ+ + N+ + + + I S++ W Sbjct: 1 MKLGMARGEVCLRVSAILVLVLTACLVALDTQTKVVFVSIEKKATYKDLNALKILVYVTCAAAGYNLLLLCKHSIWSR--KNFKGSYLCMAWICFSLDQIAVYMTFAANTATMGAAVLAISGSEAFQW 126
BLAST of FC923941 vs. ExPASy Swiss-Prot
Match: U497D_VITVI (UPF0497 membrane protein 13 OS=Vitis vinifera GN=GSVIVT00031388001 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.567e-12 Identity = 45/132 (34.09%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 178 MDVQKIEAFVRVXXXXXXXXXXXXVGLDTQSKYIFYVDRKI-TYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGN-SKGSYRYLAWVSYLLDQVN-FPFLKLNSVKLRSYLKKILXSKSIFWKQKHN 564 + + + EAF+R+ +G DTQ+K +F +K T+++L AL +VYV S AAGYNLLQLGR ++ G SY L WV +LLDQ + N+ L++ + + S+ W + N Sbjct: 26 ISLARAEAFLRLFAILVLVLTACLLGFDTQTKLLFSTIKKTATFRDLGALQVVVYVDSVAAGYNLLQLGRGFISAKLKGKLINVSYVTLPWVCFLLDQAAVYTVFSANTAALQASIIAVTGESSLQWMKVCN 157 The following BLAST results are available for this feature:
BLAST of FC923941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923941 ID=FC923941; Name=FC923941; organism=Citrus clementina; type=EST; length=564bpback to top |