FC923942
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923942 vs. ExPASy Swiss-Prot
Match: TIPRL_DICDI (TIP41-like protein OS=Dictyostelium discoideum GN=tiprl PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.223e-22 Identity = 64/173 (36.99%), Postives = 100/173 (57.80%), Query Frame = 1 Query: 196 RRGLRIRGWEIESRKRSILNSSSVERWEQKLETNHLPEMVFGESCLVLKHVESGTKIHFNAFDALSGWKQEGLPPVEVPAAAQWKFRSKPFE-QLILDYDYTFTTPYCGSETIEMDTDKHGTRDNLDGSSSLHWEDCKEKIDVVALASKEPILFYDEVVLYEDELADXGVSLL 711 + G+ I W I + K IL S+ E WE++L N LPEMV+G + + L + + I FN DAL + ++V ++ +W+ +K FE Q+ +++TF++PY G+ + T H N + L +E+ EKID+ L +PILF+D+V+LYEDELAD G S+L Sbjct: 13 KNGIEIGDWVIHTSKNPILKSTEKEEWEKELVLNGLPEMVYGNNFIRLSNEKRDITIVFNCMDALKMLDKVADQSIKVSSSKKWEEINKGFEGQIEKSFEWTFSSPYTGT----ILTRGH-CYSNFEKPIGL-FENTTEKIDIEKLKRPDPILFFDDVLLYEDELADNGSSML 179
BLAST of FC923942 vs. ExPASy Swiss-Prot
Match: TIPRL_XENLA (TIP41-like protein OS=Xenopus laevis GN=tiprl PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16 Identity = 58/167 (34.73%), Postives = 92/167 (55.09%), Query Frame = 1 Query: 220 WEIESRKRSILNSSSVERWEQKLETNHLPEMVFGESCLVLKHVESGTKIHFNAFDALSGWKQEGLPPVEVPAAAQW---KFRSKPFEQLILDYDYTFTTPYCGSETIEMDTDKHGTRDNLDGSSSLHWEDCKEKIDVVALASKEPILFYDEVVLYEDELADXGVSLL 711 W++ + K I+ S+ VE+ +++ LPEM+FGE+ L ++H SG I FNA DAL K V+V A +W + S+ ++++ YD+T+TT Y G+ L + L+ E+I+ L +KE I+F++EV+L+EDEL D GVS L Sbjct: 18 WQLTAIKTHIMKSADVEKLAEEMSMPCLPEMMFGENVLRIQHT-SGFGIEFNANDALKVVKNSQ-GSVKVACAEEWQESRSDSEHSKEVVKPYDWTYTTDYKGTL--------------LGDNMKLNVVPTTERINTEKLKAKEQIMFFEEVLLFEDELHDHGVSSL 168
BLAST of FC923942 vs. ExPASy Swiss-Prot
Match: TIP41_YEAST (Type 2A phosphatase activator TIP41 OS=Saccharomyces cerevisiae GN=TIP41 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16 Identity = 60/188 (31.91%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 205 LRIRGWEIESRKRSILNSSSVERWE-QKLETNHLPEMVFGESCLVLKHVESGTKIHFNAFDALSGWKQEGLPPVEVPAAAQWKFRSKPFEQ------------------LILDYDYTFTTPYCGSETIEMDTDKHGTRDNLDGSSSLHWEDCKEKIDVVALASKEPILFYDEVVLYEDELADXGVSLL 711 + I W I SRK+ ILNS ++ WE +KL+ LPEM+FG + + +++ + I FNA DAL + + + V + W SK + +I YD+T+TT Y G+E+ S D +K+ + LA + ILFYD+++L+EDELAD G+S+L Sbjct: 92 ISINDWTISSRKKPILNSQELDIWENEKLKGLTLPEMIFGNNYIRIENSKQHWSIEFNALDALKEVQLQD-SGIRVAYSNDW-INSKKRQNSTNGAQRFTNDVNDDSLNIIHKYDWTYTTRYKGTES---------------SPESKFRLDNDQKLPLDKLAVHDKILFYDDMILFEDELADNGISIL 262
BLAST of FC923942 vs. ExPASy Swiss-Prot
Match: TIPRL_XENTR (TIP41-like protein OS=Xenopus tropicalis GN=tiprl PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15 Identity = 54/167 (32.34%), Postives = 91/167 (54.49%), Query Frame = 1 Query: 220 WEIESRKRSILNSSSVERWEQKLETNHLPEMVFGESCLVLKHVESGTKIHFNAFDALSGWKQEGLPPVEVPAAAQW---KFRSKPFEQLILDYDYTFTTPYCGSETIEMDTDKHGTRDNLDGSSSLHWEDCKEKIDVVALASKEPILFYDEVVLYEDELADXGVSLL 711 W++ + K I+ S+ E+ +++ LPEM+FG++ L ++H SG I FNA DAL K ++V A +W + S+ ++++ YD+T+TT Y G+ L + L+ +KI+ L ++E I+F++EV+L+EDEL D GVS L Sbjct: 18 WQLTAIKTHIMKSADAEKLAEEMSMPCLPEMMFGDNVLRIQHT-SGFGIEFNAKDALKVVKSNQAS-LKVACAEEWQESRSDSEHNKEVVKPYDWTYTTDYKGTL--------------LGDNMKLNVIPTTDKINTEKLKAREQIMFFEEVLLFEDELHDHGVSSL 168
BLAST of FC923942 vs. ExPASy Swiss-Prot
Match: TIPRL_RAT (TIP41-like protein OS=Rattus norvegicus GN=Tiprl PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.706e-14 Identity = 57/168 (33.93%), Postives = 89/168 (52.98%), Query Frame = 1 Query: 220 WEIESRKRSILNSSSVERWEQKLETNHLPEMVFGESCLVLKHVESGTKIHFNAFDALSGWKQ-EGLPPVEVPAAAQW---KFRSKPFEQLILDYDYTFTTPYCGSETIEMDTDKHGTRDNLDGSSSLHWEDCKEKIDVVALASKEPILFYDEVVLYEDELADXGVSLL 711 W++ + K I+ S+ VE+ +L LPEM+FG++ L ++H SG I FNA DAL +G+ ++V A +W + + +++I YD+T+TT Y G+ L S L + ID L ++E I F++EV+L+EDEL D GVS L Sbjct: 18 WKLTASKTHIMKSADVEKLADELHMPSLPEMMFGDNVLRIQH-GSGFGIEFNATDALRCVNNYQGM--LKVACAEEWQESRTEGEHSKEVIKPYDWTYTTDYKGTL--------------LGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSSL 168
BLAST of FC923942 vs. ExPASy Swiss-Prot
Match: TIPRL_MOUSE (TIP41-like protein OS=Mus musculus GN=Tiprl PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.706e-14 Identity = 57/168 (33.93%), Postives = 89/168 (52.98%), Query Frame = 1 Query: 220 WEIESRKRSILNSSSVERWEQKLETNHLPEMVFGESCLVLKHVESGTKIHFNAFDALSGWKQ-EGLPPVEVPAAAQW---KFRSKPFEQLILDYDYTFTTPYCGSETIEMDTDKHGTRDNLDGSSSLHWEDCKEKIDVVALASKEPILFYDEVVLYEDELADXGVSLL 711 W++ + K I+ S+ VE+ +L LPEM+FG++ L ++H SG I FNA DAL +G+ ++V A +W + + +++I YD+T+TT Y G+ L S L + ID L ++E I F++EV+L+EDEL D GVS L Sbjct: 18 WKLTASKTHIMKSADVEKLADELHMPSLPEMMFGDNVLRIQH-GSGFGIEFNATDALRCVNNYQGM--LKVACAEEWQESRTEGEHSKEVIKPYDWTYTTDYKGTL--------------LGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSSL 168
BLAST of FC923942 vs. ExPASy Swiss-Prot
Match: TIPRL_HUMAN (TIP41-like protein OS=Homo sapiens GN=TIPRL PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.706e-14 Identity = 57/168 (33.93%), Postives = 89/168 (52.98%), Query Frame = 1 Query: 220 WEIESRKRSILNSSSVERWEQKLETNHLPEMVFGESCLVLKHVESGTKIHFNAFDALSGWKQ-EGLPPVEVPAAAQW---KFRSKPFEQLILDYDYTFTTPYCGSETIEMDTDKHGTRDNLDGSSSLHWEDCKEKIDVVALASKEPILFYDEVVLYEDELADXGVSLL 711 W++ + K I+ S+ VE+ +L LPEM+FG++ L ++H SG I FNA DAL +G+ ++V A +W + + +++I YD+T+TT Y G+ L S L + ID L ++E I F++EV+L+EDEL D GVS L Sbjct: 18 WKLTASKTHIMKSADVEKLADELHMPSLPEMMFGDNVLRIQH-GSGFGIEFNATDALRCVNNYQGM--LKVACAEEWQESRTEGEHSKEVIKPYDWTYTTDYKGTL--------------LGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSSL 168 The following BLAST results are available for this feature:
BLAST of FC923942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923942 ID=FC923942; Name=FC923942; organism=Citrus clementina; type=EST; length=718bpback to top |