FC925225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.974e-32 Identity = 60/119 (50.42%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 201 KRECNSSEEDQQELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557 K+ CNS + E+R+GPWT+EED +L +YI HGEG WN +A+ AG LKRTGKSCRLRWLNYL+PD++RGN+TP+EQ LI+ELH+KWGNR Sbjct: 3 KKPCNSQDV---EVRKGPWTMEEDLILINYIANHGEGVWNSLARSAG-----------------------------LKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNR 89 HSP 2 Score: 35.8094 bits (81), Expect = 1.974e-32 Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 1 Query: 667 RWSKIAQCLPGRTDNEI 717 RWSKIA+ LPGRTDNEI Sbjct: 89 RWSKIAKTLPGRTDNEI 105
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.682e-32 Identity = 59/119 (49.58%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 201 KRECNSSEEDQQELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557 K+ CNS + E+R+GPWT+EED +L ++I HGEG WN +A+ AG LKRTGKSCRLRWLNYL+PD++RGN+TP+EQ LI+ELH+KWGNR Sbjct: 3 KKPCNSHDV---EVRKGPWTMEEDLILINFISNHGEGVWNTIARSAG-----------------------------LKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNR 89 HSP 2 Score: 35.039 bits (79), Expect = 5.682e-32 Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 1 Query: 667 RWSKIAQCLPGRTDNEI 717 RWSKIA+ LPGRTDNEI Sbjct: 89 RWSKIAKHLPGRTDNEI 105
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 7.585e-28 Identity = 52/109 (47.71%), Postives = 67/109 (61.47%), Query Frame = 3 Query: 231 QQELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557 Q+E R+GPWT +ED LL +++H G+ RW+ VAK +SGL RTGKSCRLRW+NYL P +KRG +TPQE+ L+LELH+KWGNR Sbjct: 5 QEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAK-----------------------------VSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNR 84 HSP 2 Score: 35.039 bits (79), Expect = 7.585e-28 Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 1 Query: 667 RWSKIAQCLPGRTDNEI 717 RWSKIA+ LPGRTDNEI Sbjct: 84 RWSKIARKLPGRTDNEI 100
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.915e-27 Identity = 60/124 (48.39%), Postives = 76/124 (61.29%), Query Frame = 3 Query: 186 RAAGTKRECNSSEEDQQELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557 R G+ SS E E+R+GPWT+EED +L +YI HG+G WN +AK AG LKRTGKSCRLRWLNYL+PD++RGN+TP+EQ +I+ELH+KWGNR Sbjct: 4 RGGGSSGGSGSSAE--AEVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAG-----------------------------LKRTGKSCRLRWLNYLRPDVRRGNITPEEQLIIMELHAKWGNR 96
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.793e-26 Identity = 49/105 (46.67%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 243 RRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557 R+GPWT +ED LL +++H G+ RW+ +AK +SGL RTGKSCRLRW+NYL P +KRG +TPQE+ L+LELH+KWGNR Sbjct: 8 RKGPWTEQEDILLVNFVHLFGDRRWDFIAK-----------------------------VSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNR 83 HSP 2 Score: 35.039 bits (79), Expect = 1.793e-26 Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 1 Query: 667 RWSKIAQCLPGRTDNEI 717 RWSKIA+ LPGRTDNEI Sbjct: 83 RWSKIARKLPGRTDNEI 99
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.002e-23 Identity = 47/109 (43.12%), Postives = 63/109 (57.80%), Query Frame = 3 Query: 231 QQELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557 ++E+R+GPWT +ED L + GE RW+ +AK +SGL RTGKSCRLRW+NYL P +KRG ++P E+ LILELH++WGNR Sbjct: 5 REEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAK-----------------------------VSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNR 84 HSP 2 Score: 33.8834 bits (76), Expect = 1.002e-23 Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = 1 Query: 667 RWSKIAQCLPGRTDNEI 717 RWS+IA+ LPGRTDNEI Sbjct: 84 RWSRIARRLPGRTDNEI 100
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.311e-23 Identity = 49/119 (41.18%), Postives = 65/119 (54.62%), Query Frame = 3 Query: 201 KRECNSSEEDQQELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557 K+ +S +E E ++G WT+EED +L Y+ HG+G WN +AK +GLKR GKSCRLRW+NYL P++KRGN T QE+ LI+ LH GNR Sbjct: 3 KKVSSSGDEGNNEYKKGLWTVEEDKILMDYVKAHGKGHWNRIAKK-----------------------------TGLKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNR 92 HSP 2 Score: 31.9574 bits (71), Expect = 1.311e-23 Identity = 14/22 (63.64%), Postives = 19/22 (86.36%), Query Frame = 1 Query: 652 LIGNFRWSKIAQCLPGRTDNEI 717 L+GN RWS IA+ +PGRTDN++ Sbjct: 88 LLGN-RWSLIAKRVPGRTDNQV 108
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.868e-23 Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 3 Query: 231 QQELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557 ++E+R+GPWT +ED L + G+ RW+ VAK +SGL RTGKSCRLRW+NYL P +K G ++P+E+ LI+ELH++WGNR Sbjct: 5 REEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAK-----------------------------VSGLNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNR 84 HSP 2 Score: 33.8834 bits (76), Expect = 4.868e-23 Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = 1 Query: 667 RWSKIAQCLPGRTDNEI 717 RWS+IA+ LPGRTDNEI Sbjct: 84 RWSRIARRLPGRTDNEI 100
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.958e-22 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 240 LRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557 ++RG WT EED +L++YI +GEG W + K AG LKR GKSCRLRW+NYL+ D+KRGN+TP+E+ L+++LHS GNR Sbjct: 12 IKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAG-----------------------------LKRCGKSCRLRWINYLRSDLKRGNITPEEEELVVKLHSTLGNR 88 HSP 2 Score: 31.9574 bits (71), Expect = 3.958e-22 Identity = 16/21 (76.19%), Postives = 17/21 (80.95%), Query Frame = 1 Query: 655 IGNFRWSKIAQCLPGRTDNEI 717 +GN RWS IA LPGRTDNEI Sbjct: 85 LGN-RWSLIAGHLPGRTDNEI 104
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.828e-22 Identity = 45/109 (41.28%), Postives = 59/109 (54.13%), Query Frame = 3 Query: 231 QQELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557 + E ++G WT+EED +L Y+ HG+G WN +AK +GLKR GKSCRLRW+NYL P++ RGN T QE+ LI+ LH GNR Sbjct: 9 EHEYKKGLWTVEEDKILMDYVRTHGQGHWNRIAKK-----------------------------TGLKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNR 88 HSP 2 Score: 31.9574 bits (71), Expect = 8.828e-22 Identity = 14/22 (63.64%), Postives = 19/22 (86.36%), Query Frame = 1 Query: 652 LIGNFRWSKIAQCLPGRTDNEI 717 L+GN RWS IA+ +PGRTDN++ Sbjct: 84 LLGN-RWSLIAKRVPGRTDNQV 104 The following BLAST results are available for this feature:
BLAST of FC925225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925225 ID=FC925225; Name=FC925225; organism=Citrus clementina; type=EST; length=719bpback to top |