FC925268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX4_CITSI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Citrus sinensis GN=CSA PE=1 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 6.358e-63 Identity = 114/115 (99.13%), Postives = 115/115 (100.00%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEG+VVERYAPTTSPLSIEK Sbjct: 44 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEK 158
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX4_MESCR (Probable phospholipid hydroperoxide glutathione peroxidase OS=Mesembryanthemum crystallinum GN=GPXMC1 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 9.202e-54 Identity = 96/115 (83.48%), Postives = 108/115 (93.91%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 TNSNY EL++LY++YK++GLEILAFPCNQFG QEPGDNEQI EFACTRFKAEFPIFDKVDVNG NAAP+YK+LKSSKGGLFGD IKWNF+KFLVD++G VV+RYAPTTSP SIEK Sbjct: 47 TNSNYPELTKLYEQYKDKGLEILAFPCNQFGNQEPGDNEQIMEFACTRFKAEFPIFDKVDVNGSNAAPVYKYLKSSKGGLFGDGIKWNFTKFLVDRDGKVVDRYAPTTSPASIEK 161
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX6_ARATH (Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial OS=Arabidopsis thaliana GN=GPX6 PE=2 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 5.965e-53 Identity = 95/115 (82.61%), Postives = 106/115 (92.17%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 TNSNYTEL+QLY+KYK G EILAFPCNQFG QEPG NE+I +FACTRFKAE+PIFDKVDVNGD AAP+YK LKSSKGGLFGD IKWNF+KFLVDK+G+VV+R+APTTSPLSIEK Sbjct: 108 TNSNYTELAQLYEKYKGHGFEILAFPCNQFGNQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDKAAPVYKFLKSSKGGLFGDGIKWNFAKFLVDKDGNVVDRFAPTTSPLSIEK 222
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX4_SPIOL (Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 2.960e-52 Identity = 92/115 (80.00%), Postives = 106/115 (92.17%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 TNSNYTE+++LY+KY+ GLEILAFPCNQFG QEPG NE++ EFACTRFKAE+PIFDKVDVNG NAAP+YK LKSSKGGLFGD +KWNF+KFLVDK+G+VV+RYAPTTSP SIEK Sbjct: 47 TNSNYTEMTELYEKYRELGLEILAFPCNQFGNQEPGSNEEVLEFACTRFKAEYPIFDKVDVNGSNAAPIYKFLKSSKGGLFGDGLKWNFTKFLVDKDGNVVDRYAPTTSPKSIEK 161
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX4_NICSY (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 3.866e-52 Identity = 93/115 (80.87%), Postives = 105/115 (91.30%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 TNSNYT+L+++Y KYK+QGLEILAFPCNQFG QEPG E+IQ CTRFKAE+PIFDKVDVNGDNAAPLYK LKSSKGG FGDSIKWNFSKFLVDKEG+VV+RY+PTT+P S+EK Sbjct: 46 TNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEK 160
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX4_TOBAC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 6.595e-52 Identity = 92/115 (80.00%), Postives = 105/115 (91.30%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 TNSNYT+++++Y KYK+QGLEILAFPCNQFG QEPG E+IQ CTRFKAE+PIFDKVDVNGDNAAPLYK LKSSKGG FGDSIKWNFSKFLVDKEG+VV+RY+PTT+P S+EK Sbjct: 46 TNSNYTDMTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEK 160
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX4_SOLLC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Solanum lycopersicum GN=GPXle-1 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.919e-51 Identity = 91/115 (79.13%), Postives = 104/115 (90.43%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 TNSNYT++++LY KYK+QGLEILAFPCNQFG QEPG+ E IQ+ CTRFKAE+PIFDKVDVNGDNAAPLY+ LKSSKGG FGD IKWNFSKFL+DKEG VV+RY+PTTSP S+EK Sbjct: 46 TNSNYTDMTELYKKYKDQGLEILAFPCNQFGGQEPGNIEDIQQMVCTRFKAEYPIFDKVDVNGDNAAPLYRFLKSSKGGFFGDGIKWNFSKFLIDKEGHVVDRYSPTTSPASMEK 160
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX4_GOSHI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 7.291e-51 Identity = 93/116 (80.17%), Postives = 104/116 (89.66%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD-NEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 TNSNYT+L+++Y KYK+QGLEILAFPCNQFG QEPG E IQ CTRFKAE+PIFDKVDVNGDNAAPLYK LKSSKGG FGDSIKWNFSKFLVDKEG+VV+RY+PTT+P S+EK Sbjct: 46 TNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEESIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEK 161
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX4_HELAN (Probable phospholipid hydroperoxide glutathione peroxidase OS=Helianthus annuus GN=GPXHA-2 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 1.053e-49 Identity = 91/115 (79.13%), Postives = 100/115 (86.96%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 TNSNY EL+ LY KYK+QG EILAFPCNQFG QEPG NE+IQ FACTRFKAE+P+F KV+VNG A PLYK LKSSKGG GDSIKWNF+KFLVD+EG VV+RYAPTTSPLSIEK Sbjct: 57 TNSNYPELTTLYQKYKDQGFEILAFPCNQFGGQEPGSNEEIQVFACTRFKAEYPVFSKVNVNGKEADPLYKFLKSSKGGFLGDSIKWNFTKFLVDREGKVVDRYAPTTSPLSIEK 171
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX7_ARATH (Putative glutathione peroxidase 7, chloroplastic OS=Arabidopsis thaliana GN=GPX7 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.164e-48 Identity = 88/114 (77.19%), Postives = 98/114 (85.96%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIE 343 T+SNY+ELSQLY+KYKNQG EILAFPCNQFG QEPG N +I++FACTRFKAEFPIFDKVDVNG + AP+YK LKS+ GG GD IKWNF KFLVDK+G VVERY PTTSP IE Sbjct: 111 TSSNYSELSQLYEKYKNQGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYKFLKSNAGGFLGDIIKWNFEKFLVDKKGKVVERYPPTTSPFQIE 224 The following BLAST results are available for this feature:
BLAST of FC925268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925268 ID=FC925268; Name=FC925268; organism=Citrus clementina; type=EST; length=348bpback to top |