FC925362
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: AB27B_ARATH (ABC transporter B family member 27 OS=Arabidopsis thaliana GN=ABCB27 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.574e-22 Identity = 52/66 (78.79%), Postives = 58/66 (87.88%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQLQ 199 EYLV DAMDSLM GRTVLVIAHRLSTV++AD VAV+SDGE+ E GTH+ELLS G+YT LVKRQLQ Sbjct: 571 EYLVQDAMDSLMAGRTVLVIAHRLSTVKTADCVAVISDGEVAEKGTHDELLSLNGIYTNLVKRQLQ 636
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: ABCB8_DANRE (ATP-binding cassette sub-family B member 8, mitochondrial OS=Danio rerio GN=abcb8 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQ 193 E +V +A+D GRTVL+IAHRLST+Q+AD + V+S+G IVE+GTH ELLSKGG+Y L+KRQ Sbjct: 645 ERVVQEALDRATTGRTVLIIAHRLSTIQAADLICVMSNGRIVEAGTHLELLSKGGLYAELIKRQ 708
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: ABCB8_PONAB (ATP-binding cassette sub-family B member 8, mitochondrial OS=Pongo abelii GN=ABCB8 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.171e-14 Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQ-LQEPKT 211 E +V +A+D GRTVLVIAHRLSTV+ A + V++DG + E+GTHEELL KGG+Y L++RQ L P+T Sbjct: 630 ERVVQEALDRASAGRTVLVIAHRLSTVRGAHRIVVMADGRVWEAGTHEELLKKGGLYAELIRRQALDAPRT 700
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: ABCB8_HUMAN (ATP-binding cassette sub-family B member 8, mitochondrial OS=Homo sapiens GN=ABCB8 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.171e-14 Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQ-LQEPKT 211 E +V +A+D GRTVLVIAHRLSTV+ A + V++DG + E+GTHEELL KGG+Y L++RQ L P+T Sbjct: 647 ERVVQEALDRASAGRTVLVIAHRLSTVRGAHCIVVMADGRVWEAGTHEELLKKGGLYAELIRRQALDAPRT 717
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: ABCB4_DICDI (ABC transporter B family member 4 OS=Dictyostelium discoideum GN=abcB4 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.171e-14 Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQLQE 202 E LV A+D+LMKGRT LVIAHRLSTVQ+AD + V+S G+I E G H EL++ G+Y LV+RQL + Sbjct: 698 ELLVQTALDNLMKGRTTLVIAHRLSTVQNADLIGVLSHGKIAEFGNHNELMNHKGLYYKLVQRQLSQ 764
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: ABCB8_RAT (ATP-binding cassette sub-family B member 8, mitochondrial OS=Rattus norvegicus GN=Abcb8 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.609e-14 Identity = 36/64 (56.25%), Postives = 52/64 (81.25%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQ 193 E +V +A+D GRTVLVIAHRLSTV++A ++ V+++G++ E+GTHEELL KGG+Y L++RQ Sbjct: 629 ERIVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCEAGTHEELLQKGGLYAELIRRQ 692
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: ABCB8_MOUSE (ATP-binding cassette sub-family B member 8, mitochondrial OS=Mus musculus GN=Abcb8 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.609e-14 Identity = 36/64 (56.25%), Postives = 53/64 (82.81%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQ 193 E +V +A+D GRTVLVIAHRLSTV++A ++ V+++G++ E+GTHEELL KGG+Y+ L++RQ Sbjct: 629 ERVVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCEAGTHEELLKKGGLYSELIRRQ 692
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: ABCBA_HUMAN (ATP-binding cassette sub-family B member 10, mitochondrial OS=Homo sapiens GN=ABCB10 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.813e-14 Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSK-GGVYTALVKRQ 193 EYLV +A+D LM GRTVLVIAHRLST+++A+ VAV+ G+I E G HEELLSK G+Y L+ +Q Sbjct: 669 EYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEELLSKPNGIYRKLMNKQ 733
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: ABCB1_DICDI (ABC transporter B family member 1 OS=Dictyostelium discoideum GN=abcB1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.813e-14 Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSK-GGVYTALVKRQL 196 EYLV A+D +MK RTV+VIAHRLSTV +A+TV V++ G+I E GTH+ELL+ G+Y LVKRQL Sbjct: 840 EYLVKQAIDEIMKDRTVIVIAHRLSTVINANTVVVINQGKIEEMGTHKELLNNTDGIYHNLVKRQL 905
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: ABCB2_DICDI (ABC transporter B family member 2 OS=Dictyostelium discoideum GN=abcB2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.691e-13 Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQ 193 E LV +++ LM GRT +VIAHRLST+Q AD +AVV G IVE GTH EL + GVYT LV RQ Sbjct: 648 ELLVQQSIEKLMIGRTTIVIAHRLSTIQDADQIAVVKGGAIVEIGTHPELYALNGVYTQLVNRQ 711 HSP 2 Score: 73.559 bits (179), Expect = 1.432e-12 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQL 196 E +V A+D++ KGRT +VIAHRLSTV AD + VV +G++VE GTHE LL++ G Y LV RQ+ Sbjct: 1333 EKVVQVALDNVSKGRTSIVIAHRLSTVIDADLIVVVKEGKVVELGTHETLLAENGFYAELVSRQM 1397 The following BLAST results are available for this feature:
BLAST of FC925362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925362 ID=FC925362; Name=FC925362; organism=Citrus clementina; type=EST; length=789bpback to top |