FC925387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925387 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.038e-41 Identity = 80/97 (82.47%), Postives = 90/97 (92.78%), Query Frame = 3 Query: 462 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRSFYNGRFHQRMRKK 752 LA+TL DGRRVHVIERD+TE DRIVGELLQPGGYLKL+ELGLEDCV EIDAQ+V GYAL+ DGK+TRLSYPLEKFH+DV+GRSF+NGRF QRMR+K Sbjct: 89 LAYTLANDGRRVHVIERDLTEQDRIVGELLQPGGYLKLIELGLEDCVNEIDAQRVFGYALYMDGKNTRLSYPLEKFHSDVAGRSFHNGRFVQRMREK 185
BLAST of FC925387 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.239e-26 Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 3 Query: 462 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLE--KFHADVSGRSFYNGRFHQRMRKK 752 LA+ L KDGRRVHVIERD+ EP+RI+GE +QPGG L L +LGLEDC+E IDAQ+ G ++KDGK S+P++ F D S RSF+NGRF QR+R+K Sbjct: 60 LAYALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQK 158
BLAST of FC925387 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.606e-26 Identity = 59/98 (60.20%), Postives = 75/98 (76.53%), Query Frame = 3 Query: 462 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLE-KFHADVSGRSFYNGRFHQRMRKK 752 LA+ L KDGRRVHVIERD+ EP R++GE +QPGG L L +LGL+DC+EEIDAQ+ G LFKDGK T +P++ F + SGR F+NGRF QR+R+K Sbjct: 63 LAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLMLSKLGLQDCLEEIDAQKSTGIRLFKDGKETVACFPVDTNFPYEPSGRFFHNGRFVQRLRQK 160
BLAST of FC925387 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25 Identity = 55/99 (55.56%), Postives = 76/99 (76.77%), Query Frame = 3 Query: 462 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLE--KFHADVSGRSFYNGRFHQRMRKK 752 LA+ L KDGRRVHVIERD+ EP+R++GE +QPGG L L +LGL+DC+E+IDAQ+ G A++KDGK +P++ F + S RSF+NGRF Q++R+K Sbjct: 60 LAYALAKDGRRVHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPSARSFHNGRFVQQLRRK 158
BLAST of FC925387 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.881e-25 Identity = 70/167 (41.92%), Postives = 92/167 (55.09%), Query Frame = 3 Query: 264 HYIAGTLIXXXXXXXXXXXXNDSKKPRKV---STTYKTQNDVFRSSVNAGKNGSPTDXXXXXXXXXXXXLAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEK-FHADVSGRSFYNGRFHQRMRKK 752 H TL+ N KK K+ +T + D V AG GS LA+ L KDGRRVHVIERD+ EP R++GE +QPGG L L +LGLEDC+E ID Q G A++KDG+ +S+P + F + +GR+FYNGRF QR+R+K Sbjct: 7 HVCLWTLLAFVLTWTVFYVNNRRKKVAKLPDAATEVRRDGDADVIIVGAGVGGSA--------------LAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLLLSKLGLEDCLEGIDEQIATGLAVYKDGQKALVSFPEDNDFPYEPTGRAFYNGRFVQRLRQK 159
BLAST of FC925387 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.364e-23 Identity = 54/98 (55.10%), Postives = 69/98 (70.41%), Query Frame = 3 Query: 462 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEK-FHADVSGRSFYNGRFHQRMRKK 752 LA+ L KDGRRVHVIERD+ EP R +GEL+Q GG L +LGLEDC+E+IDAQ+ A++KDGK L +P +K F + GR NGR QR+R+K Sbjct: 58 LAYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQK 155
BLAST of FC925387 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.269e-19 Identity = 61/134 (45.52%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 354 TTYKTQNDVFRSSVNAGKNGSPTDXXXXXXXXXXXXLAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALF-KDGKS-TRLSYPLEKFHADVSGRSFYNGRFHQRMRK 749 T+ +QND V AG GS L L +DGR+V VIERD+ EPDRIVGE LQPGGY L +LGL D VE +DAQ V GY + ++ KS ++ YPL + + SGR+F++GRF +RK Sbjct: 116 TSTSSQNDPEVIIVGAGVLGSA--------------LVAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEVQIPYPLSENNQVQSGRAFHHGRFIMSLRK 235
BLAST of FC925387 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.622e-18 Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 462 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYAL--FKDGKSTRLSYPLEKFHADVSGRSFYNGRFHQRMRK 749 LA L +DGR+V VIERD+ EPDRIVGELLQPGGY L ELGL D VE ++A + GY + ++ ++ YPL + + SG +F++GRF +RK Sbjct: 136 LAAVLSRDGRKVTVIERDLKEPDRIVGELLQPGGYRVLQELGLGDTVEGLNAHHIHGYIVHDYESRSEVQIPYPLSETNQVQSGIAFHHGRFIMSLRK 233
BLAST of FC925387 vs. ExPASy Swiss-Prot
Match: ERG1_SCHPO (Probable squalene monooxygenase OS=Schizosaccharomyces pombe GN=SPBC713.12 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.983e-16 Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 3 Query: 462 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRSFYNGRFHQRMRK 749 L LG+ GR+V V+ERD++EPDRIVGELLQPGG L ++G+ D VE ID Q GY +F + + YP + G F+ GRF +RK Sbjct: 20 LGAALGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGIADAVEGIDGQWTSGYQIFYGDSNVSVPYPSKPNGGAYQGIGFHYGRFVMNLRK 115
BLAST of FC925387 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.590e-16 Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 462 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALF--KDGKSTRLSYPLEKFHADVSGRSFYNGRFHQRMRK 749 LA L +DGR V VIERD+ EPDRI+GE LQPGGY L ELGL D VE ++A + GY + + ++ YP+ + + SG +F++G+F +RK Sbjct: 137 LATVLSRDGRTVTVIERDLKEPDRILGECLQPGGYRVLRELGLGDTVESLNAHHIHGYVIHDCESRSEVQIPYPVSENNQVQSGVAFHHGKFIMSLRK 234 The following BLAST results are available for this feature:
BLAST of FC925387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925387 ID=FC925387; Name=FC925387; organism=Citrus clementina; type=EST; length=753bpback to top |