FC925392
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925392 vs. ExPASy Swiss-Prot
Match: BLC_CITFR (Outer membrane lipoprotein blc OS=Citrobacter freundii PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.953e-17 Identity = 56/155 (36.13%), Postives = 82/155 (52.90%), Query Frame = 1 Query: 91 KEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGAD-TRATYTLNEDGAVHVRNETWSDGKR--GSIEGTAY-KADPKSDEAKLXXXXXXXXXXXXXXXXGNYWVLYIDDNYQYALIGEPTRKYLWILCREPHMDEAIYNQLVEKATSEGYDVSKL 543 K + VV D KRY+G WYEIA F R + G D ATY+L +DG ++V N+ ++ + EG AY DP + K+ G Y V+ +D Y++AL+ P R YLWIL R P + + + Q++ AT EG++V+KL Sbjct: 26 KGVTVVNNFDAKRYLGTWYEIARFDHRFE--RGLDKVTATYSLRDDGGINVINKGYNPDREMWQKTEGKAYFTGDPSTAALKVSFFGPFY---------GGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEMKQQMLAIATREGFEVNKL 169
BLAST of FC925392 vs. ExPASy Swiss-Prot
Match: YR877_MIMIV (Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R877 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.152e-16 Identity = 56/157 (35.67%), Postives = 81/157 (51.59%), Query Frame = 1 Query: 85 SKKEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGAVHVRNETWSDGKRGSIEGTAYKADPKSDEAKLXXXXXXXXXXXXXXXXGNYWVLYIDDNYQYALI--GEPTRKYLWILCREPHMDEAIYNQLVEKATSEGYDVSKLHR 549 SK+++ LDI+RYMG WYEIA P+ Q K ++ A Y L E + V N +G+ S+ GTA A + Y V++ID+NYQYA++ G T LWIL R +++++ YNQLV ++GYDV+ L R Sbjct: 18 SKRDVVSQSSLDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEINGRINSVTGTAIPA--ANTRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIVSGGNDT---LWILSRFKNINQSTYNQLVTIVYNQGYDVNNLIR 168
BLAST of FC925392 vs. ExPASy Swiss-Prot
Match: BLC_ECOLI (Outer membrane lipoprotein blc OS=Escherichia coli (strain K12) GN=blc PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15 Identity = 52/148 (35.14%), Postives = 75/148 (50.68%), Query Frame = 1 Query: 103 VVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGAVHVRNETWSD--GKRGSIEGTAYKADPKSDEAKLXXXXXXXXXXXXXXXXGNYWVLYIDDNYQYALIGEPTRKYLWILCREPHMDEAIYNQLVEKATSEGYDVSK 540 VV D KRY+G WYEIA F R + + ATY+L +DG ++V N+ ++ G EG AY + A G Y V+ +D Y++AL+ P R YLWIL R P + + + +++ AT EG+DVSK Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQSEGKAYFTGAPTRAA--------LKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSK 168
BLAST of FC925392 vs. ExPASy Swiss-Prot
Match: BLC_ECO57 (Outer membrane lipoprotein blc OS=Escherichia coli O157:H7 GN=blc PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15 Identity = 52/148 (35.14%), Postives = 75/148 (50.68%), Query Frame = 1 Query: 103 VVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGAVHVRNETWSD--GKRGSIEGTAYKADPKSDEAKLXXXXXXXXXXXXXXXXGNYWVLYIDDNYQYALIGEPTRKYLWILCREPHMDEAIYNQLVEKATSEGYDVSK 540 VV D KRY+G WYEIA F R + + ATY+L +DG ++V N+ ++ G EG AY + A G Y V+ +D Y++AL+ P R YLWIL R P + + + +++ AT EG+DVSK Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQSEGKAYFTGAPTRAA--------LKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSK 168
BLAST of FC925392 vs. ExPASy Swiss-Prot
Match: BLC_VIBCH (Outer membrane lipoprotein blc OS=Vibrio cholerae GN=blc PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11 Identity = 40/154 (25.97%), Postives = 73/154 (47.40%), Query Frame = 1 Query: 91 KEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGAVHVRNETWSD--GKRGSIEGTAYKADPKSDEAKLXXXXXXXXXXXXXXXXGNYWVLYID-DNYQYALIGEPTRKYLWILCREPHMDEAIYNQLVEKATSEGYDVSKL 543 + ++ V ++ Y+G+WYE+A + + + A Y + DG + V N +S+ G+ EG AY + +D G+Y V +D +NY YA + P +YLW+L R P ++ I ++ +E + G+D ++L Sbjct: 21 ESVKPVSDFELNNYLGKWYEVARL-DHSFERGLSQVTAEYRVRNDGGISVLNRGYSEEKGEWKEAEGKAYFVNGSTD--------GYLKVSFFGPFYGSYVVFELDRENYSYAFVSGPNTEYLWLLSRTPTVERGILDKFIEMSKERGFDTNRL 165
BLAST of FC925392 vs. ExPASy Swiss-Prot
Match: APOD_MOUSE (Apolipoprotein D OS=Mus musculus GN=Apod PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.927e-11 Identity = 51/164 (31.10%), Postives = 75/164 (45.73%), Query Frame = 1 Query: 103 VVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGAVHVRNETWS-DGKRGSIEGTAYKADPKSDEAKLXXXXXXXXXXXXXXXXGNYWVLYIDDNYQYALIGEPTR-------KYLWILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSDNP 570 V D+K+Y+GRWYEI P+ + G +A Y+L E+G + V N+ S DG ++G A K S+ AKL YW+L D YAL+ T ++WIL R P++ L + TS G D+ K+ T Q++ P Sbjct: 33 VQENFDVKKYLGRWYEIEKIPASFE--KGNCIQANYSLMENGNIEVLNKELSPDGTMNQVKGEA-KQSNVSEPAKL------EVQFFPLMPPAPYWIL-ATDYENYALVYSCTTFFWLFHVDFVWILGRNPYLPPETITYLKDILTSNGIDIEKMTTTDQANCP 186 The following BLAST results are available for this feature:
BLAST of FC925392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925392 ID=FC925392; Name=FC925392; organism=Citrus clementina; type=EST; length=860bpback to top |