FC929008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929008 vs. ExPASy Swiss-Prot
Match: FBK15_ARATH (F-box/kelch-repeat protein At1g26930 OS=Arabidopsis thaliana GN=At1g26930 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.195e-38 Identity = 73/144 (50.69%), Postives = 99/144 (68.75%), Query Frame = 1 Query: 367 SDSLLPGLVDDVALNCLAFACTSDYASLLFINKRFHKLIKSGYLYGLRKQLGIVEHWVYLVCDPRGWEAFDPMKKKWMALPKIPCDECFNHADKESLAVGSELLVFGRELFDFAIWKYSLVFRSWMKCEGMNHPRCLFGSSSLG 798 S +L+PG+ D +L+CL +DY S+ +N+ LI+SG +Y LR+ G +EHWVY C WEAFDP K+WM LP +P +ECF +ADKESLAVG++LLVFG E+ + I++YSL+ SW + MN PRCLFGS+S G Sbjct: 68 SGTLIPGMNRDDSLSCLIRCSRADYCSIASVNRSLRSLIRSGEIYRLRRLQGTLEHWVYFSCHLNEWEAFDPRSKRWMHLPSMPQNECFRYADKESLAVGTDLLVFGWEVSSYVIYRYSLLTNSWSTAKSMNMPRCLFGSASYG 211
BLAST of FC929008 vs. ExPASy Swiss-Prot
Match: FBK29_ARATH (F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana GN=At1g74510 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.194e-34 Identity = 68/137 (49.64%), Postives = 90/137 (65.69%), Query Frame = 1 Query: 388 LVDDVALNCLAFACTSDYASLLFINKRFHKLIKSGYLYGLRKQLGIVEHWVYLVCDPRGWEAFDPMKKKWMALPKIPCDECFNHADKESLAVGSELLVFGRELFDFAIWKYSLVFRSWMKCEGMNHPRCLFGSSSLG 798 L + LNCLA SD+ S+ N+ F LIK LY LR+ GIVEHW+Y C WEA+DP +W+ +PK+ +ECF +DKESLAVG+ELLVFG+E+ I++YS++ +W MN PRCLFGS+SLG Sbjct: 99 LDQNALLNCLAHCSLSDFGSIASTNRTFRSLIKDSELYRLRRAKGIVEHWIYFSCRLLEWEAYDPNGDRWLRVPKMTFNECFMCSDKESLAVGTELLVFGKEIMSHVIYRYSILTNTWTSGMQMNVPRCLFGSASLG 235
BLAST of FC929008 vs. ExPASy Swiss-Prot
Match: SKI11_ARATH (F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana GN=SKIP11 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 1.157e-33 Identity = 73/154 (47.40%), Postives = 97/154 (62.99%), Query Frame = 1 Query: 340 NDGCCRIGPSDSLLPGLVDDVALNCLAFACTSDYASLLFINKRFHKLIKSGYLYGLRKQLGIVEHWVYLVCDPRGWEAFDPMKKKWMALPKIPCDECFNHADKESLAVGSELLVFGRELF-DFAIWKYSLVFRSWMKCEGMNHPRCLFGSSSLG 798 ND S SL+ + D +++CL SDY S+ +N+ F L+KSG +Y LR+Q G VEHWVY C W AFDP++++WM LP +P F ADKESLAVG++LLV G++ F I++YSL+ SW MN PRCLFGS+SLG Sbjct: 105 NDNGGDSSDSHSLINEIGRDNSIDCLIRCSRSDYGSIASLNRNFRSLVKSGEIYRLRRQNGFVEHWVYFSCQLLEWVAFDPVERRWMQLPTMPSSVTFMCADKESLAVGTDLLVLGKDDFSSHVIYRYSLLTNSWSSGMKMNSPRCLFGSASLG 258
BLAST of FC929008 vs. ExPASy Swiss-Prot
Match: FBK70_ARATH (F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana GN=At3g27150 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.051e-19 Identity = 51/141 (36.17%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 379 LPGLVDDVALNCLAFACTSDYASLLFINKRFHKLIKSGYLYGLRKQLGIVEHWVYLVCD-PRGWEAFDPMKKKWMALPKIPCDECFNHADKESLAVGSELLVFGRELFDFAIWKYSLVFRSWMKCEGMNHPRCLFGSSSLG 798 +P LV ++ + LA +Y L +NK F +L+KS ++ +R++ G+VE V+++ W FD LP++P D CF H DKESL G+ L+V G+E A+W+Y L W K M PR LF S++ G Sbjct: 71 VPQLVYELEVEILARVPRFEYWKLKLLNKGFSRLLKSDEIFKVRRERGVVEPSVFMLSSGDTCWTMFDKGFGNCQKLPELPSDICFLHGDKESLCAGTHLIVTGKEEKSIALWRYELETSKWFKGPAMITPRILFASATCG 211
BLAST of FC929008 vs. ExPASy Swiss-Prot
Match: FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.179e-11 Identity = 39/110 (35.45%), Postives = 58/110 (52.73%), Query Frame = 1 Query: 376 LLPGLVDDVALNCLAFACTSDYASLLFINKRFHKLIKSGYLYGLRKQLGIVEHWVYLVCDPR----GWEAFDPMKKKWMALPKIPCDECFNHADKESLAV--GSELLVFG 687 LLPGL DD+A+ CL +++ L + KR+++L + Y RK LG+ E WVY+ R W FDP+ + W LP +P + ++ A AV G L +FG Sbjct: 78 LLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKRDRDGKISWNTFDPISQLWQPLPPVPRE--YSEAVGFGCAVLSGCHLYLFG 185 The following BLAST results are available for this feature:
BLAST of FC929008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929008 ID=FC929008; Name=FC929008; organism=Citrus clementina; type=EST; length=800bpback to top |