FC929960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929960 vs. ExPASy Swiss-Prot
Match: FATB_GOSHI (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum GN=FATB1 PE=1 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 6.569e-72 Identity = 128/183 (69.95%), Postives = 157/183 (85.79%), Query Frame = 1 Query: 4 IIRNAKSGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKDAHNFGNVGPIPAE 552 ++ N+++GE LTRATS+WVMMNKLTRRLSK+P+EVR EIEP+F+NSDPV+ EDS+KL KL DSTA++V +GLTP+WSDLDVNQHVNNVKYIGWILESAP ILESH+L+++TLEYRRECGRDSVLQSLT VSD + N VN+G CQHLLRL++GAE++R RT WRPK A + N+ I A+ Sbjct: 229 LVSNSETGEILTRATSVWVMMNKLTRRLSKIPEEVRGEIEPFFMNSDPVLAEDSQKLVKLDDSTAEHVCKGLTPKWSDLDVNQHVNNVKYIGWILESAPLPILESHELSALTLEYRRECGRDSVLQSLTTVSDSNTENAVNVGEFNCQHLLRLDDGAEIVRGRTRWRPKHAKSSANMDQITAK 411
BLAST of FC929960 vs. ExPASy Swiss-Prot
Match: FATB_CUPHO (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana GN=FATB1 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.382e-60 Identity = 110/170 (64.71%), Postives = 141/170 (82.94%), Query Frame = 1 Query: 4 IIRNAKSGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKD 513 +I + +GE LTRA+S+WVMMN+ TRRLSK+PDEVR EIEP+F++S PV+++D RKLPKL + TAD +R+GLTPRW+DLDVNQHVNNVKYIGWILES P ++LE+ +L S+TLEYRRECGR+SVL+SLTA+ G GS + QHLLRLE+G E+++ RTEWRPK+ Sbjct: 233 LISDCNTGEILTRASSVWVMMNQKTRRLSKIPDEVRNEIEPHFVDSPPVIEDDDRKLPKLDEKTADSIRKGLTPRWNDLDVNQHVNNVKYIGWILESTPPEVLETQELCSLTLEYRRECGRESVLESLTAMDPSGGG----YGS-QFQHLLRLEDGGEIVKGRTEWRPKN 397
BLAST of FC929960 vs. ExPASy Swiss-Prot
Match: FATB_CINCA (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cinnamomum camphora GN=FATB1 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.796e-57 Identity = 111/185 (60.00%), Postives = 139/185 (75.14%), Query Frame = 1 Query: 4 IIRNAKSGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKDAHNFGNVGPIPAEST 558 ++R+ K+GE LTR TSL VMMN TRRLSK+P+EVR EI P F+++ V DE+ +K KL DSTADY++ GLTPRW+DLD+NQHVNN+KY+ WILE+ P I ESH ++S T+EYRREC DSVLQSLT VS G G V C+HLL+LE G+EVLRA+TEWRPK +F + IPAES+ Sbjct: 202 LVRDCKTGEILTRCTSLSVMMNTRTRRLSKIPEEVRGEIGPAFIDNVAVKDEEIKKPQKLNDSTADYIQGGLTPRWNDLDINQHVNNIKYVDWILETVPDSIFESHHISSFTIEYRRECTMDSVLQSLTTVS----GGSSEAGLV-CEHLLQLEGGSEVLRAKTEWRPKLTDSFRGISVIPAESS 381
BLAST of FC929960 vs. ExPASy Swiss-Prot
Match: FATB_UMBCA (Lauroyl-acyl carrier protein thioesterase, chloroplastic OS=Umbellularia californica GN=FATB1 PE=1 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.869e-56 Identity = 110/183 (60.11%), Postives = 136/183 (74.32%), Query Frame = 1 Query: 4 IIRNAKSGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKDAHNFGNVGPIPAE 552 ++R+ K+GE LTR TSL V+MN TRRLS +PDEVR EI P F+++ V D++ +KL KL DSTADY++ GLTPRW+DLDVNQHVNN+KY+ W+ E+ P I ESH ++S TLEYRREC RDSVL+SLT VS G G V C HLL+LE G+EVLRARTEWRPK +F + IPAE Sbjct: 202 LVRDCKTGEILTRCTSLSVLMNTRTRRLSTIPDEVRGEIGPAFIDNVAVKDDEIKKLQKLNDSTADYIQGGLTPRWNDLDVNQHVNNLKYVAWVFETVPDSIFESHHISSFTLEYRRECTRDSVLRSLTTVS----GGSSEAGLV-CDHLLQLEGGSEVLRARTEWRPKLTDSFRGISVIPAE 379
BLAST of FC929960 vs. ExPASy Swiss-Prot
Match: FATA_CORSA (Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment) OS=Coriandrum sativum GN=FATA PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.680e-32 Identity = 79/189 (41.80%), Postives = 117/189 (61.90%), Query Frame = 1 Query: 4 IIRNAKSGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVV--DEDSRKLPKLG--DSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYRRECGRDSVLQSLTAVS-DKDIGNLVNLG--------------SVECQHLLRLE-EGAEVLRARTEWRPK 510 II++ + E + RATS WVMMN+ TRRL K+ D+VR E + + + +E+++ L K+ + A + R GL+PR +DLD+NQHVNNV YIGW+LES P+++L +H+L ++TL+YRREC D V+ SLT+ D+D +G S++ H LR+ +G E+ R RTEWR K Sbjct: 177 IIKDFATDEVIGRATSKWVMMNQDTRRLQKVSDDVRDEYLVFCPKTPRLSFPEENNKSLKKISKLEDPAQHSRLGLSPRRADLDMNQHVNNVAYIGWVLESIPKEVLYTHELETITLDYRRECQHDDVVDSLTSPEVDEDTAVTKIIGTNGHAAAATEARDDSLKFLHFLRVSGQGLEINRGRTEWRKK 365 The following BLAST results are available for this feature:
BLAST of FC929960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929960 ID=FC929960; Name=FC929960; organism=Citrus clementina; type=EST; length=701bpback to top |