FC929961
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929961 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.031e-32 Identity = 70/169 (41.42%), Postives = 100/169 (59.17%), Query Frame = 1 Query: 175 LGMASALETLCGQAFGAKRYHMLGIYMQRSWIVXXXXXXXXXXXXXXATPLLKLLGQPDDVAELSGTVAVWMIPLHFSFAFQFPLTRFLQCQLKNQVIAWVSLVGLLVNVLTSWLFVYVLDFGVVGAALALDISWWVLCF--GLYGYAAFGGCPLTWSGFSTQAFSGLW 675 LGMASA++T+CGQA+GA++Y +GI QR+ ++ + P+LK +GQ +A A MIP ++FA P+ RFLQ Q +A++SL L++ L +WL VLDFG++GAAL L SWW+L G+Y C TW+GFST+AF G+W Sbjct: 107 LGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMY-ILMSPNCKETWTGFSTRAFRGIW 274 HSP 2 Score: 31.187 bits (69), Expect = 3.031e-32 Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 3 Query: 6 FAGHLGDVELAAISIANTVIVGFNFGLLV 92 F GHLG ++LA SIA I G +G+++ Sbjct: 79 FTGHLGSLQLAGASIATVGIQGLAYGIML 107
BLAST of FC929961 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.812e-14 Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 1 Query: 178 GMASALETLCGQAFGAKRYHMLGIYMQRSWIVXXXXXXXXXXXXXXATPLLKLLGQPDDVAELSGTVAVWMIP-LHFSFAFQFPLTRFLQCQ--LKNQVIAWVSLVGLLVNVLTSWLFVYVLDFGVVGAALALDISWWVLCFGLYGYAAFGGCPL-TWSGFSTQAF 663 G+ASA +TL Q+FG K +G+ +QR ++ LL LL Q DVA L+ + IP L +F FQ TR+LQ Q + QVI V + +VNV + +Y LD GVVG+A A S + L L+ Y + + TW G++ + F Sbjct: 100 GLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPAAFLFQLQ-TRYLQSQGIIMPQVI--VGIAANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYVWWKRIHIHTWGGWTRECF 262 HSP 2 Score: 27.335 bits (59), Expect = 9.812e-14 Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 6 FAGHLGDVELAAISIANTVI 65 F GHLG VEL A+++A +V+ Sbjct: 71 FCGHLGKVELDAVTLAVSVV 90
BLAST of FC929961 vs. ExPASy Swiss-Prot
Match: YL47_SCHPO (Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe GN=SPAC323.07c PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 51/167 (30.54%), Postives = 76/167 (45.51%), Query Frame = 1 Query: 178 GMASALETLCGQAFGAKRYHMLGIYMQRSWIVXXXXXXXXXXXXXXATPLLKLLGQPDDVAELSGTVAVWMIPLHFSFAFQFPLTRFLQCQLKNQVIAWVSLVGLLVNVLTSWLFVY--VLDFGVVGAALALDISWWVLCFGLYGYAAFGGCPLTWSGFSTQAFSGL 672 G+ S+L+TL QAFGA + + + IY+QR ++ +L L Q VA L G I +A L R+LQ Q I +V +N+L ++L V+ + FG +GA +A+ ++W L Y F P+ W GFS QA L Sbjct: 147 GVISSLDTLATQAFGANKPYNVAIYLQRCLLILAVLHIPVALIWLNLEHILIFLHQDPMVAHLCGRYMRVFILAAPGYAVFEALKRYLQAQGIFTPITYVLCFAAPLNILLNYLLVWHPTIGFGFLGAPVAVATTFWFQSICLILYICFSSTPIPWPGFSRQALKNL 313
BLAST of FC929961 vs. ExPASy Swiss-Prot
Match: YD338_YEAST (Uncharacterized transporter YDR338C OS=Saccharomyces cerevisiae GN=YDR338C PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 47/165 (28.48%), Postives = 84/165 (50.91%), Query Frame = 1 Query: 178 GMASALETLCGQAFGAKRYHMLGIYMQRSWIVXXXXXXXXXXXXXXATPLLKLLGQPDDVAELSGTVAVWMIPLHFSFAFQFPLTRFLQCQLKNQVIAWVSLVGLLVNVLTSWLFVY--VLDFGVVGAALALDISWWVLCFGLYGYAAFGGCPLTWSGFSTQAFS 666 G+A++L+TLC QA+G+ R++ +G+++QR + PLL + ++ L+ +I ++ F L RFLQ Q +V + +NVL S+ V+ + G +GAA+A+ +++W++ F L YA + W GFS +AF+ Sbjct: 284 GIATSLDTLCPQAYGSGRFYSVGVHLQRCIAFSLVIYIPFAVMWWYSEPLLSYIIPEKELINLTSRFLRVLILGAPAYIFFENLKRFLQAQGIFDAGIYVLTICAPLNVLVSYTLVWNKYIGVGFIGAAIAVVLNFWLMFFLLLFYALYIDGRKCWGGFSRKAFT 448
BLAST of FC929961 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 51/164 (31.10%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 178 GMASALETLCGQAFGAKRYHMLGIYMQRSWIVXXXXXXXXXXXXXXATPLLKLLGQPDDVAELSGT-VAVWMIPLHFSFAFQFPLTRFLQCQLKNQVIAWVSLV----GLLVNVLTSWLFVYVLDFGVVGAALALDISWWVLCFGLYGYAAFGGC-PLTWSGFS 651 G+ASA +TL Q FG+ +G+ +QR ++ P+L + Q +VA LS V ++M L +F +Q R+LQ NQ I W ++ G ++N L +++F+++L+ GV G+A A IS + L LY Y + TW G+S Sbjct: 109 GLASACDTLISQTFGSNNLKRVGVILQRGILILLLACFPCWALLINTEPILLAVRQSPNVASLSQLYVKIFMPALPAAFMYQLQ-GRYLQ----NQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYIRWKNLHKATWDGWS 267
BLAST of FC929961 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 3.073e-11 Identity = 53/170 (31.18%), Postives = 78/170 (45.88%), Query Frame = 1 Query: 178 GMASALETLCGQAFGAKRYHMLGIYMQRSWIVXXXXXXXXXXXXXXATPLLKLLGQPDDVAELSGTVAVWMIPLHFSFAFQFPLTRFLQCQLK---NQVIAWVSLV----GLLVNVLTSWLFVYVLDFGVVGAALALDISWWVLCFGLYGYAAFGGCPL---TWSGFSTQ 657 G++SA +TL Q +G++ +G+ +QRS +V +L L Q DV+ L+ T IP P T Q+K NQ I +V LVN L ++LF++ L GV+G+ALA IS + L L+ Y G L TW G+S + Sbjct: 91 GLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPA-------LPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYIL--GKKLHQATWGGWSLE 251 HSP 2 Score: 27.7202 bits (60), Expect = 3.073e-11 Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 3 Query: 6 FAGHLGDVELAAISIANTVI----VGFNFGL 86 F GHLG +EL A+++A VI V FGL Sbjct: 62 FCGHLGKLELDAVTLAIAVINVTGVSVGFGL 92
BLAST of FC929961 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 3.988e-11 Identity = 45/166 (27.11%), Postives = 79/166 (47.59%), Query Frame = 1 Query: 178 GMASALETLCGQAFGAKRYHMLGIYMQRSWIVXXXXXXXXXXXXXXATPLLKLLGQPDDVAELSGTVAVWMIP-LHFSFAFQFPLTRFLQCQ--LKNQVIAWVSLVGLLVNVLTSWLFVYVLDFGVVGAALALDISWWVLCFGLYGYAAFGGCPL-TWSGFSTQAF 663 G+A A +TL Q FG ++GI +QR ++ +L L Q +V++L+ + +P L +F +Q L ++LQ Q + QV+ + + N L +++ +YVL GV+G+A A +S ++ L+ Y + TW G+S F Sbjct: 105 GLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQL-LAKYLQNQGIIYPQVL--TGFIANIFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGGWSQACF 267 HSP 2 Score: 30.0314 bits (66), Expect = 3.988e-11 Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 6 FAGHLGDVELAAISIANTVI 65 F GHLG VEL A+S+A T+I Sbjct: 76 FCGHLGKVELDAVSLAITII 95
BLAST of FC929961 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 8.721e-11 Identity = 51/170 (30.00%), Postives = 77/170 (45.29%), Query Frame = 1 Query: 178 GMASALETLCGQAFGAKRYHMLGIYMQRSWIVXXXXXXXXXXXXXXATPLLKLLGQPDDVAELSGTVAVWMIPLHFSFAFQFPLTRFLQCQLK---NQVIAWVSLV----GLLVNVLTSWLFVYVLDFGVVGAALALDISWWVLCFGLYGYAAFGGCPL---TWSGFSTQ 657 G++SA +TL Q +G++ +G+ +QRS ++ +L L Q DV+ L+ T IP P T Q+K NQ I +V LVN L ++LF++ L G +G+ALA IS + L L+ Y G L TW G+S + Sbjct: 91 GLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPA-------LPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGSALANLISQYTLALLLFFYIL--GKKLHQATWGGWSLE 251 HSP 2 Score: 27.7202 bits (60), Expect = 8.721e-11 Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 3 Query: 6 FAGHLGDVELAAISIANTVI----VGFNFGL 86 F GHLG +EL A+++A VI V FGL Sbjct: 62 FCGHLGKLELDAVTLAIAVINVTGVSVGFGL 92
BLAST of FC929961 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 8.722e-11 Identity = 45/162 (27.78%), Postives = 77/162 (47.53%), Query Frame = 1 Query: 178 GMASALETLCGQAFGAKRYHMLGIYMQRSWIVXXXXXXXXXXXXXXATPLLKLLGQPDDVAELSGTVAVWMIPLHFSFAFQFPLTRFLQCQLKNQVIAWVSLVGL---LVNVLTSWLFVYVLDFGVVGAALALDISWWVLCFGLYGYAAFGGC-PLTWSGFS 651 G++SA +TL Q +G++ +G+ +QR ++ +L L Q DV+ L+ T + IP + F T ++ L ++ + G+ LVN L +++F+Y L GV+G+ALA IS + L L+ Y + TW G+S Sbjct: 91 GLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIP---ALPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYILWRRLHQATWGGWS 249 HSP 2 Score: 26.1794 bits (56), Expect = 8.722e-11 Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 3 Query: 6 FAGHLGDVELAAISIANTVI 65 F GHLG +EL A+++A VI Sbjct: 62 FCGHLGKLELDAVTLAIAVI 81
BLAST of FC929961 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 8.724e-11 Identity = 48/161 (29.81%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 178 GMASALETLCGQAFGAKRYHMLGIYMQRSWIVXXXXXXXXXXXXXXATPLLKLLGQPDDVAELSGTVAVWMIP-LHFSFAFQFPLTRFL-QCQLKNQVIAWVSLVGLLVNVLTSWLFVYVLDFGVVGAALALDISWWVLCFGLYGYAAFGGC-PLTWSGFS 651 G++SA +TL Q +G++ +G+ +QR ++ +L L Q DV+ L+ T + IP L +F + + L Q + QVI ++ LVN L ++LF++ L GV+G+ALA IS + L L+ Y + TW G+S Sbjct: 90 GLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIA--ANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGGWS 248 HSP 2 Score: 26.1794 bits (56), Expect = 8.724e-11 Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 3 Query: 6 FAGHLGDVELAAISIANTVI 65 F GHLG +EL A+++A VI Sbjct: 61 FCGHLGKLELDAVTLAIAVI 80 The following BLAST results are available for this feature:
BLAST of FC929961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929961 ID=FC929961; Name=FC929961; organism=Citrus clementina; type=EST; length=680bpback to top |