FC929990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929990 vs. ExPASy Swiss-Prot
Match: Y5957_ARATH (Uncharacterized protein At5g39570 OS=Arabidopsis thaliana GN=At5g39570 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.819e-18 Identity = 74/166 (44.58%), Postives = 87/166 (52.41%), Query Frame = 2 Query: 2 SGYGRKP--EYESGYGSKPEFESGYGRKPE--YESGYGSKHDDGSGYGS---KPHESGYGRKPD--YESGYG--SKPEYE--SGYGRKPEYESG-----YGSKPEYESGYGRKPXXXXXXXXXXXXXXXKFERKSSHGRSDD--EEGYKKPSSYGYERRGDDDEHS 439 SGYGRKP EY SGYG + E E YGR+PE Y SGYG + + S YGS E YGR+P+ SGYG S+ EYE YGR E E G YG E E GY RKP RK S+GRS++ EEGY+KPS Y R + +E S Sbjct: 114 SGYGRKPESEYGSGYGGQTEVE--YGRRPEQSYGSGYGGRTETESEYGSGGGGRTEVEYGRRPESGLGSGYGGRSESEYERKPSYGRSEEQEEGYRKPSYGRSEEQEEGY-RKPSYGRSEEQEEGY------RKPSYGRSEEEQEEGYRKPS---YGRSEEQEEGS 267 HSP 2 Score: 79.7221 bits (195), Expect = 1.733e-14 Identity = 62/144 (43.06%), Postives = 77/144 (53.47%), Query Frame = 2 Query: 11 GRKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGSGYGSKPHESGYGRKPD--YESGYGSKPEYESGYGRKPEYESGYGSKPEYESGYGRKPXXXXXXXXXXXXXXXKFERKSSHGRSDD-EEGYKKPSSYGYERRGDDDE 433 G +P GYGS ESGYGRKPE E GSGYG + E YGR+P+ Y SGYG + E ES YG SG G + E E YGR+P ++ERK S+GRS++ EEGY+KPS Y R + +E Sbjct: 103 GERPN--PGYGS----ESGYGRKPESEY--------GSGYGGQT-EVEYGRRPEQSYGSGYGGRTETESEYG------SGGGGRTEVE--YGRRP-ESGLGSGYGGRSESEYERKPSYGRSEEQEEGYRKPS---YGRSEEQEE 219
BLAST of FC929990 vs. ExPASy Swiss-Prot
Match: IF2_CLOPH (Translation initiation factor IF-2 OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=infB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11 Identity = 32/100 (32.00%), Postives = 57/100 (57.00%), Query Frame = 2 Query: 8 YG-RKPEYESGYGSKPEFESGYG-RKPEYESGYGSKHDDGSGYGSKPH--ESGYG-RKPDYESGYGSKPEYESGYG-RKPEYESGYGSKPEYESGYGRKP 289 YG R+P+ + YG +P+ + YG R+P+ + YG + YG + + YG R+P + YG +P+ + +G R+P+ + GYG +P+ + YG +P Sbjct: 330 YGDRRPQGQGSYGDRPQGQGSYGDRRPQGQGSYGDRPQGQGNYGDRRPGGQGSYGDRRPQGQGSYGDRPQGQGNFGDRRPQGQGGYGGRPQGQGSYGGRP 429 HSP 2 Score: 67.3958 bits (163), Expect = 8.902e-11 Identity = 32/96 (33.33%), Postives = 55/96 (57.29%), Query Frame = 2 Query: 8 YG-RKPEYESGYGSKPEFESGYG-RKPEYESGYGSKHDDGSG-YGSKPHESG-YG-RKPDYESGYGSKPEYESGYGRKPEYESGYGSKPEYESGYG 280 YG R+P+ + YG +P+ + YG R+P + YG + G G YG +P G +G R+P + GYG +P+ + YG +P+ + GY + + + +G Sbjct: 351 YGDRRPQGQGSYGDRPQGQGNYGDRRPGGQGSYGDRRPQGQGSYGDRPQGQGNFGDRRPQGQGGYGGRPQGQGSYGGRPQGQGGYAGRSQGQGSFG 446
BLAST of FC929990 vs. ExPASy Swiss-Prot
Match: FP1_MYTGA (Adhesive plaque matrix protein OS=Mytilus galloprovincialis GN=FP1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11 Identity = 36/95 (37.89%), Postives = 44/95 (46.32%), Query Frame = 2 Query: 8 YGRKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGSGYGSKP-HESGYGRKPDYESGYGSKPEYESGYGRKPEYESGYGSKPEYESGYGRKP 289 Y KP Y + Y +KP + Y KP Y Y +K Y +KP + Y KP Y Y +KP Y Y KP Y Y +KP Y S Y KP Sbjct: 409 YKAKPRYPTTYKAKPSYPPTYKAKPSYPPTYKAKLSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKTKPSYPRTYKAKPSYSSTYKAKP 503 HSP 2 Score: 67.3958 bits (163), Expect = 8.902e-11 Identity = 36/95 (37.89%), Postives = 43/95 (45.26%), Query Frame = 2 Query: 8 YGRKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGSGYGSKP-HESGYGRKPDYESGYGSKPEYESGYGRKPEYESGYGSKPEYESGYGRKP 289 Y KP Y Y +KP + Y KP Y Y +K S Y +KP + Y KP Y Y +KP Y Y KP Y Y +KP Y Y KP Sbjct: 459 YKAKPSYPPTYKAKPSYPPTYKTKPSYPRTYKAKPSYSSTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKP 553 The following BLAST results are available for this feature:
BLAST of FC929990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929990 ID=FC929990; Name=FC929990; organism=Citrus clementina; type=EST; length=725bpback to top |