FC930086
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930086 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 386.726 bits (992), Expect = 5.474e-107 Identity = 174/215 (80.93%), Postives = 191/215 (88.84%), Query Frame = 1 Query: 4 HQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHHRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDW 648 H LP PLS+ +YWA+QGCILTGVWV+AHECGHHAFSDYQ LDD VGLILHS LLVPYFSWKYSH RHHSNTGSL+RDEVFVPKQK+ I WY+KYLNNP GRV+TL VTLTLGWPLYLA NVSGRPYDRFACH+DPYGPIYSDRERLQI+ISDAG+LA++Y L+ L AKGL +V C+YG PLLVVNGFLVLIT LQHTHP+LPHY SSEWDW Sbjct: 75 HLLPGPLSFRGMAIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVLTLAVTLTLGWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVVYGLFRLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYTSSEWDW 289
BLAST of FC930086 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 379.793 bits (974), Expect = 6.691e-105 Identity = 168/213 (78.87%), Postives = 186/213 (87.32%), Query Frame = 1 Query: 10 LPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHHRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDW 648 LP PLSYLAWP+YWA QGC+LTG+WV+AHECGHHAFSDYQWLDDTVGLI HS LLVPYFSWKYSH RHHSNTGSL+RDEVFVPKQK+AI WY KYLNNPLGR++ LTV LGWPLYLAFNVSGRPYD FACHF P PIY+DRERLQI++SDAGILA+ + LY AA+G+ + C+YG PLL+VN FLVLIT LQHTHPSLPHY SSEWDW Sbjct: 77 LPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQFVLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQGMASMICLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDW 289
BLAST of FC930086 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 369.392 bits (947), Expect = 9.044e-102 Identity = 166/214 (77.57%), Postives = 184/214 (85.98%), Query Frame = 1 Query: 10 LPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHHRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPY-DRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDW 648 LPHPLSY+AWP+YWA QG +LTGVWV+AHECGHHAFSDYQWLDDTVGLI HS LLVPYFSWKYSH RHHSNTGSL+RDEVFVPK+K+ I WY KYLNNPLGR + LTV TLGWPLY AFNVSGRPY + FACHF P PIY+DRERLQI++SDAGILA+ Y LY AA+G+ + C+YG PLL+VN FLVLIT LQHTHPSLPHY SSEWDW Sbjct: 77 LPHPLSYVAWPLYWACQGVVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFTLGWPLYWAFNVSGRPYPEGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLYRYAAAQGVASMVCLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDW 290
BLAST of FC930086 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 2.085e-98 Identity = 154/215 (71.63%), Postives = 180/215 (83.72%), Query Frame = 1 Query: 4 HQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHHRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDW 648 H LP P S +AWP+YW LQGC+LTGVWV+AHECGHHAFS YQW+DD VGL LHS LLVPYFSWK SH RHHSNTGSLDRDEVFVPK K+ + W++KYLNNPLGR ++L VTLT+GWP+YLAFNVSGRPYD FA H+ PY PIYS+RERL I++SD + ++ YSLY + KGLV++ C+YG PLL+VNGFLV IT LQHTH +LPHY SSEWDW Sbjct: 79 HLLPQPFSLIAWPIYWVLQGCLLTGVWVIAHECGHHAFSKYQWVDDVVGLTLHSTLLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWFSKYLNNPLGRAVSLLVTLTIGWPMYLAFNVSGRPYDSFASHYHPYAPIYSNRERLLIYVSDVALFSVTYSLYRVATLKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHFALPHYDSSEWDW 293
BLAST of FC930086 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 298.516 bits (763), Expect = 1.960e-80 Identity = 131/213 (61.50%), Postives = 162/213 (76.06%), Query Frame = 1 Query: 10 LPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHHRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDW 648 LP PL+YLAWP+YW Q ILTG+WV+ HECGHHAFSDYQW+DDTVG ILHS L+ PYFSWKYSH HH+NT SLD DEV++PK K + Y K LN+P GR++ + +T TLG+PLYL N+SG+ Y+RFA HFDP PI+ +RER Q+ +SD G+LA++Y + VAAKG +V CIYG P+L V F +IT L HTH SLPHY SSEW+W Sbjct: 70 LPAPLAYLAWPLYWFCQASILTGLWVIGHECGHHAFSDYQWVDDTVGFILHSFLMTPYFSWKYSHRNHHANTNSLDNDEVYIPKSKAKVALYYKVLNHPPGRLLIMFITFTLGFPLYLFTNISGKKYERFANHFDPMSPIFKERERFQVLLSDLGLLAVLYGVKLAVAAKGAAWVTCIYGIPVLGVFIFFDIITYLHHTHLSLPHYDSSEWNW 282
BLAST of FC930086 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 9.490e-51 Identity = 101/233 (43.35%), Postives = 135/233 (57.94%), Query Frame = 1 Query: 1 IHQLPHPL-SYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHHRHHSNTGSLDRDEVFVPKQKTAIGWYAK--------------YLNN--PLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDW 648 I + +PL YLAWP YW +QG + TG+WV+AHECGH +FS + L++TVG ILHS LLVPY SW+ SH +HH TG + +D+VFVPK ++ +G K +L+ P+ + + + GWP YL N SG+ Y R+ HF Y PI+ R I ISD G+LA + +L L+ V Y P L VN +LVLIT LQHT P LPHY W++ Sbjct: 80 IDKFENPLIRYLAWPAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKENAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQLSLLTVTKYYIVPYLFVNFWLVLITFLQHTDPKLPHYREGAWNF 312
BLAST of FC930086 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.239e-50 Identity = 101/233 (43.35%), Postives = 135/233 (57.94%), Query Frame = 1 Query: 1 IHQLPHPL-SYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHHRHHSNTGSLDRDEVFVPKQKTAIGWYAK--------------YLNN--PLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDW 648 I + +PL YLAWP YW +QG + TG+WV+AHECGH +FS + L++TVG ILHS LLVPY SW+ SH +HH TG + +D+VFVPK ++ +G K +L+ P+ + + + GWP YL N SG+ Y R+ HF Y PI+ R I ISD G+LA + +L L+ V Y P L VN +LVLIT LQHT P LPHY W++ Sbjct: 80 IDKFENPLIRYLAWPAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKESAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQLSLLTVTKYYIIPYLFVNFWLVLITFLQHTDPKLPHYREGAWNF 312
BLAST of FC930086 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.683e-31 Identity = 76/216 (35.19%), Postives = 112/216 (51.85%), Query Frame = 1 Query: 16 HPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHHRHHSNTGSLDRDEVFVP---KQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQH--THPSLPHYHSSEWDW 648 H S+L +P+YWA+QG + ++V+ H+CGH +FSD Q L++ VG ILHS +LVPY W+ SH HH N G+++ DE +VP K +G+ K+L + + L +P+YL G+ HF+PY ++ ER + S M L L A G + +F IYG P L+ +L +T L H LP Y EW + Sbjct: 71 HLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLLNNVVGHILHSAILVPYHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPL-------LAYPMYLMKRSPGKS----GSHFNPYSDLFQPHERKYVVTSTLCWTVMAALLLYLCTAFGSLQMFKIYGAPYLIFVMWLDFVTYLHHHGYEKKLPWYRGKEWSY 275
BLAST of FC930086 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.425e-30 Identity = 76/211 (36.02%), Postives = 109/211 (51.66%), Query Frame = 1 Query: 25 SYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHHRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTL-TLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQH--THPSLPHYHSSEWDW 648 S+ WP+YWA QG + ++V+ H+CGH +FSD L+ VG ILHS +LVPY W+ SH HH N G ++ DE +VP + Y K ++ R++ TV L L +PLYL + G+ HF+PY +++ ER I S M SL L G + V +YG P ++ +L +T L H LP Y EW + Sbjct: 78 SWFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPERV---YKKLPHST--RMLRYTVPLPMLAYPLYLCYRSPGKE----GSHFNPYSSLFAPSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSY 279
BLAST of FC930086 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.021e-28 Identity = 74/212 (34.91%), Postives = 107/212 (50.47%), Query Frame = 1 Query: 25 SYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHHRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLG-RVITLTVTL-TLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQH--THPSLPHYHSSEWDW 648 S+ WP+YW QG + ++V+ H+CGH +FSD L+ VG ILHS +LVPY W+ SH HH N G ++ DE +VP + Y N P R++ TV L L +P+YL + G+ HF+PY +++ ER I S M+ +L L V V +YG P ++ +L +T L H LP Y EW + Sbjct: 75 SWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKL------YKNLPHSTRMLRYTVPLPMLAYPIYLWYRSPGKE----GSHFNPYSSLFAPSERKLIATSTTCWSIMLATLVYLSFLVDPVTVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSY 276 The following BLAST results are available for this feature:
BLAST of FC930086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930086 ID=FC930086; Name=FC930086; organism=Citrus clementina; type=EST; length=650bpback to top |