FC930324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930324 vs. ExPASy Swiss-Prot
Match: C3H6_ORYSJ (Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=Os01g0258700 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20 Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 2 YVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELIS 190 Y Q G C++G ACK+DHPMG L YSPSA L+DMP+APYP+G SI TLAPSS S DLRPE IS Sbjct: 362 YAQNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPIAPYPIGFSIATLAPSSPSPDLRPEYIS 424
BLAST of FC930324 vs. ExPASy Swiss-Prot
Match: C3H5_ORYSJ (Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=Os01g0257400 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.884e-20 Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 2 YVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELI 187 Y Q G CKFGP CKFDHPMG LSYSPSASS+ D+P+APYP+ ++ +AP S+SSDLRPE + Sbjct: 354 YTQHGFCKFGPTCKFDHPMGTLSYSPSASSITDLPIAPYPLNYAVAPVAPPSSSSDLRPEYL 415
BLAST of FC930324 vs. ExPASy Swiss-Prot
Match: C3H32_ARATH (Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis thaliana GN=At2g47850 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16 Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 2 Query: 2 YVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTL--APSSASSDL 172 YVQ G CKFG CKFDHPMG + Y+PSASSLAD PVAPYPV S +G L APSS+S++L Sbjct: 344 YVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGALAAAPSSSSTEL 402
BLAST of FC930324 vs. ExPASy Swiss-Prot
Match: C3H58_ARATH (Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis thaliana GN=At5g18550 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16 Identity = 47/65 (72.31%), Postives = 51/65 (78.46%), Query Frame = 2 Query: 2 YVQRGVCKFGPACKFDHPMG--MLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELIS 190 + Q G+CKFGPACKFDH +G LSYSPS SSL DMPVAPYP SS+GTLAPSS SSD ELIS Sbjct: 354 FAQHGICKFGPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYP--SSLGTLAPSS-SSDQCTELIS 415
BLAST of FC930324 vs. ExPASy Swiss-Prot
Match: C3H34_ARATH (Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis thaliana GN=At3g06410 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 2 Query: 2 YVQRGVCKFGPACKFDHPMGM-LSYSPSASSLADMPVAPYPVGSS--IGTLAPSSASSDLRPELIS 190 + Q G+CKFGPACKFDH M LSYSPSASSL DMPVAPYP+GSS G+ AP S+S++ E ++ Sbjct: 362 FAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPVAPYPIGSSSLSGSSAPVSSSNEPTKEAVT 427 The following BLAST results are available for this feature:
BLAST of FC930324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930324 ID=FC930324; Name=FC930324; organism=Citrus clementina; type=EST; length=704bpback to top |