FC930333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37 Identity = 87/135 (64.44%), Postives = 97/135 (71.85%), Query Frame = 2 Query: 20 NWEELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 424 N +ELESLERQLDMSLKQIRSTRTQ MLD L +LQ KE L+EAN+TLKQR LMEG +N LQ +A+D GYG + Q QGD FFH LECEPTLQIGYQ DPI+V AGPS+NNYM GWLP Sbjct: 122 NSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQR-------------LMEGSTLN-LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQ-NDPITVGGAGPSVNNYMAGWLP 241
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.093e-36 Identity = 83/136 (61.03%), Postives = 94/136 (69.12%), Query Frame = 2 Query: 26 EELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGL-KPAQPQGDTFFHA--LECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 424 ++LE+LERQLD SLKQIRSTRTQ+MLD L +LQ KE LL EAN+ L+QR MEGYQ+N+LQLN SAED GYG GD F +ECEPTLQIGY DP SVVTAGPS+NNYM GWLP Sbjct: 126 KDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQR--------------MEGYQINSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPSMNNYMGGWLP 247
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27 Identity = 73/136 (53.68%), Postives = 88/136 (64.71%), Query Frame = 2 Query: 26 EELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCG-YGLKPAQPQ--GDTFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 424 +ELESLERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ L+L +GYQ+ LQLNP+ E+ YG Q Q FF LECEP LQIGYQ + AGPS+NNYM GWLP Sbjct: 126 KELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLR-------------LRLADGYQM-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ--DGMGAGPSVNNYMLGWLP 245
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.303e-26 Identity = 71/135 (52.59%), Postives = 87/135 (64.44%), Query Frame = 2 Query: 26 EELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQL-NPS-AEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPADPISVVTAGPSLNNYM-QGWL 421 +ELE LERQLD SL+QIRSTRTQ+MLD L +LQ +EQ+L EANKTLK+R E Q N Q+ +PS GYG +PAQ G+ F+H LECEPTLQIGY ++ TA ++NNYM GWL Sbjct: 122 KELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRR-------------FEESSQANQQQVWDPSNTHAVGYGRQPAQHHGEAFYHPLECEPTLQIGYHSDITMATATAS-TVNNYMPPGWL 242
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.465e-26 Identity = 72/138 (52.17%), Postives = 88/138 (63.77%), Query Frame = 2 Query: 26 EELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAED--CGYGLKPAQPQGDT---FFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 424 +ELE LERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ L+L +GYQ+ LQLNP+ ED YG Q Q ++ FF LECEP LQ+GYQ + AGPS NNYM GWLP Sbjct: 126 KELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLR-------------LRLADGYQM-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHG-MEAGPSENNYMLGWLP 248
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.909e-18 Identity = 58/136 (42.65%), Postives = 83/136 (61.03%), Query Frame = 2 Query: 26 EELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLME-GYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 424 +ELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++ H G Q+ E G + + P + +G G+ FFH L+ EPTLQIGY PA+ + + +N YM WLP Sbjct: 125 KELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHV--RGQQVWEQGCNLIGYERQPEVQQPLHG-------GNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.909e-18 Identity = 58/136 (42.65%), Postives = 83/136 (61.03%), Query Frame = 2 Query: 26 EELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLME-GYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 424 +ELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++ H G Q+ E G + + P + +G G+ FFH L+ EPTLQIGY PA+ + + +N YM WLP Sbjct: 125 KELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHV--RGQQVWEQGCNLIGYERQPEVQQPLHG-------GNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.292e-17 Identity = 46/72 (63.89%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 20 NWEELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVN 235 N +ELESLERQLDMSLKQIRSTRTQ MLD LT+ Q KE L+EAN+TLKQR LMEG Q+N Sbjct: 122 NSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQR-------------LMEGSQLN 180 HSP 2 Score: 29.261 bits (64), Expect = 1.292e-17 Identity = 15/31 (48.39%), Postives = 18/31 (58.06%), Query Frame = 3 Query: 255 VQKIVVMGLNQLNLRAIPSFTPWNVNPHCKL 347 + K+ M QL LRA+ SF W VN CKL Sbjct: 186 MHKLWAMAGKQLKLRAMASFILWIVNLLCKL 216
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.357e-17 Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 20 NWEELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR---TMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQP---ADPISVVTAGPSL--NNYMQGWL 421 N +ELE LERQLD SLKQ+R +TQYMLD L++LQ KE +L +AN+ L + + +RH G G++ ++ YG A QG + +LEC+PTLQIGY ++ ++V G S N Y+ GW+ Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRHHHIGG-----GWE------GGDQQNIAYGHPQAHSQG--LYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQGNGYIPGWM 249
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.644e-16 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 2 Query: 20 NWEELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR---TMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQP---ADPISVVTAGPSL--NNYMQGWL 421 N +ELE LERQLD SLKQ+RS +TQYMLD L++LQ+KEQ+L E N+ L + + +R G EG + N Y AQ QG + LEC PTLQ+GY ++ I+ T + N Y+ GW+ Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRSHHMGGGGGWEGGEQNVT----------YAHHQAQSQG--LYQPLECNPTLQMGYDNPVCSEQITATTQAQAQQGNGYIPGWM 250 The following BLAST results are available for this feature:
BLAST of FC930333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930333 ID=FC930333; Name=FC930333; organism=Citrus clementina; type=EST; length=669bpback to top |