FC930334
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 4.829e-33 Identity = 79/168 (47.02%), Postives = 99/168 (58.93%), Query Frame = 3 Query: 135 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELK-------RSSNKKYSKPIVDDDFEADFQGFKXXXXXXXXXXXXXXXXXLMMADIKPFTFSAGRK----------------SHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 MCGGAIIS +IPP R ++T E++WP+LK + SNK+ +DDDFEADFQGFK + ++KPF F+A K ++ V+ EQA+KS++RKRKNQYRGIRQRPWGKWAAEIRDP KG R WLGTF+T Sbjct: 1 MCGGAIISDFIPPP---RSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDD------VFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDT 159
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.107e-32 Identity = 79/162 (48.77%), Postives = 99/162 (61.11%), Query Frame = 3 Query: 135 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELKRS--SNKKYSKPI-----VDDDFEADFQGFKXXXXXXXXXXXXXXXXXLMMADIKPFTFSAGRK------SHGSTAVKHVE----QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 MCGGAIIS +IPP R +++T+E++WP+LK++ +KK SK D +FEADFQGFK + AD+KPF F++ K + GS K V A+KS RKRKNQYRGIRQRPWGKWAAEIRDP +G R+WLGTF T Sbjct: 1 MCGGAIISDFIPPP---RSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGD---VFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKT 156
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.248e-22 Identity = 66/158 (41.77%), Postives = 84/158 (53.16%), Query Frame = 3 Query: 135 MCGGAIISGYIPPTVPGRP---KKLTAEYLWPELKR----SSNKKYSKPIV---DDDFEADFQGFKXXXXXXXXXXXXXXXXXLMMADIKPFTFSAGRKSHGSTAVKHVE---QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 MCGGAII + G P ++ T LWPE K+ +++ V D+DFEADF+ F+ ++ +IKP F + + A KS +RKRKNQ+RGIRQRPWGKWAAEIRDP KGVRVWLGTFN+ Sbjct: 1 MCGGAIIHH-----LKGHPEGSRRATEGLLWPEKKKPRWGGGGRRHFGGFVEEDDEDFEADFEEFEVDSGDSDLELGEEDDDDVV--EIKPAAFKRALSRDNLSTITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNS 151
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 8.544e-22 Identity = 63/145 (43.45%), Postives = 73/145 (50.34%), Query Frame = 3 Query: 135 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELKRSSNKKYSKPIVDDDFEADFQGFKXXXXXXXXXXXXXXXXXLMMADIKPFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 MCGGAIIS Y P + +KLTAE LW EL S+ DF GF + + P + + AVK + + RKRKN YRGIR+RPWGKWAAEIRDP KGVRVWLGTFNT Sbjct: 1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAAD-------------DFWGF------------------YSTSKLHP----TNQVNVKEEAVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNT 110
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.012e-14 Identity = 34/43 (79.07%), Postives = 39/43 (90.70%), Query Frame = 3 Query: 441 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 ++ +R+RKN YRGIRQRPWGKWAAEIRDP+KGVRVWLGTF T Sbjct: 39 ERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKT 81
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.250e-13 Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = 3 Query: 381 TFSAGRKSHGSTAVKHVEQAKKSTERK-RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 T S+ R+ S K E K +RK +KN YRG+RQRPWGK+AAEIRDP + RVWLGTF T Sbjct: 104 TSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFET 167
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.468e-13 Identity = 29/39 (74.36%), Postives = 37/39 (94.87%), Query Frame = 3 Query: 453 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 ++K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT Sbjct: 18 KKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNT 56
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12 Identity = 33/65 (50.77%), Postives = 44/65 (67.69%), Query Frame = 3 Query: 375 PFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 P +F+ SH + + +A R++K +YRG+RQRPWGKWAAEIRDP + RVWLGTF+T Sbjct: 45 PSSFARVDSSHNPIE-ESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDT 108
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 3 Query: 432 EQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 +Q + ++ R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF T Sbjct: 25 DQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFET 70
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 4.699e-12 Identity = 35/54 (64.81%), Postives = 38/54 (70.37%), Query Frame = 3 Query: 408 GSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 GS K E + S ER +K YRG+RQRPWGKWAAEIRDP K RVWLGTF T Sbjct: 42 GSAVTKECESSM-SLERPKK--YRGVRQRPWGKWAAEIRDPHKATRVWLGTFET 92 The following BLAST results are available for this feature:
BLAST of FC930334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930334 ID=FC930334; Name=FC930334; organism=Citrus clementina; type=EST; length=626bpback to top |